BLASTX nr result

ID: Coptis24_contig00011404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011404
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28011.3| unnamed protein product [Vitis vinifera]              184   1e-44
ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vi...   184   1e-44
emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera]   184   2e-44
ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|22...   163   3e-38
ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine ...   159   7e-37

>emb|CBI28011.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  184 bits (468), Expect = 1e-44
 Identities = 111/240 (46%), Positives = 153/240 (63%), Gaps = 2/240 (0%)
 Frame = +1

Query: 16  SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 192
           S EN     SN   Q + E   +   D +   I   ++LPN++ + + A   E  PTV D
Sbjct: 95  SFENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 153

Query: 193 LEANSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 369
           +EA + T  GE + +K      +P +      GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 154 VEAIASTSNGELVNDKADANEGQPTSFSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 212

Query: 370 DDEGSELGSVETHVHYHSQAKDADTKEESLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 549
           D EGS+  +V+      +Q+ D++ K E++ + KKQQE K + S +K Q+QLDEAQGLLK
Sbjct: 213 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQQEHKGDASPMKLQDQLDEAQGLLK 272

Query: 550 SAISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERERSNSYGSRVKQLQKDLS 729
           +A+STGQSKEARL RVCAGL +RLQE KSENAQLEELLTAE+E SNSY +R+KQLQ+DLS
Sbjct: 273 TAVSTGQSKEARLTRVCAGLLTRLQECKSENAQLEELLTAEKELSNSYEARIKQLQQDLS 332


>ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vinifera]
          Length = 694

 Score =  184 bits (468), Expect = 1e-44
 Identities = 111/240 (46%), Positives = 153/240 (63%), Gaps = 2/240 (0%)
 Frame = +1

Query: 16  SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 192
           S EN     SN   Q + E   +   D +   I   ++LPN++ + + A   E  PTV D
Sbjct: 77  SFENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 135

Query: 193 LEANSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 369
           +EA + T  GE + +K      +P +      GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 136 VEAIASTSNGELVNDKADANEGQPTSFSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 194

Query: 370 DDEGSELGSVETHVHYHSQAKDADTKEESLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 549
           D EGS+  +V+      +Q+ D++ K E++ + KKQQE K + S +K Q+QLDEAQGLLK
Sbjct: 195 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQQEHKGDASPMKLQDQLDEAQGLLK 254

Query: 550 SAISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERERSNSYGSRVKQLQKDLS 729
           +A+STGQSKEARL RVCAGL +RLQE KSENAQLEELLTAE+E SNSY +R+KQLQ+DLS
Sbjct: 255 TAVSTGQSKEARLTRVCAGLLTRLQECKSENAQLEELLTAEKELSNSYEARIKQLQQDLS 314


>emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera]
          Length = 1793

 Score =  184 bits (466), Expect = 2e-44
 Identities = 111/240 (46%), Positives = 153/240 (63%), Gaps = 2/240 (0%)
 Frame = +1

Query: 16  SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 192
           S EN     SN   Q + E   +   D     I   ++LPN++ + + A   E  PTV D
Sbjct: 86  SFENDETTSSNSTAQANNEQLQNGNKDAFVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 144

Query: 193 LEANSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 369
           +EA + T  GE + +K      +P +L     GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 145 VEAIASTSNGELVNDKADANEGQPTSLSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 203

Query: 370 DDEGSELGSVETHVHYHSQAKDADTKEESLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 549
           D EGS+  +V+      +Q+ D++ K E++ + KKQ+E K + S +K Q+QLDEAQGLLK
Sbjct: 204 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQEEHKGDASPMKLQDQLDEAQGLLK 263

Query: 550 SAISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERERSNSYGSRVKQLQKDLS 729
           +A+STGQSKEARL RVCAGL +RLQE KSENAQLEELLTAE+E SNSY +R+KQLQ+DLS
Sbjct: 264 TAVSTGQSKEARLTRVCAGLLTRLQECKSENAQLEELLTAEKELSNSYEARIKQLQQDLS 323


>ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|223546690|gb|EEF48188.1|
           Golgin-84, putative [Ricinus communis]
          Length = 717

 Score =  163 bits (413), Expect = 3e-38
 Identities = 113/248 (45%), Positives = 146/248 (58%), Gaps = 5/248 (2%)
 Frame = +1

Query: 1   DTEGLSSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESL 177
           D   LS E+     S  I Q   E Q D   D ++  I  P+ L NEV ++D    VE  
Sbjct: 87  DRAALSVEHDTAPTSKSILQVVAEQQQDTDKDASS--IKSPERLANEVVKHD-TDNVEVP 143

Query: 178 PTVNDLEANSPTK-GESITEKTIDEGKE--PFALDLLDTGVDTID-RDLPADAGQDIKTE 345
               D +A + T  GE + EK  D   E  P  L   +  V   D +D P DAG +IK  
Sbjct: 144 VAAADADAKTSTSNGEILNEKAPDGFLEHPPSPLPAKEIEVLNEDHQDHPIDAGVNIKLS 203

Query: 346 NEGTSQKIDDEGSELGSVETHVHYHSQAKDADTKEESLLDSKKQQEFKAETSAVKEQEQL 525
           +     + D E S+  +++T ++     KDAD K   +++ +   + KA+ S  K Q+QL
Sbjct: 204 DAEVPLETDQERSQSANIDTPINDEIVLKDADLKANPVVNQQDHHQQKADNSPKKIQDQL 263

Query: 526 DEAQGLLKSAISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERERSNSYGSRV 705
           +EAQGLLK+AISTGQSKEARLARVCAGLS+RLQEYKSENAQLEELL AERE S S  +R+
Sbjct: 264 EEAQGLLKTAISTGQSKEARLARVCAGLSTRLQEYKSENAQLEELLIAERELSKSLETRI 323

Query: 706 KQLQKDLS 729
           KQLQ+DLS
Sbjct: 324 KQLQQDLS 331


>ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine max]
          Length = 703

 Score =  159 bits (401), Expect = 7e-37
 Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 7/220 (3%)
 Frame = +1

Query: 91  DGTTPEI--SLPDSLPNEVEENDGASKVESLPTVNDLEANSPT---KGESITEKTID--E 249
           D T+P +  SL   L ++V ++D    VE+L  VND +    T    G+++ E   D  E
Sbjct: 112 DATSPLLGSSLSKMLGDDVGKHD-PDDVETL--VNDADIGVATIAANGDTVQESASDVCE 168

Query: 250 GKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKIDDEGSELGSVETHVHYHSQA 429
              P A   ++   D      P   GQ IK+ +   S+ +D E SE  + +T  +  +  
Sbjct: 169 MDPPPAPKEIEGPSDE-----PTSTGQIIKSRDLDASKNVDIEKSESVASDTAPNNDTIL 223

Query: 430 KDADTKEESLLDSKKQQEFKAETSAVKEQEQLDEAQGLLKSAISTGQSKEARLARVCAGL 609
           KD+D K ES++D K Q++ K + S  K Q+QLDEAQGLLK+  STGQSKEARLARVCAGL
Sbjct: 224 KDSDVKLESVVDEKSQEDHKTDISPKKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGL 283

Query: 610 SSRLQEYKSENAQLEELLTAERERSNSYGSRVKQLQKDLS 729
           SSRLQEYKSENAQLEELLT+ERE S SY + +KQLQKDLS
Sbjct: 284 SSRLQEYKSENAQLEELLTSERELSKSYEASIKQLQKDLS 323


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