BLASTX nr result

ID: Coptis24_contig00011374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011374
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32857.3| unnamed protein product [Vitis vinifera]               82   2e-13
ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit ...    82   2e-13
ref|XP_003624794.1| COP9 signalosome complex subunit [Medicago t...    82   2e-13
gb|AFK45053.1| unknown [Medicago truncatula]                           81   3e-13
gb|AFK46802.1| unknown [Lotus japonicus]                               80   6e-13

>emb|CBI32857.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 48/88 (54%), Positives = 51/88 (57%)
 Frame = -1

Query: 749 KELNVPENDVEQLLVSLILDNRIHGHIDQVNRLLERGDRSKXXXXXXXXXXXXXXXXXXX 570
           KELNVPE DVEQLLVSLILDNRI GHIDQVNRLLERGDRSK                   
Sbjct: 373 KELNVPEEDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSK------------------- 413

Query: 569 XXXXXXXXXXXXXXQLKSLYQIVNTRIG 486
                         QLKSLYQ ++ R+G
Sbjct: 414 -GMKKYAAVEKWNTQLKSLYQTISNRVG 440


>ref|XP_002283810.1| PREDICTED: COP9 signalosome complex subunit 2-like [Vitis vinifera]
          Length = 439

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 48/88 (54%), Positives = 51/88 (57%)
 Frame = -1

Query: 749 KELNVPENDVEQLLVSLILDNRIHGHIDQVNRLLERGDRSKXXXXXXXXXXXXXXXXXXX 570
           KELNVPE DVEQLLVSLILDNRI GHIDQVNRLLERGDRSK                   
Sbjct: 372 KELNVPEEDVEQLLVSLILDNRIQGHIDQVNRLLERGDRSK------------------- 412

Query: 569 XXXXXXXXXXXXXXQLKSLYQIVNTRIG 486
                         QLKSLYQ ++ R+G
Sbjct: 413 -GMKKYAAVEKWNTQLKSLYQTISNRVG 439


>ref|XP_003624794.1| COP9 signalosome complex subunit [Medicago truncatula]
           gi|355499809|gb|AES81012.1| COP9 signalosome complex
           subunit [Medicago truncatula]
          Length = 439

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 48/88 (54%), Positives = 51/88 (57%)
 Frame = -1

Query: 749 KELNVPENDVEQLLVSLILDNRIHGHIDQVNRLLERGDRSKXXXXXXXXXXXXXXXXXXX 570
           KELNVPE+DVEQLLVSLILDNRI GHIDQVNRLLER DRSK                   
Sbjct: 372 KELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSK------------------- 412

Query: 569 XXXXXXXXXXXXXXQLKSLYQIVNTRIG 486
                         QLKSLYQ +N R+G
Sbjct: 413 -GMKKYTAVDKWNTQLKSLYQTINNRVG 439


>gb|AFK45053.1| unknown [Medicago truncatula]
          Length = 439

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 49/88 (55%), Positives = 51/88 (57%)
 Frame = -1

Query: 749 KELNVPENDVEQLLVSLILDNRIHGHIDQVNRLLERGDRSKXXXXXXXXXXXXXXXXXXX 570
           KELNVPE+DVEQLLVSLILDNRI GHIDQVNRLLER DRSK                   
Sbjct: 372 KELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERFDRSK------------------- 412

Query: 569 XXXXXXXXXXXXXXQLKSLYQIVNTRIG 486
                         QLKSLYQ +N RIG
Sbjct: 413 -GMKKYTAVDKWNTQLKSLYQTINNRIG 439


>gb|AFK46802.1| unknown [Lotus japonicus]
          Length = 240

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 47/88 (53%), Positives = 51/88 (57%)
 Frame = -1

Query: 749 KELNVPENDVEQLLVSLILDNRIHGHIDQVNRLLERGDRSKXXXXXXXXXXXXXXXXXXX 570
           KELNVPE+DVEQLLVSLILDNRI GHIDQVNRLLER DRSK                   
Sbjct: 173 KELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSK------------------- 213

Query: 569 XXXXXXXXXXXXXXQLKSLYQIVNTRIG 486
                         QLKSLYQ ++ R+G
Sbjct: 214 -GMKKYTAVDKWNTQLKSLYQTISNRVG 240


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