BLASTX nr result
ID: Coptis24_contig00011384
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011384 (1587 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g... 350 5e-94 ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li... 340 8e-91 ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g... 308 2e-81 emb|CBI23042.3| unnamed protein product [Vitis vinifera] 287 5e-75 ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|2... 270 1e-69 >ref|XP_002303678.1| f-box family protein [Populus trichocarpa] gi|222841110|gb|EEE78657.1| f-box family protein [Populus trichocarpa] Length = 279 Score = 350 bits (899), Expect = 5e-94 Identities = 181/285 (63%), Positives = 211/285 (74%), Gaps = 3/285 (1%) Frame = -3 Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262 MDTAQWPQEI +VKP+EE+V+NTC +P +LERKARPQKEQALNCPRCNSTNTKFCYYNNY Sbjct: 1 MDTAQWPQEI-VVKPIEEIVTNTCPKPPALERKARPQKEQALNCPRCNSTNTKFCYYNNY 59 Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLT 1082 SLTQPRYFCKTCRRYWTEGGSLRN+PV S L+ Sbjct: 60 SLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSASSSSSSKKLPDLITPTS--LS 117 Query: 1081 QQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS---LS 911 Q +QNPKIHEG DLNL FP T+ + SE ++VPSI ST+ LS Sbjct: 118 QTSTQNPKIHEGQDLNLAFPSTQSIRSFSELIQVPSINENNNKNPISSSTSASTTTSQLS 177 Query: 910 ALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSLQGV 731 ALELL TGI+SRGLNSF PMP+QD +T Y+S + + DFKPTLNF +DGLG S YGSLQGV Sbjct: 178 ALELL-TGISSRGLNSF-PMPVQDPSTLYTSSFPLHDFKPTLNFSLDGLG-SCYGSLQGV 234 Query: 730 QESSGRLLFPFEDLRQVSSTSEFEHNRANGESNGYWSGMLGGGSW 596 QE++GRLLFPFEDL+QVSST++ EHN+ +G+S GYW+GMLGGGSW Sbjct: 235 QETNGRLLFPFEDLKQVSSTADIEHNKEHGDSTGYWTGMLGGGSW 279 >ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera] Length = 288 Score = 340 bits (871), Expect = 8e-91 Identities = 177/292 (60%), Positives = 210/292 (71%), Gaps = 10/292 (3%) Frame = -3 Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262 MDTAQWPQEI +VKP+EE+V+NTC +P +LE++ARPQKEQALNCPRCNSTNTKFCYYNNY Sbjct: 1 MDTAQWPQEI-VVKPLEEIVTNTCPKP-ALEKRARPQKEQALNCPRCNSTNTKFCYYNNY 58 Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DH 1088 SL+QPRYFCK CRRYWTEGGSLRN+PV Sbjct: 59 SLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSSSSASSKKLPDLVPPG 118 Query: 1087 LTQQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS--- 917 +Q +QNPKIHEG DLNL FP + + ++SEF+++PSIE +++ Sbjct: 119 CSQSSAQNPKIHEGQDLNLSFPAAQDFRSVSEFMQMPSIENSNNNTNNSSKSHITSTSST 178 Query: 916 ---LSALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYG 746 LSALELL TGITSRGLNSFMPMPI D NT Y++G+ MQ+FKPTLNF +DGLG SGYG Sbjct: 179 SSHLSALELL-TGITSRGLNSFMPMPIPDPNTVYTTGFPMQEFKPTLNFSLDGLG-SGYG 236 Query: 745 SLQGVQ-ESSGRLLFPFEDLRQVSSTSE-FEHNRANGESNGYWSGMLGGGSW 596 S+QGVQ SSGRLLFPFEDL+QVSST++ E R G+S GYW+GMLGGGSW Sbjct: 237 SIQGVQGSSSGRLLFPFEDLKQVSSTADHIEQTREQGDSTGYWTGMLGGGSW 288 >ref|XP_002299441.1| f-box family protein [Populus trichocarpa] gi|222846699|gb|EEE84246.1| f-box family protein [Populus trichocarpa] Length = 247 Score = 308 bits (790), Expect = 2e-81 Identities = 165/284 (58%), Positives = 194/284 (68%), Gaps = 2/284 (0%) Frame = -3 Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262 MDTAQWPQEI +VKP+EE+V NTCS+P +LERK RPQKEQALNCPRCNSTNTKFCYYNNY Sbjct: 1 MDTAQWPQEI-VVKPIEEIVVNTCSKPPALERKVRPQKEQALNCPRCNSTNTKFCYYNNY 59 Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLT 1082 SLTQPRYFCKTCRRYWTEGGSLR++PV + L+ Sbjct: 60 SLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSASSSSSSKKLPDLISPPT--LS 117 Query: 1081 QQQSQNPKIHEGHDLNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTSLSALE 902 Q ++N KIHEG DLNL FP T+ + LE Sbjct: 118 QTSTENHKIHEGQDLNLAFPSTQ-------------------------------GIRTLE 146 Query: 901 LLRTGITSRGLNSFMPMPI-QDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSLQGVQE 725 LL TGI+SRGLNSF PMP+ QD +T Y SG+ +QDFKPTL+F +DGLG SGYG LQGV E Sbjct: 147 LL-TGISSRGLNSF-PMPVHQDPSTLYPSGFPLQDFKPTLSFSLDGLG-SGYGDLQGVHE 203 Query: 724 SSGRLLFPFEDLR-QVSSTSEFEHNRANGESNGYWSGMLGGGSW 596 ++GRLLFPFEDL+ QVSST++ E N+ +G+S GYW+GMLGGGSW Sbjct: 204 TNGRLLFPFEDLKQQVSSTADIEQNKEHGDSTGYWTGMLGGGSW 247 >emb|CBI23042.3| unnamed protein product [Vitis vinifera] Length = 245 Score = 287 bits (735), Expect = 5e-75 Identities = 161/289 (55%), Positives = 182/289 (62%), Gaps = 7/289 (2%) Frame = -3 Query: 1441 MDTAQWPQEIGLVKPMEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNY 1262 MDTAQWPQ IG+VKPME S P++ ER+ARPQK+QALNCPRCNSTNTKFCYYNNY Sbjct: 1 MDTAQWPQGIGVVKPMES------SGPVA-ERRARPQKDQALNCPRCNSTNTKFCYYNNY 53 Query: 1261 SLTQPRYFCKTCRRYWTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHL- 1085 SL+QPRYFCKTCRRYWTEGGSLRNVPV DHL Sbjct: 54 SLSQPRYFCKTCRRYWTEGGSLRNVPV-GGGSRKNKRSTSSSSSSSSPASSKKLLPDHLI 112 Query: 1084 ---TQQQSQNPKIHEGHDLNLGF-PITEPYHN-ISEFVEVPSIEXXXXXXXXXXXXXXST 920 SQNPKIHEG DLNL F P E Y+N ISEF ++ Sbjct: 113 TRFPSSASQNPKIHEGQDLNLAFPPPPEDYNNSISEFADL-------------------- 152 Query: 919 SLSALELLRTGITSRGLNSFMPMPIQDSNTTYSSGYAMQDFKPTLNFGVDGLGVSGYGSL 740 GL SFMPM + DSN+ YSSG+ +Q+FKPTLNF +DG SGYGSL Sbjct: 153 ---------------GLGSFMPMSVSDSNSIYSSGFPLQEFKPTLNFSLDGF-QSGYGSL 196 Query: 739 QGVQESSGRLLFPFEDLRQVSSTSEFEHNR-ANGESNGYWSGMLGGGSW 596 QGVQES RLLFP EDL+QVS+T+EFE +R G+S GYW+GMLGGGSW Sbjct: 197 QGVQESGARLLFPLEDLKQVSNTTEFEQSRGVQGDSAGYWNGMLGGGSW 245 >ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|222860981|gb|EEE98523.1| predicted protein [Populus trichocarpa] Length = 261 Score = 270 bits (689), Expect = 1e-69 Identities = 147/271 (54%), Positives = 177/271 (65%), Gaps = 4/271 (1%) Frame = -3 Query: 1396 MEEMVSNTCSRPMSLERKARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY 1217 M+EM SN+C RP +ERK RPQ++ LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY Sbjct: 1 MDEMASNSCGRP-GVERKPRPQEQ--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY 57 Query: 1216 WTEGGSLRNVPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHLTQQQSQNPK-IHEGHD 1040 WTEGGSLRNVPV S L+ SQNPK HEG D Sbjct: 58 WTEGGSLRNVPVGGGSRKNKRSTSSSVATSSSKLPDLNPPS--LSHFSSQNPKSTHEGQD 115 Query: 1039 LNLGFPITEPYHNISEFVEVPSIEXXXXXXXXXXXXXXSTS-LSALELLRTGITSRGLNS 863 LNL FP + IS + EVP E ++S +SA+ELLR+G SRGLN+ Sbjct: 116 LNLAFPAMQDSQGISHYTEVPKTENRNNNQHNSSSSPYTSSPISAMELLRSGFASRGLNT 175 Query: 862 FMPMPIQDSNTTYSS-GYAMQDFKPTLNFGVDGLGVSGYGSLQGVQESSGRLLFPFEDLR 686 F+P P+ DSNT YSS G+ +Q+ +PTL+F DGL GS G+QE+SGRLLFPF +L+ Sbjct: 176 FIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGL-----GSRYGIQENSGRLLFPFGELK 230 Query: 685 QVSS-TSEFEHNRANGESNGYWSGMLGGGSW 596 Q+SS TSE + N+ G S+GYW+GM GGGSW Sbjct: 231 QLSSTTSEVDQNKGQGGSSGYWNGMFGGGSW 261