BLASTX nr result

ID: Coptis24_contig00011424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011424
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|2...   219   9e-55
gb|AFK46999.1| unknown [Lotus japonicus]                              218   2e-54
ref|XP_002532339.1| protein translocase, putative [Ricinus commu...   215   2e-53
ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycin...   213   6e-53
ref|NP_001236363.1| uncharacterized protein LOC100527715 [Glycin...   211   3e-52

>ref|XP_002331044.1| predicted protein [Populus trichocarpa] gi|222872974|gb|EEF10105.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  219 bits (558), Expect = 9e-55
 Identities = 106/154 (68%), Positives = 127/154 (82%)
 Frame = +2

Query: 74  MDPSELRYLEDYDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 253
           MDPSE+RYLED DTP+MKTIKGAT GLV+G+IWGT+VATW DVPRVE+SVALPGLI+T+K
Sbjct: 1   MDPSEMRYLEDDDTPMMKTIKGATMGLVSGTIWGTIVATWHDVPRVEKSVALPGLIRTIK 60

Query: 254 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 433
           +MGNHG+TFAAIGGV+IGVEQLVQHYR+KRD              +LG + R+I  A++A
Sbjct: 61  MMGNHGVTFAAIGGVYIGVEQLVQHYRMKRDFINGAVGGFVAGSTILGFKGRNIKNAIAA 120

Query: 434 GAALAFTSAVLDIGGQKTRVETGKEYSALTTKKR 535
           GAALA TSA++D GGQ TR++TGKEY   TTKKR
Sbjct: 121 GAALAVTSAIIDAGGQTTRMDTGKEYYPYTTKKR 154


>gb|AFK46999.1| unknown [Lotus japonicus]
          Length = 162

 Score =  218 bits (554), Expect = 2e-54
 Identities = 110/156 (70%), Positives = 128/156 (82%)
 Frame = +2

Query: 74  MDPSELRYLEDYDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 253
           +DP+ELRYLE+ D+ +MKTIKGATTGLVAG+IWGTVVATW DVPRVER+VALPGLI+T K
Sbjct: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63

Query: 254 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 433
           +MGNHGLTFAAIGGV+IGVEQLVQ++R KRD              +LG + RSI TALSA
Sbjct: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNGAVGGFVAGAAILGYKGRSISTALSA 123

Query: 434 GAALAFTSAVLDIGGQKTRVETGKEYSALTTKKRPS 541
           G+ALAFTSAVLD GGQ  + + GKEY+A TTKKRPS
Sbjct: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPS 159


>ref|XP_002532339.1| protein translocase, putative [Ricinus communis]
           gi|223527956|gb|EEF30041.1| protein translocase,
           putative [Ricinus communis]
          Length = 159

 Score =  215 bits (547), Expect = 2e-53
 Identities = 105/154 (68%), Positives = 124/154 (80%)
 Frame = +2

Query: 74  MDPSELRYLEDYDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 253
           MDPSELRYLED DTP MKTIKGAT GL AG++WGT+VATW DVPRVE+ VALPGLI+T+K
Sbjct: 1   MDPSELRYLEDNDTPTMKTIKGATMGLAAGTLWGTIVATWHDVPRVEKHVALPGLIRTVK 60

Query: 254 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 433
           +MGN+GLTFAAIGGV+IGVEQL+QH+R+KRD              V+G + RSI TA+SA
Sbjct: 61  MMGNYGLTFAAIGGVYIGVEQLIQHFRMKRDFVNGTVGGFVAGASVIGFKGRSISTAMSA 120

Query: 434 GAALAFTSAVLDIGGQKTRVETGKEYSALTTKKR 535
           GAALA TSA++D GGQ TR++ GKEY   TTKKR
Sbjct: 121 GAALAVTSALIDAGGQTTRIDNGKEYYPYTTKKR 154


>ref|NP_001236744.1| uncharacterized protein LOC100499840 [Glycine max]
           gi|255627053|gb|ACU13871.1| unknown [Glycine max]
          Length = 160

 Score =  213 bits (542), Expect = 6e-53
 Identities = 108/157 (68%), Positives = 127/157 (80%)
 Frame = +2

Query: 74  MDPSELRYLEDYDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 253
           +D +E RYLED D+ +MKTIKGATTGLVAG+IWGTVVATW DVPRVER+VALPGLI+T K
Sbjct: 2   VDAAERRYLEDDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 61

Query: 254 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 433
           +MGN+GLTFAAIGGV+IGVEQLVQ+YR+KRD              +LG + RSI TALSA
Sbjct: 62  MMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSIKTALSA 121

Query: 434 GAALAFTSAVLDIGGQKTRVETGKEYSALTTKKRPSS 544
           G+ALAFTSA LD G Q  + +TGKEY+A TTKKRPS+
Sbjct: 122 GSALAFTSAFLDFGDQTIKHDTGKEYAAYTTKKRPST 158


>ref|NP_001236363.1| uncharacterized protein LOC100527715 [Glycine max]
           gi|255633032|gb|ACU16871.1| unknown [Glycine max]
          Length = 160

 Score =  211 bits (536), Expect = 3e-52
 Identities = 106/157 (67%), Positives = 127/157 (80%)
 Frame = +2

Query: 74  MDPSELRYLEDYDTPVMKTIKGATTGLVAGSIWGTVVATWLDVPRVERSVALPGLIKTLK 253
           +D +E RYLED D+ +MKTIKGATTGLVAG+IWGTVVATW DVPRVER+VALPGLI+T++
Sbjct: 2   VDAAERRYLEDDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTIR 61

Query: 254 LMGNHGLTFAAIGGVFIGVEQLVQHYRVKRDXXXXXXXXXXXXXIVLGLQARSIPTALSA 433
           +MGN+GLTFAAIGGV+IGVEQLVQ+YR+KRD              +LG + RSI TALSA
Sbjct: 62  MMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSIKTALSA 121

Query: 434 GAALAFTSAVLDIGGQKTRVETGKEYSALTTKKRPSS 544
           G+ALAFTSA LD G Q  + + GKEY+A TTKKRPS+
Sbjct: 122 GSALAFTSAFLDFGDQTLKHDAGKEYAAYTTKKRPST 158


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