BLASTX nr result
ID: Coptis24_contig00011417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011417 (805 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADH84008.1| putative ribosomal S23 protein [Wolffia arrhiza] 177 7e-54 emb|CBI32689.3| unnamed protein product [Vitis vinifera] 177 2e-53 sp|Q9M5Z9.1|RS23_EUPES RecName: Full=40S ribosomal protein S23 g... 177 2e-53 gb|ACF06519.1| 40S ribosomal protein S23 [Elaeis guineensis] 177 2e-53 gb|AFK48775.1| unknown [Lotus japonicus] 177 3e-53 >gb|ADH84008.1| putative ribosomal S23 protein [Wolffia arrhiza] Length = 142 Score = 177 bits (448), Expect(2) = 7e-54 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = -2 Query: 513 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 334 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI Sbjct: 55 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 114 Query: 333 PGVRFKVVKVSGVSLLALFKEKKEKPRS 250 PGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 115 PGVRFKVVKVSGVSLLALFKEKKEKPRS 142 Score = 60.5 bits (145), Expect(2) = 7e-54 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -3 Query: 710 MGKTRGMGAARKLKTHRRTQRWADKSYK 627 MGKTRGMGAARKLK HRRTQRWADKSYK Sbjct: 1 MGKTRGMGAARKLKNHRRTQRWADKSYK 28 >emb|CBI32689.3| unnamed protein product [Vitis vinifera] Length = 189 Score = 177 bits (448), Expect(2) = 2e-53 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = -2 Query: 513 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 334 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI Sbjct: 102 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 161 Query: 333 PGVRFKVVKVSGVSLLALFKEKKEKPRS 250 PGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 162 PGVRFKVVKVSGVSLLALFKEKKEKPRS 189 Score = 58.9 bits (141), Expect(2) = 2e-53 Identities = 26/33 (78%), Positives = 29/33 (87%) Frame = -3 Query: 725 LLTFTMGKTRGMGAARKLKTHRRTQRWADKSYK 627 LL+ MGKTRGMGA RKLK+HRR QRWADK+YK Sbjct: 43 LLSVAMGKTRGMGAGRKLKSHRRRQRWADKAYK 75 >sp|Q9M5Z9.1|RS23_EUPES RecName: Full=40S ribosomal protein S23 gi|6716785|gb|AAF26742.1|AF220539_1 40s ribosomal protein S23 [Euphorbia esula] Length = 142 Score = 177 bits (448), Expect(2) = 2e-53 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = -2 Query: 513 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 334 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI Sbjct: 55 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 114 Query: 333 PGVRFKVVKVSGVSLLALFKEKKEKPRS 250 PGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 115 PGVRFKVVKVSGVSLLALFKEKKEKPRS 142 Score = 58.9 bits (141), Expect(2) = 2e-53 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 710 MGKTRGMGAARKLKTHRRTQRWADKSYK 627 MGKT GMGAARKLK+HRRTQRWADKSYK Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYK 28 >gb|ACF06519.1| 40S ribosomal protein S23 [Elaeis guineensis] Length = 142 Score = 177 bits (448), Expect(2) = 2e-53 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = -2 Query: 513 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 334 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI Sbjct: 55 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 114 Query: 333 PGVRFKVVKVSGVSLLALFKEKKEKPRS 250 PGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 115 PGVRFKVVKVSGVSLLALFKEKKEKPRS 142 Score = 58.9 bits (141), Expect(2) = 2e-53 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 710 MGKTRGMGAARKLKTHRRTQRWADKSYK 627 MGKTRGMGAARKLKTHRR QRWADK+YK Sbjct: 1 MGKTRGMGAARKLKTHRRRQRWADKAYK 28 >gb|AFK48775.1| unknown [Lotus japonicus] Length = 142 Score = 177 bits (448), Expect(2) = 3e-53 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = -2 Query: 513 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 334 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI Sbjct: 55 GIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDI 114 Query: 333 PGVRFKVVKVSGVSLLALFKEKKEKPRS 250 PGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 115 PGVRFKVVKVSGVSLLALFKEKKEKPRS 142 Score = 58.5 bits (140), Expect(2) = 3e-53 Identities = 26/28 (92%), Positives = 27/28 (96%) Frame = -3 Query: 710 MGKTRGMGAARKLKTHRRTQRWADKSYK 627 MGKTRGMGAARKLK+HRR QRWADKSYK Sbjct: 1 MGKTRGMGAARKLKSHRRRQRWADKSYK 28