BLASTX nr result

ID: Coptis24_contig00011427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011427
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612133.1| Kinesin-related protein [Medicago truncatula...    86   4e-15
ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250...    83   2e-14
emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinife...    83   2e-14
ref|XP_002448243.1| hypothetical protein SORBIDRAFT_06g023880 [S...    82   4e-14
dbj|BAJ95863.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   6e-14

>ref|XP_003612133.1| Kinesin-related protein [Medicago truncatula]
            gi|355513468|gb|AES95091.1| Kinesin-related protein
            [Medicago truncatula]
          Length = 963

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
 Frame = -2

Query: 438  LNTKQRRLQLVRHLFTDTENMEHINECASLVAKLIGFVEPGNALKEMFGLSFAP--TSEK 265
            L++K RRLQL  HL+TDT N++HI E A++VAKL+G VEP  ALKEMFGL+FAP  TS K
Sbjct: 890  LSSKHRRLQLAHHLWTDTNNIDHIRESAAVVAKLVGPVEPEQALKEMFGLNFAPRSTSRK 949

Query: 264  SYSW 253
            S+SW
Sbjct: 950  SFSW 953


>ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250389 [Vitis vinifera]
          Length = 957

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
 Frame = -2

Query: 438  LNTKQRRLQLVRHLFTDTENMEHINECASLVAKLIGFVEPGNALKEMFGLSFAP--TSEK 265
            L++K+RRLQL + L+++T +M H+NE A++VAKLI FVE G ALKEMFGLSF P  T  +
Sbjct: 886  LDSKRRRLQLAQRLWSNTTDMSHVNESAAIVAKLIKFVEQGQALKEMFGLSFTPHRTRRR 945

Query: 264  SYSWKH 247
            SY WKH
Sbjct: 946  SYGWKH 951


>emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera]
            gi|297744725|emb|CBI37987.3| unnamed protein product
            [Vitis vinifera]
          Length = 969

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
 Frame = -2

Query: 438  LNTKQRRLQLVRHLFTDTENMEHINECASLVAKLIGFVEPGNALKEMFGLSFAP--TSEK 265
            L++K+RRLQL + L+++T +M H+NE A++VAKLI FVE G ALKEMFGLSF P  T  +
Sbjct: 898  LDSKRRRLQLAQRLWSNTTDMSHVNESAAIVAKLIKFVEQGQALKEMFGLSFTPHRTRRR 957

Query: 264  SYSWKH 247
            SY WKH
Sbjct: 958  SYGWKH 963


>ref|XP_002448243.1| hypothetical protein SORBIDRAFT_06g023880 [Sorghum bicolor]
            gi|241939426|gb|EES12571.1| hypothetical protein
            SORBIDRAFT_06g023880 [Sorghum bicolor]
          Length = 941

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
 Frame = -2

Query: 438  LNTKQRRLQLVRHLFTDTENMEHINECASLVAKLIGFVEPGNALKEMFGLSFAP---TSE 268
            L++K+RRLQ+ R L+T+T+N+EH+ E ASLVA+LIG +EPG AL+EMFGLSFAP   T  
Sbjct: 869  LSSKRRRLQVARRLWTETKNLEHVRESASLVARLIGLLEPGKALREMFGLSFAPQQFTRR 928

Query: 267  KSYSWKH 247
               SW++
Sbjct: 929  SHSSWRY 935


>dbj|BAJ95863.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 936

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/67 (59%), Positives = 56/67 (83%), Gaps = 3/67 (4%)
 Frame = -2

Query: 438  LNTKQRRLQLVRHLFTDTENMEHINECASLVAKLIGFVEPGNALKEMFGLSFAPT--SEK 265
            L++K+RRLQ+ R L+T+T+N+EH+ E ASLVA+LIG +EPG AL+EMFGLSFAP   S +
Sbjct: 864  LSSKRRRLQVARRLWTETKNLEHVRESASLVARLIGLLEPGKALREMFGLSFAPQQFSRR 923

Query: 264  SY-SWKH 247
            S+ SW++
Sbjct: 924  SHNSWRY 930


Top