BLASTX nr result

ID: Coptis24_contig00011389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011389
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23663.3| unnamed protein product [Vitis vinifera]              128   4e-28
emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]   128   4e-28
ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251...   127   9e-28
ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|NP_568624.1| COP1-interacting protein-like protein [Arabidop...   117   1e-24

>emb|CBI23663.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  128 bits (322), Expect = 4e-28
 Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = +3

Query: 87  LRVLETRKVLLQKEQGMAFARAIAAGFDTDSMVHLISFAECFGAPRLMEACVGFMVLWKG 266
           L+VLETRK +LQKEQGMAFARA+AAGFD D M  L+SFAECFGA RLM+AC+ F+ LWK 
Sbjct: 174 LKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSFAECFGASRLMDACLRFLDLWKS 233

Query: 267 KHENDQSLEIIEATEAMSGQSKLSSLNISNTRLNN-TKEYNEFMEARCDSSSK 422
           KHE  Q LE IEA EAMS QS  SS+N S   L+N   +  EF EA  +S S+
Sbjct: 234 KHETGQWLE-IEAAEAMSSQSDFSSMNPSGITLSNMVNKQKEFREAWPESLSE 285


>emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]
          Length = 1351

 Score =  128 bits (322), Expect = 4e-28
 Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = +3

Query: 87  LRVLETRKVLLQKEQGMAFARAIAAGFDTDSMVHLISFAECFGAPRLMEACVGFMVLWKG 266
           L+VLETRK +LQKEQGMAFARA+AAGFD D M  L+SFAECFGA RLM+AC+ F+ LWK 
Sbjct: 181 LKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSFAECFGASRLMDACLRFLDLWKS 240

Query: 267 KHENDQSLEIIEATEAMSGQSKLSSLNISNTRLNN-TKEYNEFMEARCDSSSK 422
           KHE  Q LE IEA EAMS QS  SS+N S   L+N   +  EF EA  +S S+
Sbjct: 241 KHETGQWLE-IEAAEAMSSQSDFSSMNPSGITLSNMVNKQKEFKEAWPESLSE 292


>ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251059 [Vitis vinifera]
          Length = 1292

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = +3

Query: 87  LRVLETRKVLLQKEQGMAFARAIAAGFDTDSMVHLISFAECFGAPRLMEACVGFMVLWKG 266
           L+VLETRK +LQKEQGMAFARA+AAGFD D M  L+SFAECFGA RLM+AC+ F+ LWK 
Sbjct: 174 LKVLETRKTVLQKEQGMAFARAVAAGFDIDHMTPLLSFAECFGASRLMDACLRFLDLWKS 233

Query: 267 KHENDQSLEIIEATEAMSGQSKLSSLNISNTRLNN-TKEYNEFMEA 401
           KHE  Q LE IEA EAMS QS  SS+N S   L+N   +  EF EA
Sbjct: 234 KHETGQWLE-IEAAEAMSSQSDFSSMNPSGITLSNMVNKQKEFREA 278


>ref|XP_002311679.1| predicted protein [Populus trichocarpa] gi|222851499|gb|EEE89046.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  123 bits (309), Expect = 1e-26
 Identities = 68/109 (62%), Positives = 79/109 (72%)
 Frame = +3

Query: 48  NNVKHYKEKVDVYLRVLETRKVLLQKEQGMAFARAIAAGFDTDSMVHLISFAECFGAPRL 227
           + V+    KV + ++ LETRK LLQKEQGMAFARA+AAGFD D M HLISFAE FGA RL
Sbjct: 181 STVQEGNSKVQL-MKALETRKTLLQKEQGMAFARAVAAGFDIDHMAHLISFAESFGALRL 239

Query: 228 MEACVGFMVLWKGKHENDQSLEIIEATEAMSGQSKLSSLNISNTRLNNT 374
           M+ACV FM LWK KHE  Q +E IE  EAMS +S  SS+N S   L+NT
Sbjct: 240 MDACVRFMELWKRKHETGQWVE-IEGAEAMSSRSDFSSMNASGIVLSNT 287


>ref|NP_568624.1| COP1-interacting protein-like protein [Arabidopsis thaliana]
           gi|332007558|gb|AED94941.1| COP1-interacting
           protein-like protein [Arabidopsis thaliana]
          Length = 1237

 Score =  117 bits (293), Expect = 1e-24
 Identities = 64/119 (53%), Positives = 82/119 (68%), Gaps = 3/119 (2%)
 Frame = +3

Query: 87  LRVLETRKVLLQKEQGMAFARAIAAGFDTDSMVHLISFAECFGAPRLMEACVGFMVLWKG 266
           ++VLETRK++LQKEQGMAFARA+AAGF+ D M+ LISFA+ FGA RLM+ACV FM LWK 
Sbjct: 232 MKVLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMDLWKK 291

Query: 267 KHENDQSLEIIEATEAMSGQSKLSSLNISNTRLNNTKEY---NEFMEARCDSSSKFEGN 434
           KHE  Q +E IEATE M+ Q  +S++N S     N        E  +A+  + +K  GN
Sbjct: 292 KHETGQWVE-IEATEVMATQPNISTMNDSGIMFANAANMPGTPENSDAKSPTDNKRNGN 349


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