BLASTX nr result

ID: Coptis24_contig00011408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011408
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262...   270   2e-70
emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]   269   5e-70
ref|XP_002521884.1| conserved hypothetical protein [Ricinus comm...   234   1e-59
ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|2...   220   3e-55
ref|XP_003530316.1| PREDICTED: uncharacterized protein LOC100810...   194   2e-47

>ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262842 [Vitis vinifera]
           gi|296081414|emb|CBI16847.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  270 bits (691), Expect = 2e-70
 Identities = 158/259 (61%), Positives = 184/259 (71%), Gaps = 3/259 (1%)
 Frame = +3

Query: 66  MGSCGRNGSVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 245
           MGSCGRNG+VRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI
Sbjct: 1   MGSCGRNGAVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 60

Query: 246 SHVKSHLQMYRSMRSDLIGRQAGLLSTQQSNHSFGYHDGCVDGES-ELGFFHSSKPIKDF 422
           SHVKSHLQMYRSM+SD IGRQ    STQQ   SF  HDGCVD E+ ++GF    K I++ 
Sbjct: 61  SHVKSHLQMYRSMKSD-IGRQ-DRSSTQQRKQSFEDHDGCVDEETGDVGFHPPLKSIEES 118

Query: 423 EPHQPLYSSLPLKRARIETSSSISQNLQCSERICETVSFPYCFDDYLQHNAEKREGIKE- 599
           +  Q +YS L  KRARIET SSIS+NLQCS+RICETV+ PY FDDYL   AEKR GIKE 
Sbjct: 119 D-SQFIYSPLRAKRARIETMSSISENLQCSQRICETVATPYSFDDYL---AEKR-GIKEG 173

Query: 600 -CYRWQTETPNTLFSLPNNSCKLNATCPYTEESAFYKKPMQDEQLFSSGRKNAISTVENG 776
             +RWQT+ P+  F LP++   LN      EES F K    ++Q      K+A++ +   
Sbjct: 174 GGFRWQTQAPSPAFPLPHDLYNLNPFGYAAEESDFLKIAKLEDQ------KHAVAQMNKN 227

Query: 777 DQILSSQSVEHQSDDEEVG 833
           +      +    +D EE G
Sbjct: 228 E-----DNERRPADGEEAG 241


>emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]
          Length = 303

 Score =  269 bits (688), Expect = 5e-70
 Identities = 152/232 (65%), Positives = 174/232 (75%), Gaps = 3/232 (1%)
 Frame = +3

Query: 66  MGSCGRNGSVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 245
           MGSCGRNG+VRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI
Sbjct: 1   MGSCGRNGAVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 60

Query: 246 SHVKSHLQMYRSMRSDLIGRQAGLLSTQQSNHSFGYHDGCVDGES-ELGFFHSSKPIKDF 422
           SHVKSHLQMYRSM+SD IGRQ    STQQ   SF  HDGCVD E+ ++GF    K I++ 
Sbjct: 61  SHVKSHLQMYRSMKSD-IGRQ-DRSSTQQRKQSFEDHDGCVDEETGDVGFHPPLKSIEES 118

Query: 423 EPHQPLYSSLPLKRARIETSSSISQNLQCSERICETVSFPYCFDDYLQHNAEKREGIKE- 599
           +    +YS L  KRARIET SSIS+NLQCS+RICETV+ PY FDDYL   AEKR GIKE 
Sbjct: 119 DSXF-IYSPLRAKRARIETMSSISENLQCSQRICETVATPYSFDDYL---AEKR-GIKEG 173

Query: 600 -CYRWQTETPNTLFSLPNNSCKLNATCPYTEESAFYKKPMQDEQLFSSGRKN 752
             +RWQT+ P+  F LP++   LN      EES F K    ++Q  ++ + N
Sbjct: 174 GGFRWQTQAPSPAFPLPHDLYNLNPFGYAAEESDFLKIAKLEDQKHAAAQMN 225


>ref|XP_002521884.1| conserved hypothetical protein [Ricinus communis]
           gi|223538922|gb|EEF40520.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score =  234 bits (598), Expect = 1e-59
 Identities = 143/268 (53%), Positives = 172/268 (64%), Gaps = 18/268 (6%)
 Frame = +3

Query: 66  MGSCGRNGSVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 245
           MGSCGR+G+VRQY+RSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDV+GLTI
Sbjct: 1   MGSCGRSGTVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTI 60

Query: 246 SHVKSHLQMYRSMRSDLIGRQAGLLSTQQSNHSFGYHDGCVDGESELGFFHSSKPIKDFE 425
           SHVKSHLQMYRSMRSDL G+Q    ST Q    F  HD C+D           +P+ + +
Sbjct: 61  SHVKSHLQMYRSMRSDL-GKQ-DKSSTHQRRQYFDEHDECID---------EVRPLAESD 109

Query: 426 PHQPLYSSLPLKRARIETSSSISQ-NLQCSERICETVSFPYCFDDYLQHNAEKREGIKEC 602
            H  +YS++P KRARIET SSIS  NLQCS+ ICE V+ PY  DDY+      +EG    
Sbjct: 110 SHF-IYSTVPSKRARIETKSSISDTNLQCSQGICEAVTNPYALDDYM----GIKEGNGGG 164

Query: 603 YRWQ---TETPNTLFSLPNNSCKLNATCPYTEESAFYKKP--------------MQDEQL 731
           +RW+   ++   T FSLP++ C LN+     EES F K P               + E+ 
Sbjct: 165 FRWEQTHSKPQFTPFSLPHDLCNLNSFKYAVEESDFLKIPKVKYESCKPAAARMSKLEEA 224

Query: 732 FSSGRKNAISTVENGDQILSSQSVEHQS 815
             SGR  A     NG ++L S S+ H S
Sbjct: 225 TGSGR--AEDEEANGCELLLSLSLPHPS 250


>ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|222864871|gb|EEF02002.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  220 bits (561), Expect = 3e-55
 Identities = 127/223 (56%), Positives = 149/223 (66%), Gaps = 9/223 (4%)
 Frame = +3

Query: 66  MGSCGRNGSVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 245
           MGSCGR+G+VRQY+RSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQ+MDV+GLTI
Sbjct: 1   MGSCGRSGAVRQYVRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQMMDVKGLTI 60

Query: 246 SHVKSHLQMYRSMRSDLIGRQAGLLSTQQSNHSFGYHDGCVDGESELGFFHSSKPIKDFE 425
           SHVKSHLQMYRSMRS  +GR     STQQ   SF  ++ CV+           K I++ +
Sbjct: 61  SHVKSHLQMYRSMRSGDLGR-LDRSSTQQKRQSFAVYNECVE---------EVKAIEESD 110

Query: 426 PHQPLYSSLPLKRARIETSSSISQN-LQCSERICETVSFPYCFDDYLQHNAEKREGIKE- 599
            H  +Y  L  KRARIET SS+S+  LQCS+ ICET+S PY FDDY         GIKE 
Sbjct: 111 SHS-MYRPLSSKRARIETRSSLSEEFLQCSQGICETISNPYSFDDY--------AGIKEE 161

Query: 600 ----CYRWQTETPN---TLFSLPNNSCKLNATCPYTEESAFYK 707
                ++W+    N   T FSLP++    N      EES F K
Sbjct: 162 VNGVGFKWEQTHSNPQCTAFSLPHDLYNFNPLKREVEESDFLK 204


>ref|XP_003530316.1| PREDICTED: uncharacterized protein LOC100810994 [Glycine max]
          Length = 300

 Score =  194 bits (494), Expect = 2e-47
 Identities = 123/221 (55%), Positives = 136/221 (61%), Gaps = 13/221 (5%)
 Frame = +3

Query: 66  MGSCGRNGSVRQYIRSKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTI 245
           MGSCGR G VRQYIRSKVPRLRWTPELH CFV+AIE LGG  KATPKLVLQLMDV+GLTI
Sbjct: 1   MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHYKATPKLVLQLMDVKGLTI 60

Query: 246 SHVKSHLQMYRSMRSDLIGRQAGLLSTQQSNHSFGYHDG-CVDGESELGFFHSSKPIKDF 422
           SHVKSHLQMYRSM+ D   RQ    STQ    SF  HD   VD  S++GF    K IK  
Sbjct: 61  SHVKSHLQMYRSMKGDRSCRQ-DRTSTQHRKQSFQKHDDRFVDEVSDVGFHSCFKSIKKE 119

Query: 423 EPHQPLYSSLPLKRARIETSSSISQNLQCSERICETVSFPY-CFDDYLQHNAEKREGIKE 599
                  ++   KRARIE +S +S  LQCS+RICE V  PY  F DY Q  AE++ GIK+
Sbjct: 120 SDSLSSCTNFSSKRARIEKTSLLSGILQCSQRICEAVPNPYTTFYDYQQSMAEQK-GIKK 178

Query: 600 ---CYRWQTETP--NTLFSLPNNS------CKLNATCPYTE 689
              C  WQ   P   T   LP          KLN   P  E
Sbjct: 179 ICVCSIWQQTQPLSTTFPMLPKQESDFLQVAKLNDKHPLNE 219


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