BLASTX nr result
ID: Coptis24_contig00011434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011434
(937 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [... 145 1e-32
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2... 142 1e-31
ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin... 136 6e-30
ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817... 135 1e-29
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2... 135 1e-29
>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
TSR2, putative [Ricinus communis]
Length = 213
Score = 145 bits (367), Expect = 1e-32
Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 7/189 (3%)
Frame = -2
Query: 783 EGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFAQSKGPLYIDVLEDLLFVN 604
EGI LILSRW+ALQ+AV+NEWGGR SRQ ++ + DI ++F QSK PLYID LE++L
Sbjct: 29 EGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLENILDEG 88
Query: 603 TGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXATNMD 424
LN ++EDGS+EEVAE+LMI+H+E L ++ IE+L A D
Sbjct: 89 MIS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANGDD 147
Query: 423 ETDGESS-------GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPETVEVEDGWTVV 265
+ D +SS GD S+M +D P + P M+V+E Q+ +VED WTV+
Sbjct: 148 DEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQE----AQVEDEWTVI 203
Query: 264 PSRRNQGKR 238
S++N+GKR
Sbjct: 204 SSKKNRGKR 212
>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
predicted protein [Populus trichocarpa]
Length = 212
Score = 142 bits (358), Expect = 1e-31
Identities = 83/186 (44%), Positives = 113/186 (60%), Gaps = 4/186 (2%)
Frame = -2
Query: 783 EGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFAQSKGPLYIDVLEDLLFVN 604
EGI LILS+W+ALQ+AV+NEWGGR S +E LASDI ++F QSK PLYID LE ++
Sbjct: 31 EGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYIDDLESIM-DE 89
Query: 603 TGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXATNMD 424
LN ++EDGS+EEVAE+LMI+H+E L ++ I+KL + D
Sbjct: 90 AMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVEDDD 149
Query: 423 ETDGESS----GDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPETVEVEDGWTVVPSR 256
+++ S GD+ S+M VD P +L V+E ++ + EDGWTVV SR
Sbjct: 150 DSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKE----AQSEDGWTVVSSR 205
Query: 255 RNQGKR 238
RN+GKR
Sbjct: 206 RNKGKR 211
>ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max]
gi|255641901|gb|ACU21219.1| unknown [Glycine max]
Length = 201
Score = 136 bits (343), Expect = 6e-30
Identities = 83/188 (44%), Positives = 114/188 (60%), Gaps = 6/188 (3%)
Frame = -2
Query: 783 EGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFAQSKGPLYIDVLEDLLFVN 604
EGI L+LSRW+AL+ AV+NEWGGR SR K++ LAS ILN+F +SK PLYID LED+L
Sbjct: 17 EGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTRSKEPLYIDDLEDILDQG 76
Query: 603 TGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXATNMD 424
LN+ VEDGS+EEVAE+LM++H+E L F+ E L N D
Sbjct: 77 MLS-LNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDL-RKANLEQATLPHVTQIANED 134
Query: 423 ETDGESSGDEASDMTVDEPSSRL-----APKSEIMRVDEQQLQQQPE-TVEVEDGWTVVP 262
+TD GD+ M VD+ SS++ S + V+ + P+ + E +DGW VV
Sbjct: 135 DTD--EDGDDDEKMIVDDNSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVVVS 192
Query: 261 SRRNQGKR 238
+RRN+G++
Sbjct: 193 NRRNKGRK 200
>ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max]
Length = 203
Score = 135 bits (341), Expect = 1e-29
Identities = 79/188 (42%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
Frame = -2
Query: 783 EGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFAQSKGPLYIDVLEDLLFVN 604
EGI L+L RW+ L AV+NEWGG SR K++ LASDIL++F QSK PLYID LED+L
Sbjct: 17 EGIGLVLFRWSTLLTAVENEWGGHESRVKADQLASDILSWFTQSKEPLYIDDLEDILDQG 76
Query: 603 TGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXATNMD 424
LN+ VEDGSIEEVAE+LM++H+E L D F+ E L N D
Sbjct: 77 MLS-LNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENL-RKANLEHAARPPVPQIVNDD 134
Query: 423 ETDGESSGDEASDMTVDEPSSRLAPKSEIMRVDEQQLQQQPE------TVEVEDGWTVVP 262
E D + +M VD+ SS + P++ + + + + E +DGW VV
Sbjct: 135 EDDTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVVVS 194
Query: 261 SRRNQGKR 238
+RRN+G++
Sbjct: 195 NRRNKGRK 202
>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
predicted protein [Populus trichocarpa]
Length = 213
Score = 135 bits (341), Expect = 1e-29
Identities = 83/188 (44%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Frame = -2
Query: 783 EGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFAQSKGPLYIDVLEDLLFVN 604
EGI LILS+W+ALQ+AV+NEWGGR S +E LASDIL++F QSK PL+ID LE +L
Sbjct: 32 EGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFIDDLEGIL-DE 90
Query: 603 TGEYLNMVVEDGSIEEVAEELMILHDELLHDTFNFIEKLXXXXXXXXXXXXXXXXATNMD 424
LN +++DGSIEEVAE+LMI+H+E L ++ I+KL + D
Sbjct: 91 AMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQAVDSDD 150
Query: 423 ETD----GESSGDEASDMTVDEP--SSRLAPKSEIMRVDEQQLQQQPETVEVEDGWTVVP 262
+++ + GD+ S+M VD P S++ P ++ + V + Q EDGWTVV
Sbjct: 151 DSEDSGNDDKMGDDESNMMVDAPEFQSKMYPVNKPVNVPRAKEAQS------EDGWTVVS 204
Query: 261 SRRNQGKR 238
SRRN+ KR
Sbjct: 205 SRRNKDKR 212