BLASTX nr result

ID: Coptis24_contig00011370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011370
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-38
gb|ABK92443.1| unknown [Populus trichocarpa]                           97   3e-38
ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775...    86   9e-33
dbj|BAC15474.1| unknown protein [Oryza sativa Japonica Group] gi...    79   3e-24
gb|EEE67740.1| hypothetical protein OsJ_25431 [Oryza sativa Japo...    79   3e-24

>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 96.7 bits (239), Expect(2) = 2e-38
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +3

Query: 36  QGLEYWLRWQVPVCALIFLLPTVGAFFVIFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRA 215
           +GL YWLRWQVPVCAL  + P++ +F++I K K   L   DLW P WR L+P++LL YR 
Sbjct: 6   EGLGYWLRWQVPVCALAIICPSLLSFYIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRF 65

Query: 216 LVFSFMSWLLYRVAVSDRVFAFFFYT 293
             F  +S +LYR+   D  FAF+FYT
Sbjct: 66  FAFLCLSPMLYRIVYLDGAFAFYFYT 91



 Score = 88.6 bits (218), Expect(2) = 2e-38
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +2

Query: 413 TIISAHGCWEYLKTPVVGNQ-ERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRHHEEE 589
           T+ISA+GCW  LK P V    E   FLK+  E+    T++T K  + G T+ L+ H  EE
Sbjct: 106 TVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDATATSITYKEKKSGGTIKLRSHCAEE 165

Query: 590 EVKQQAGFWGYLMLILYQTCAGA 658
            ++++AGFWGYLM I+YQTCAGA
Sbjct: 166 AIRERAGFWGYLMQIIYQTCAGA 188


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score = 96.7 bits (239), Expect(2) = 3e-38
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +3

Query: 36  QGLEYWLRWQVPVCALIFLLPTVGAFFVIFKVKKPHLNSTDLWIPCWRGLHPIYLLIYRA 215
           +GL YWLRWQVPVCAL  + P++ +F++I K K   L   DLW P WR L+P++LL YR 
Sbjct: 6   EGLGYWLRWQVPVCALAIICPSLLSFYIIKKAKTQPLYIHDLWKPRWRCLNPLWLLCYRF 65

Query: 216 LVFSFMSWLLYRVAVSDRVFAFFFYT 293
             F  +S +LYR+   D  FAF+FYT
Sbjct: 66  FAFLCLSPMLYRIVYLDGAFAFYFYT 91



 Score = 88.2 bits (217), Expect(2) = 3e-38
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +2

Query: 413 TIISAHGCWEYLKTPVVGNQ-ERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRHHEEE 589
           T+ISA+GCW  LK P V    E   FLK+  E+    T++T K  + G T+ L+ H  EE
Sbjct: 106 TVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDGTATSITYKEKKSGGTIKLRSHCAEE 165

Query: 590 EVKQQAGFWGYLMLILYQTCAGA 658
            ++++AGFWGYLM I+YQTCAGA
Sbjct: 166 AIRERAGFWGYLMQIIYQTCAGA 188


>ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775788 [Glycine max]
          Length = 407

 Score = 85.5 bits (210), Expect(2) = 9e-33
 Identities = 37/93 (39%), Positives = 53/93 (56%)
 Frame = +3

Query: 15  VHSHDQQQGLEYWLRWQVPVCALIFLLPTVGAFFVIFKVKKPHLNSTDLWIPCWRGLHPI 194
           + S +  +G +YW RWQVPVCALI ++  + A   I K K        LW+PCWR L P+
Sbjct: 89  LQSGEDTEGYKYWFRWQVPVCALILIVSIITASMQIVKAKAQPFYHNHLWLPCWRKLSPV 148

Query: 195 YLLIYRALVFSFMSWLLYRVAVSDRVFAFFFYT 293
           +L   RA  F  ++ L + +   D  F+F+FYT
Sbjct: 149 WLFFSRAFAFLCLAHLHFDIIALDGAFSFYFYT 181



 Score = 80.9 bits (198), Expect(2) = 9e-33
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +2

Query: 413 TIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRHHEEEE 592
           TIISAHGCW+Y+  P + N E  EFL++  E+S    ++  +  E  +++ LQ  + +EE
Sbjct: 196 TIISAHGCWQYINKPPLQNGEMAEFLRRDLEEST--NSIAYREKETKSSIRLQSQYIQEE 253

Query: 593 VKQQAGFWGYLMLILYQTCAGA 658
             Q+ GFWGYLM I YQT AGA
Sbjct: 254 FNQRVGFWGYLMQITYQTSAGA 275


>dbj|BAC15474.1| unknown protein [Oryza sativa Japonica Group]
           gi|50510136|dbj|BAD31101.1| unknown protein [Oryza
           sativa Japonica Group]
          Length = 390

 Score = 79.3 bits (194), Expect(2) = 3e-24
 Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 48  YWLRWQVPVCALIFLLPTVGAFFVIFKVKKPH--LNSTDLWIPCWRGLHPIYLLIYRALV 221
           YWLRWQV VC  + +LPT  A  ++ ++++    L  TDLW+PCW  LHP +LL YRA  
Sbjct: 85  YWLRWQVFVCGALIVLPTAAAAALLPRLRRAAAPLRGTDLWVPCWARLHPGWLLGYRAFA 144

Query: 222 FSFMSWLLYRVAVSDRVFAFFFYT 293
            +    LL R+ V   +  FFFYT
Sbjct: 145 LAAAVALLVRLLVGHGIDVFFFYT 168



 Score = 58.5 bits (140), Expect(2) = 3e-24
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +2

Query: 413 TIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRHHEEEE 592
           T ISAHGCW Y K  +    E  EFL   S+D + R   TS      +   +  +HE+  
Sbjct: 182 TAISAHGCWVYSKKNLKKADESHEFL---SDDVENREFSTSSGEMKRDEEKITNYHEQIA 238

Query: 593 VKQQAGFWGYLMLILYQTCAGAS 661
            +++AG WG  M I+YQT AGA+
Sbjct: 239 NEKRAGLWGRCMQIIYQTSAGAT 261


>gb|EEE67740.1| hypothetical protein OsJ_25431 [Oryza sativa Japonica Group]
          Length = 322

 Score = 79.3 bits (194), Expect(2) = 3e-24
 Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 48  YWLRWQVPVCALIFLLPTVGAFFVIFKVKKPH--LNSTDLWIPCWRGLHPIYLLIYRALV 221
           YWLRWQV VC  + +LPT  A  ++ ++++    L  TDLW+PCW  LHP +LL YRA  
Sbjct: 14  YWLRWQVFVCGALIVLPTAAAAALLPRLRRAAAPLRGTDLWVPCWARLHPGWLLGYRAFA 73

Query: 222 FSFMSWLLYRVAVSDRVFAFFFYT 293
            +    LL R+ V   +  FFFYT
Sbjct: 74  LAAAVALLVRLLVGHGIDVFFFYT 97



 Score = 58.5 bits (140), Expect(2) = 3e-24
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +2

Query: 413 TIISAHGCWEYLKTPVVGNQERDEFLKKHSEDSQPRTTVTSKTNEVGNTVTLQRHHEEEE 592
           T ISAHGCW Y K  +    E  EFL   S+D + R   TS      +   +  +HE+  
Sbjct: 112 TAISAHGCWVYSKKNLKKADESHEFL---SDDVENREFSTSSGEMKRDEEKITNYHEQIA 168

Query: 593 VKQQAGFWGYLMLILYQTCAGAS 661
            +++AG WG  M I+YQT AGA+
Sbjct: 169 NEKRAGLWGRCMQIIYQTSAGAT 191


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