BLASTX nr result

ID: Coptis24_contig00011376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011376
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258...   174   1e-41
ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245...   168   7e-40
emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]   168   7e-40
dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]           165   6e-39
ref|XP_003551101.1| PREDICTED: uncharacterized protein LOC100817...   164   1e-38

>ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258569 [Vitis vinifera]
          Length = 783

 Score =  174 bits (440), Expect = 1e-41
 Identities = 94/199 (47%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
 Frame = +1

Query: 4   LLSLLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEADLTVCPQCE 183
           LL LLK   P+G TLPS Y   K +L+DLG+    IDAC ++CMLY K  A+   C  C 
Sbjct: 178 LLELLKDAFPEGETLPSNYYEAKKILRDLGLHYIKIDACPSDCMLYSKEYANANECVVCG 237

Query: 184 TPRYXXXXXXXXXXXXXXXXX------VLRHFPLIPRLKRLYTISWMAREMTWHSRATPS 345
             R+                       VLR+FPL PRL+RLY  S  A  M WH      
Sbjct: 238 VSRWKSSDEHSTDEFTNSAKKKKIPAKVLRYFPLKPRLQRLYMSSKTASHMKWHVDGRME 297

Query: 346 WNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVPYN 525
              MRHP+DSL WK   +  P FA E RNV LG+A+DGFNP G  S  YS WPV ++PYN
Sbjct: 298 GEMMRHPVDSLAWKNFDNVHPSFALEPRNVRLGLASDGFNPFGNMSISYSMWPVVLIPYN 357

Query: 526 LPPSLCMKSEFHMMSLLIP 582
           LPP +CMK  F M+SLLIP
Sbjct: 358 LPPWMCMKQTFFMLSLLIP 376


>ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245099 [Vitis vinifera]
          Length = 1264

 Score =  168 bits (425), Expect = 7e-40
 Identities = 93/200 (46%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
 Frame = +1

Query: 4   LLSLLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEADLTVCPQCE 183
           LL LLK   P+G TLPS Y   K +L+DLG+    IDAC ++CMLY K  A+   C  C 
Sbjct: 86  LLELLKEAFPEGETLPSNYYEAKKILRDLGLHYIKIDACPSDCMLYSKKHANANECVVCG 145

Query: 184 TPRYXXXXXXXXXXXXXXXXX------VLRHFPLIPRLKRLYTISWMAREMTWHSRATPS 345
             R+                       VLR FPL PRL+RLY  +  A  M WH      
Sbjct: 146 VSRWKSSDDHSTDEFTNSAKKKKIPAKVLRFFPLKPRLQRLYMSAKTASHMKWHVDGRME 205

Query: 346 WNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVPYN 525
              MRHP DSL WK   +  P FA E RNV LG+A+DGFNP G  S  YS WPV ++PYN
Sbjct: 206 DEMMRHPADSLAWKNFDNVHPSFALEPRNVRLGLASDGFNPFGNMSISYSMWPVVLIPYN 265

Query: 526 LPPSLCMKSEFHMMSLLIPG 585
           LPP + MK  F M+SLLIPG
Sbjct: 266 LPPWMYMKQTFFMLSLLIPG 285


>emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]
          Length = 1295

 Score =  168 bits (425), Expect = 7e-40
 Identities = 87/195 (44%), Positives = 110/195 (56%), Gaps = 1/195 (0%)
 Frame = +1

Query: 4   LLSLLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEADLTVCPQCE 183
           LL LL    PDG  +P  +   K ML+D G+  + I AC+ +C L++K       CP C 
Sbjct: 182 LLELLLDAFPDGANIPKSHYDAKKMLRDFGLGYDSIHACKYDCALFWKENETFHNCPVCN 241

Query: 184 TPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHS-RATPSWNYMR 360
            PRY                 VLRHFPL PRL+RL+   + + +M WH  +       +R
Sbjct: 242 EPRYKNGKIPQK---------VLRHFPLKPRLQRLFMSRYTSADMRWHKEKRFHEDGVLR 292

Query: 361 HPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVPYNLPPSL 540
           HP DS  WK   + +P FA++ RNV LG+ATDGFNP G  S  YS WPV +VPYN+PP  
Sbjct: 293 HPADSEVWKDFDNQYPWFAQDARNVRLGLATDGFNPFGTMSNNYSMWPVVLVPYNMPPWK 352

Query: 541 CMKSEFHMMSLLIPG 585
           CMK  F MMSLLIPG
Sbjct: 353 CMKESFFMMSLLIPG 367


>dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]
          Length = 606

 Score =  165 bits (417), Expect = 6e-39
 Identities = 84/194 (43%), Positives = 110/194 (56%)
 Frame = +1

Query: 4   LLSLLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEADLTVCPQCE 183
           LL LL++  P+GN +P  +   K  LK +G+  E I  C+N+C L++K    L  CP C 
Sbjct: 201 LLELLQSSHPEGNKIPPSHYVAKKTLKKIGLGYESIHVCKNDCALFWKEHHSLHNCPVCN 260

Query: 184 TPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHSRATPSWNYMRH 363
             R+                 VLR+FPL PRL+RLY     A++M WHS        MRH
Sbjct: 261 ESRWVDTNTKGKKVPHK----VLRYFPLTPRLRRLYCSRHTAKDMIWHSTGRSEEGTMRH 316

Query: 364 PIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVPYNLPPSLC 543
           P+D   WK     +P+F++E RNV LG+A DGFNP G  S+ +S WPV +  YNLPP LC
Sbjct: 317 PVDGSSWKEFDIRYPNFSREPRNVRLGLAADGFNPFGNMSSAHSTWPVVLTTYNLPPWLC 376

Query: 544 MKSEFHMMSLLIPG 585
           MK    M+SLLIPG
Sbjct: 377 MKESSFMLSLLIPG 390


>ref|XP_003551101.1| PREDICTED: uncharacterized protein LOC100817991 [Glycine max]
          Length = 1027

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/194 (43%), Positives = 107/194 (55%)
 Frame = +1

Query: 4   LLSLLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEADLTVCPQCE 183
           LL LL   LP+ NTLP  +   K ++  LG+  E I  C N C+LY K  AD  +CP+C 
Sbjct: 219 LLELLSDALPEENTLPKSFYDTKKIISGLGLSYEKIHVCPNECILYRKDLADAEICPKCN 278

Query: 184 TPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHSRATPSWNYMRH 363
             R+                 +LR FPLIPRL+RL+     A  M WH         +RH
Sbjct: 279 LSRWKYNSDDVECRKKIPAK-ILRWFPLIPRLQRLFVSPKTACSMIWHEVGRTKDGLLRH 337

Query: 364 PIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVPYNLPPSLC 543
           P DS  WK     +PDFA + RNV LG+ATDGFNP    +  +S WPV ++PYNLPP +C
Sbjct: 338 PADSFAWKNFDCQYPDFACDARNVRLGLATDGFNPFKTMAISHSTWPVILIPYNLPPWMC 397

Query: 544 MKSEFHMMSLLIPG 585
           MK    ++SLLIPG
Sbjct: 398 MKQPNFILSLLIPG 411


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