BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011393
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisu...   370   e-101
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   370   e-101
sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding prote...   370   e-101
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...   370   e-101
gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...   370   e-100

>gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
          Length = 266

 Score =  370 bits (951), Expect = e-101
 Identities = 181/199 (90%), Positives = 185/199 (92%)
 Frame = -3

Query: 599 TMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADPETF 420
           TMR            SP YGPDRVKYLGPFSG SPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 33  TMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF 92

Query: 419 AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 240
           +KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL
Sbjct: 93  SKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 152

Query: 239 VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFSELKV 60
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLADDPEAF+ELKV
Sbjct: 153 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 212

Query: 59  KELKNGRLAMFSMFGFFVQ 3
           KELKNGRLAMFSMFGFFVQ
Sbjct: 213 KELKNGRLAMFSMFGFFVQ 231


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  370 bits (951), Expect = e-101
 Identities = 181/200 (90%), Positives = 186/200 (93%)
 Frame = -3

Query: 602 VTMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADPET 423
           V+MR            SP YGPDRVKYLGPFSG +PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 20  VSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 79

Query: 422 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 243
           FAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS
Sbjct: 80  FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 139

Query: 242 LVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFSELK 63
           LVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLADDPEAF+ELK
Sbjct: 140 LVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 199

Query: 62  VKELKNGRLAMFSMFGFFVQ 3
           VKELKNGRLAMFSMFGFFVQ
Sbjct: 200 VKELKNGRLAMFSMFGFFVQ 219


>sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
           AltName: Full=LHCII type I CAB-8; Flags: Precursor
           gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein
           [Pisum sativum]
          Length = 268

 Score =  370 bits (951), Expect = e-101
 Identities = 181/199 (90%), Positives = 185/199 (92%)
 Frame = -3

Query: 599 TMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADPETF 420
           TMR            SP YGPDRVKYLGPFSG SPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 35  TMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF 94

Query: 419 AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 240
           +KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL
Sbjct: 95  SKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 154

Query: 239 VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFSELKV 60
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLADDPEAF+ELKV
Sbjct: 155 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 214

Query: 59  KELKNGRLAMFSMFGFFVQ 3
           KELKNGRLAMFSMFGFFVQ
Sbjct: 215 KELKNGRLAMFSMFGFFVQ 233


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score =  370 bits (951), Expect = e-101
 Identities = 181/199 (90%), Positives = 185/199 (92%)
 Frame = -3

Query: 599 TMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADPETF 420
           TMR            SP YGPDRVKYLGPFSG SPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 36  TMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETF 95

Query: 419 AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 240
           +KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL
Sbjct: 96  SKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 155

Query: 239 VHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFSELKV 60
           VHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLADDPEAF+ELKV
Sbjct: 156 VHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV 215

Query: 59  KELKNGRLAMFSMFGFFVQ 3
           KELKNGRLAMFSMFGFFVQ
Sbjct: 216 KELKNGRLAMFSMFGFFVQ 234


>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
          Length = 267

 Score =  370 bits (949), Expect = e-100
 Identities = 180/200 (90%), Positives = 185/200 (92%)
 Frame = -3

Query: 602 VTMRXXXXXXXXXXXXSP*YGPDRVKYLGPFSGASPSYLTGEFPGDYGWDTAGLSADPET 423
           +TMR            SP YGPDRVKYLGPFSG +PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 33  ITMRKTASKSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 92

Query: 422 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 243
           FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS
Sbjct: 93  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 152

Query: 242 LVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFSELK 63
           LVHAQSILAIWATQVILMGAVEGYRVAGGPLGE+ DPLYPGGSFDPLGLA+DPEAF+ELK
Sbjct: 153 LVHAQSILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLAEDPEAFAELK 212

Query: 62  VKELKNGRLAMFSMFGFFVQ 3
           VKELKNGRLAMFSMFGFFVQ
Sbjct: 213 VKELKNGRLAMFSMFGFFVQ 232