BLASTX nr result
ID: Coptis24_contig00011386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011386
(764 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL48204.1|AF387174_1 ribosomal protein L2 [Dicentra sp. Qiu ... 191 1e-46
ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoeni... 187 2e-45
gb|AAL48205.1|AF387175_1 ribosomal protein L2 [Platanus occident... 184 1e-44
sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, m... 183 3e-44
ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group... 183 4e-44
>gb|AAL48204.1|AF387174_1 ribosomal protein L2 [Dicentra sp. Qiu 95026]
Length = 186
Score = 191 bits (485), Expect = 1e-46
Identities = 99/177 (55%), Positives = 117/177 (66%), Gaps = 9/177 (5%)
Frame = +1
Query: 67 AHKKWKKIQNASKARAEENSQQLAAYSEDP---------NSQIGNAMPLSEIRIATWVHT 219
AH + A+K R E SQ A++ P NSQIGN +PL++IRI TWVH
Sbjct: 11 AHTYQDLVHTANKGRVEGGSQLAASWPRPPATRYEILDRNSQIGNCIPLADIRIGTWVHD 70
Query: 220 IESVPGQGPKIARSPGAFAKIIKEPGAKKCLLRFPSGVEKLVDSRCRAIIGVGSNPNYRP 399
IE PGQG K+AR+ G FAKI+KEP A +CL+R PSGVEKL+DSRCRA IG+ SNPN+
Sbjct: 71 IECNPGQGAKLARAAGTFAKIMKEP-APQCLVRLPSGVEKLMDSRCRATIGIVSNPNHGA 129
Query: 400 LKLYKAGQNRWLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 570
KL KAGQ+RWLG RP VRGVAMNPVDHPH PWGKPTK G+R+
Sbjct: 130 RKLRKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRA 186
>ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoenix dactylifera]
gi|343478424|gb|AEM43912.1| ribosomal protein L2
(mitochondrion) [Phoenix dactylifera]
Length = 558
Score = 187 bits (476), Expect = 2e-45
Identities = 94/170 (55%), Positives = 116/170 (68%), Gaps = 9/170 (5%)
Frame = +1
Query: 88 IQNASKARAEENSQQLAAYSEDP---------NSQIGNAMPLSEIRIATWVHTIESVPGQ 240
++ A+K R E SQ A++ P NS++GN +PL++IR+ TWVH IE PGQ
Sbjct: 381 VRTANKGRVEGGSQLAASWPRPPAYRYEILDLNSKVGNCIPLADIRMGTWVHDIECHPGQ 440
Query: 241 GPKIARSPGAFAKIIKEPGAKKCLLRFPSGVEKLVDSRCRAIIGVGSNPNYRPLKLYKAG 420
G K+AR+ G +AKIIKEP A +CL+R PSGVEKL+DSRCRA IG+ SNPN+ KL KAG
Sbjct: 441 GAKLARAAGTYAKIIKEP-APQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAG 499
Query: 421 QNRWLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 570
Q+RWLG RP VRGVAMNPVDHPH PWGKPTK G+R+
Sbjct: 500 QSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRA 549
>gb|AAL48205.1|AF387175_1 ribosomal protein L2 [Platanus occidentalis]
Length = 179
Score = 184 bits (468), Expect = 1e-44
Identities = 97/172 (56%), Positives = 112/172 (65%), Gaps = 9/172 (5%)
Frame = +1
Query: 67 AHKKWKKIQNASKARAEENSQQLAAYSEDP---------NSQIGNAMPLSEIRIATWVHT 219
AH + A+K R E SQ A++ P NSQIGN +PL++IRI TWVH
Sbjct: 9 AHTYQDLVHTANKGRVEGGSQLAASWPRPPAYRYDILDLNSQIGNCIPLADIRIGTWVHD 68
Query: 220 IESVPGQGPKIARSPGAFAKIIKEPGAKKCLLRFPSGVEKLVDSRCRAIIGVGSNPNYRP 399
IE PGQG K+AR+ G FAKI+KEP A +CL R PSGVEKL+DSRCRA IG+ SNPN+
Sbjct: 69 IECNPGQGAKLARAAGTFAKIMKEP-APQCLERLPSGVEKLIDSRCRATIGIVSNPNHGA 127
Query: 400 LKLYKAGQNRWLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTK 555
KL KAGQ+RWLG RP VRGVAMNPVDHPH PWGKPTK
Sbjct: 128 RKLRKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTK 179
>sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, mitochondrial
gi|218547415|sp|P0C8K6.1|RM02_ORYSA RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|218551750|sp|Q2F969.2|RM02_ORYSI RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|193240423|dbj|BAA11350.2| ribosomal protein L2 [Oryza
sativa Japonica Group]
Length = 502
Score = 183 bits (465), Expect = 3e-44
Identities = 92/169 (54%), Positives = 114/169 (67%), Gaps = 9/169 (5%)
Frame = +1
Query: 91 QNASKARAEENSQQLAAYSEDP---------NSQIGNAMPLSEIRIATWVHTIESVPGQG 243
+ +K R E SQ A++ P NS++GN++PL++IR+ TWVH IE PGQG
Sbjct: 326 RTVNKGRVEGGSQLAASWPRPPAYRHEILDLNSKVGNSIPLADIRMGTWVHDIECHPGQG 385
Query: 244 PKIARSPGAFAKIIKEPGAKKCLLRFPSGVEKLVDSRCRAIIGVGSNPNYRPLKLYKAGQ 423
K+AR+ G +AKIIKEP A +CL+R PSGVEKL+DSRCRA IG+ SNPN+ KL KAGQ
Sbjct: 386 AKLARAAGTYAKIIKEP-ASQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQ 444
Query: 424 NRWLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 570
+RW G RP VRGVAMNPVDHPH PWGKPTK G+R+
Sbjct: 445 SRWSGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRA 493
>ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group]
gi|194033244|ref|YP_002000581.1| ribosomal protein L2
[Oryza sativa Japonica Group]
gi|23495405|dbj|BAC19886.1| Ribosomal protein L2 [Oryza
sativa Japonica Group] gi|74100083|gb|AAZ99247.1|
ribosomal protein L2 (mitochondrion) [Oryza sativa
Indica Group] gi|74100138|gb|AAZ99301.1| ribosomal
protein L2 (mitochondrion) [Oryza sativa Japonica Group]
gi|74100192|gb|AAZ99354.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Japonica Group]
gi|353685231|gb|AER12994.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|353685298|gb|AER13060.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277621|gb|AEZ03727.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277672|gb|AEZ03777.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
Length = 502
Score = 183 bits (464), Expect = 4e-44
Identities = 92/169 (54%), Positives = 114/169 (67%), Gaps = 9/169 (5%)
Frame = +1
Query: 91 QNASKARAEENSQQLAAYSEDP---------NSQIGNAMPLSEIRIATWVHTIESVPGQG 243
+ +K R E SQ A++ P NS++GN++PL++IR+ TWVH IE PGQG
Sbjct: 326 RTVNKGRVEGGSQLAASWPRPPAYRHEILDLNSKVGNSIPLADIRMGTWVHDIECHPGQG 385
Query: 244 PKIARSPGAFAKIIKEPGAKKCLLRFPSGVEKLVDSRCRAIIGVGSNPNYRPLKLYKAGQ 423
K+AR+ G +AKIIKEP A +CL+R PSGVEKL+DSRCRA IG+ SNPN+ KL KAGQ
Sbjct: 386 AKLARAAGTYAKIIKEP-APQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQ 444
Query: 424 NRWLGIRPHVRGVAMNPVDHPHXXXXXXXXXXXXXXXPWGKPTKCGYRS 570
+RW G RP VRGVAMNPVDHPH PWGKPTK G+R+
Sbjct: 445 SRWSGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRA 493