BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011384
         (1587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...   350   5e-94
ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li...   340   8e-91
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   308   2e-81
emb|CBI23042.3| unnamed protein product [Vitis vinifera]              287   5e-75
ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-69

>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
            gi|222841110|gb|EEE78657.1| f-box family protein [Populus
            trichocarpa]
          Length = 279

 Score =  350 bits (899), Expect = 5e-94
 Identities = 181/285 (63%), Positives = 211/285 (74%), Gaps = 3/285 (1%)
 Frame = -3

Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262
            MDTAQWPQEI +VKP+EE+V+NTC +P +LERKARPQKEQALNCPRCNSTNTKFCYYNNY
Sbjct: 1    MDTAQWPQEI-VVKPIEEIVTNTCPKPPALERKARPQKEQALNCPRCNSTNTKFCYYNNY 59

Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLT 1082
            SLTQPRYFCKTCRRYWTEGGSLRN+PV                            S  L+
Sbjct: 60   SLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSASSSSSSKKLPDLITPTS--LS 117

Query: 1081 QQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS---LS 911
            Q  +QNPKIHEG DLNL FP T+   + SE ++VPSI               ST+   LS
Sbjct: 118  QTSTQNPKIHEGQDLNLAFPSTQSIRSFSELIQVPSINENNNKNPISSSTSASTTTSQLS 177

Query: 910  ALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSLQGV 731
            ALELL TGI+SRGLNSF PMP+QD +T Y+S + + DFKPTLNF +DGLG S YGSLQGV
Sbjct: 178  ALELL-TGISSRGLNSF-PMPVQDPSTLYTSSFPLHDFKPTLNFSLDGLG-SCYGSLQGV 234

Query: 730  QESSGRLLFPFEDLRQVSSTSEFEHNRANGESNGYWSGMLGGGSW 596
            QE++GRLLFPFEDL+QVSST++ EHN+ +G+S GYW+GMLGGGSW
Sbjct: 235  QETNGRLLFPFEDLKQVSSTADIEHNKEHGDSTGYWTGMLGGGSW 279


>ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 288

 Score =  340 bits (871), Expect = 8e-91
 Identities = 177/292 (60%), Positives = 210/292 (71%), Gaps = 10/292 (3%)
 Frame = -3

Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262
            MDTAQWPQEI +VKP+EE+V+NTC +P +LE++ARPQKEQALNCPRCNSTNTKFCYYNNY
Sbjct: 1    MDTAQWPQEI-VVKPLEEIVTNTCPKP-ALEKRARPQKEQALNCPRCNSTNTKFCYYNNY 58

Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DH 1088
            SL+QPRYFCK CRRYWTEGGSLRN+PV                                 
Sbjct: 59   SLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSSSSASSKKLPDLVPPG 118

Query: 1087 LTQQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS--- 917
             +Q  +QNPKIHEG DLNL FP  + + ++SEF+++PSIE              +++   
Sbjct: 119  CSQSSAQNPKIHEGQDLNLSFPAAQDFRSVSEFMQMPSIENSNNNTNNSSKSHITSTSST 178

Query: 916  ---LSALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYG 746
               LSALELL TGITSRGLNSFMPMPI D NT Y++G+ MQ+FKPTLNF +DGLG SGYG
Sbjct: 179  SSHLSALELL-TGITSRGLNSFMPMPIPDPNTVYTTGFPMQEFKPTLNFSLDGLG-SGYG 236

Query: 745  SLQGVQ-ESSGRLLFPFEDLRQVSSTSE-FEHNRANGESNGYWSGMLGGGSW 596
            S+QGVQ  SSGRLLFPFEDL+QVSST++  E  R  G+S GYW+GMLGGGSW
Sbjct: 237  SIQGVQGSSSGRLLFPFEDLKQVSSTADHIEQTREQGDSTGYWTGMLGGGSW 288


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
            gi|222846699|gb|EEE84246.1| f-box family protein [Populus
            trichocarpa]
          Length = 247

 Score =  308 bits (790), Expect = 2e-81
 Identities = 165/284 (58%), Positives = 194/284 (68%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262
            MDTAQWPQEI +VKP+EE+V NTCS+P +LERK RPQKEQALNCPRCNSTNTKFCYYNNY
Sbjct: 1    MDTAQWPQEI-VVKPIEEIVVNTCSKPPALERKVRPQKEQALNCPRCNSTNTKFCYYNNY 59

Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLT 1082
            SLTQPRYFCKTCRRYWTEGGSLR++PV                            +  L+
Sbjct: 60   SLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSASSSSSSKKLPDLISPPT--LS 117

Query: 1081 QQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTSLSALE 902
            Q  ++N KIHEG DLNL FP T+                                +  LE
Sbjct: 118  QTSTENHKIHEGQDLNLAFPSTQ-------------------------------GIRTLE 146

Query: 901  LLRTGITSRGLNSFMPMPI-QDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSLQGVQE 725
            LL TGI+SRGLNSF PMP+ QD +T Y SG+ +QDFKPTL+F +DGLG SGYG LQGV E
Sbjct: 147  LL-TGISSRGLNSF-PMPVHQDPSTLYPSGFPLQDFKPTLSFSLDGLG-SGYGDLQGVHE 203

Query: 724  SSGRLLFPFEDLR-QVSSTSEFEHNRANGESNGYWSGMLGGGSW 596
            ++GRLLFPFEDL+ QVSST++ E N+ +G+S GYW+GMLGGGSW
Sbjct: 204  TNGRLLFPFEDLKQQVSSTADIEQNKEHGDSTGYWTGMLGGGSW 247


>emb|CBI23042.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  287 bits (735), Expect = 5e-75
 Identities = 161/289 (55%), Positives = 182/289 (62%), Gaps = 7/289 (2%)
 Frame = -3

Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262
            MDTAQWPQ IG+VKPME       S P++ ER+ARPQK+QALNCPRCNSTNTKFCYYNNY
Sbjct: 1    MDTAQWPQGIGVVKPMES------SGPVA-ERRARPQKDQALNCPRCNSTNTKFCYYNNY 53

Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHL- 1085
            SL+QPRYFCKTCRRYWTEGGSLRNVPV                             DHL 
Sbjct: 54   SLSQPRYFCKTCRRYWTEGGSLRNVPV-GGGSRKNKRSTSSSSSSSSPASSKKLLPDHLI 112

Query: 1084 ---TQQQSQNPKIHEGHDLNLGF-PITEPYHN-ISEFVEVPSIEXXXXXXXXXXXXXXST 920
                   SQNPKIHEG DLNL F P  E Y+N ISEF ++                    
Sbjct: 113  TRFPSSASQNPKIHEGQDLNLAFPPPPEDYNNSISEFADL-------------------- 152

Query: 919  SLSALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSL 740
                           GL SFMPM + DSN+ YSSG+ +Q+FKPTLNF +DG   SGYGSL
Sbjct: 153  ---------------GLGSFMPMSVSDSNSIYSSGFPLQEFKPTLNFSLDGF-QSGYGSL 196

Query: 739  QGVQESSGRLLFPFEDLRQVSSTSEFEHNR-ANGESNGYWSGMLGGGSW 596
            QGVQES  RLLFP EDL+QVS+T+EFE +R   G+S GYW+GMLGGGSW
Sbjct: 197  QGVQESGARLLFPLEDLKQVSNTTEFEQSRGVQGDSAGYWNGMLGGGSW 245


>ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|222860981|gb|EEE98523.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  270 bits (689), Expect = 1e-69
 Identities = 147/271 (54%), Positives = 177/271 (65%), Gaps = 4/271 (1%)
 Frame = -3

Query: 1396 MEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY 1217
            M+EM SN+C RP  +ERK RPQ++  LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY
Sbjct: 1    MDEMASNSCGRP-GVERKPRPQEQ--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY 57

Query: 1216 WTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLTQQQSQNPK-IHEGHD 1040
            WTEGGSLRNVPV                            S  L+   SQNPK  HEG D
Sbjct: 58   WTEGGSLRNVPVGGGSRKNKRSTSSSVATSSSKLPDLNPPS--LSHFSSQNPKSTHEGQD 115

Query: 1039 LNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS-LSALELLRTGITSRGLNS 863
            LNL FP  +    IS + EVP  E              ++S +SA+ELLR+G  SRGLN+
Sbjct: 116  LNLAFPAMQDSQGISHYTEVPKTENRNNNQHNSSSSPYTSSPISAMELLRSGFASRGLNT 175

Query: 862  FMPMPIQDSNTTYSS-GYAMQDFKPTLNFGVDGLGVSGYGSLQGVQESSGRLLFPFEDLR 686
            F+P P+ DSNT YSS G+ +Q+ +PTL+F  DGL     GS  G+QE+SGRLLFPF +L+
Sbjct: 176  FIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGL-----GSRYGIQENSGRLLFPFGELK 230

Query: 685  QVSS-TSEFEHNRANGESNGYWSGMLGGGSW 596
            Q+SS TSE + N+  G S+GYW+GM GGGSW
Sbjct: 231  QLSSTTSEVDQNKGQGGSSGYWNGMFGGGSW 261