BLASTX nr result

ID: Coptis24_contig00011395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011395
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326452.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-08
ref|XP_002303352.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_003631446.1| PREDICTED: uncharacterized protein LOC100855...    56   7e-06

>ref|XP_002326452.1| predicted protein [Populus trichocarpa] gi|222833774|gb|EEE72251.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -2

Query: 517 FILKVPFSIRHINRVYTNAFTASRLFLFRLGVIMFGEELEAY---NGQRWERALRLVRER 347
           ++LK+ FS+R + + YT+   +SRLF F+L  I F  +  A    N  R  RALRL+ +R
Sbjct: 32  YVLKLTFSVRLVRQAYTDLLYSSRLFFFQLSQIAFDADQPAALAGNSTRLGRALRLLNQR 91

Query: 346 LINARRSWTTQIHEDSLHAATM 281
           +  ARRS T Q  ED+ HA +M
Sbjct: 92  VTRARRSPTAQDDEDNFHALSM 113


>ref|XP_002303352.1| predicted protein [Populus trichocarpa] gi|222840784|gb|EEE78331.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = -2

Query: 517 FILKVPFSIRHINRVYTNAFTASRLFLFRLGVIMFGEELEAYNGQ---RWERALRLVRER 347
           ++LK+ F++R   R YT    +SRLFLF+L  I F  +  A  G    R  RALRL+ +R
Sbjct: 32  YVLKLTFTVRLFRRAYTGLLHSSRLFLFQLSQIAFDTDQPAPVGNDSTRLRRALRLIYQR 91

Query: 346 LINARRSWTTQIHEDSLHAATM 281
           +   RRS TTQ  ED+ +A +M
Sbjct: 92  VTRTRRSQTTQDDEDNFNALSM 113


>ref|XP_003631446.1| PREDICTED: uncharacterized protein LOC100855263 [Vitis vinifera]
          Length = 111

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -2

Query: 517 FILKVPFSIRHINRVYTNAFTASRLFLFRLGVIMFG-EELEAYNGQRWERALRLVRERLI 341
           F++K+ +S R ++  Y +   ASRLF F+L  I F  ++ +  NG R ERA+RLV  RL 
Sbjct: 31  FLIKLSYSFRFVHGAYADVIHASRLFFFQLRQITFDPQQDDLGNGTRLERAIRLVHRRLT 90

Query: 340 NARRSWTTQIHEDSLHAATMV 278
            + RS      EDSLH  +M+
Sbjct: 91  RSSRSQMDD--EDSLHTLSML 109


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