BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011359
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513521.1| transcription initiation factor iib, putativ...    55   1e-07
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...    54   1e-07
ref|XP_002277679.1| PREDICTED: transcription initiation factor I...    54   1e-07
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...    54   1e-07
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...    54   1e-07

>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score = 54.7 bits (130), Expect(2) = 1e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 198 RNQDAILAACLYIACRQEDKPRTVK 124
           RNQDA+LAACLYIACRQEDKPRTVK
Sbjct: 145 RNQDAVLAACLYIACRQEDKPRTVK 169



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34  EICSVANGATK 2
           EICSVANGATK
Sbjct: 170 EICSVANGATK 180


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 198 RNQDAILAACLYIACRQEDKPRTVK 124
           RNQDA+LAACLYIACRQEDKPRTVK
Sbjct: 147 RNQDALLAACLYIACRQEDKPRTVK 171



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34  EICSVANGATK 2
           EICSVANGATK
Sbjct: 172 EICSVANGATK 182


>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
           gi|297734946|emb|CBI17180.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 198 RNQDAILAACLYIACRQEDKPRTVK 124
           RNQDAILAAC+YIACRQEDKPRTVK
Sbjct: 147 RNQDAILAACIYIACRQEDKPRTVK 171



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34  EICSVANGATK 2
           EICSVANGATK
Sbjct: 172 EICSVANGATK 182


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 198 RNQDAILAACLYIACRQEDKPRTVK 124
           RNQDA+LAACLYIACRQEDKPRTVK
Sbjct: 146 RNQDALLAACLYIACRQEDKPRTVK 170



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34  EICSVANGATK 2
           EICSVANGATK
Sbjct: 171 EICSVANGATK 181


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 198 RNQDAILAACLYIACRQEDKPRTVK 124
           RNQDA+LAACLYIACRQEDKPRTVK
Sbjct: 145 RNQDALLAACLYIACRQEDKPRTVK 169



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 34  EICSVANGATK 2
           EICSVANGATK
Sbjct: 170 EICSVANGATK 180