BLASTX nr result

ID: Coptis24_contig00011346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011346
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72895.1| hypothetical protein VITISV_022315 [Vitis vinifera]   154   6e-35
ref|XP_003635018.1| PREDICTED: uncharacterized protein LOC100853...   153   1e-34
ref|XP_002278125.1| PREDICTED: uncharacterized protein LOC100267...   150   1e-33
ref|XP_002520558.1| brg-1 associated factor, putative [Ricinus c...   149   3e-33
ref|XP_003549577.1| PREDICTED: uncharacterized protein LOC100804...   141   5e-31

>emb|CAN72895.1| hypothetical protein VITISV_022315 [Vitis vinifera]
          Length = 339

 Score =  154 bits (389), Expect = 6e-35
 Identities = 102/230 (44%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
 Frame = +2

Query: 878  MVSDEEIVNGIESLLRQGTTTQ--TLNGVIQQLEEKLGLDLSHKVGFIRDLLTNPHFLRP 1051
            MVSD++I  G+E+LLRQ       +LNGV++QLE KLGLDLSHK  FIRD ++   FL  
Sbjct: 1    MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAXFIRDQIS---FLLR 57

Query: 1052 XXXXXXXXKDHFPLQQYPH---PQPQFYSHSASQQFIPSHFAXXXXXXXXXXXXXEDVHF 1222
                    KDHF LQQ+P    P PQ  SH A Q   P                 ED++F
Sbjct: 58   SHPQPLPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP---------------PEDLNF 102

Query: 1223 RYPTLQGQFQHHGFNPHLQRHSFNPNPNLHLQLQXXXXXXXXXXXXXXXXXXADAGPPET 1402
             YP  Q Q       P  Q H   P     LQ                    A +   + 
Sbjct: 103  LYPLPQPQQHQPQTQPQPQPHHL-PKGEAFLQ-------------------NAASVAAQA 142

Query: 1403 KKESASTGTKRRGGPGGLNKVCGVSPELQVIVGEPALPRTQIVKQLWAYI 1552
             KESA    KRRGG GGLNKVCGVS ELQ +VGEP +PRTQIVKQLWAYI
Sbjct: 143  PKESAPAAXKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYI 192


>ref|XP_003635018.1| PREDICTED: uncharacterized protein LOC100853436 [Vitis vinifera]
            gi|297741808|emb|CBI33113.3| unnamed protein product
            [Vitis vinifera]
          Length = 344

 Score =  153 bits (387), Expect = 1e-34
 Identities = 102/230 (44%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
 Frame = +2

Query: 878  MVSDEEIVNGIESLLRQGTTTQ--TLNGVIQQLEEKLGLDLSHKVGFIRDLLTNPHFLRP 1051
            MVSD++I  G+E+LLRQ       +LNGV++QLE KLGLDLSHK  FIRD ++   FL  
Sbjct: 1    MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAVFIRDQIS---FLLR 57

Query: 1052 XXXXXXXXKDHFPLQQYPH---PQPQFYSHSASQQFIPSHFAXXXXXXXXXXXXXEDVHF 1222
                    KDHF LQQ+P    P PQ  SH A Q   P                 ED++F
Sbjct: 58   SHPQPLPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP---------------PEDLNF 102

Query: 1223 RYPTLQGQFQHHGFNPHLQRHSFNPNPNLHLQLQXXXXXXXXXXXXXXXXXXADAGPPET 1402
             YP  Q Q       P  Q H   P     LQ                    A +   + 
Sbjct: 103  LYPLPQPQQHQPQTQPQPQPHHL-PKGEAFLQ-------------------NAASVAAQA 142

Query: 1403 KKESASTGTKRRGGPGGLNKVCGVSPELQVIVGEPALPRTQIVKQLWAYI 1552
             KESA    KRRGG GGLNKVCGVS ELQ +VGEP +PRTQIVKQLWAYI
Sbjct: 143  PKESAPAAPKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYI 192


>ref|XP_002278125.1| PREDICTED: uncharacterized protein LOC100267408 [Vitis vinifera]
            gi|297741803|emb|CBI33108.3| unnamed protein product
            [Vitis vinifera]
          Length = 347

 Score =  150 bits (378), Expect = 1e-33
 Identities = 102/233 (43%), Positives = 119/233 (51%), Gaps = 8/233 (3%)
 Frame = +2

Query: 878  MVSDEEIVNGIESLLRQGTTTQ--TLNGVIQQLEEKLGLDLSHKVGFIRDLLTNPHFLRP 1051
            MVSD++I  G+E+LLRQ       +LNG+++QLE KLGLDLSHK  FIRD ++   FL  
Sbjct: 1    MVSDQDIAKGVETLLRQSEPNSFTSLNGIVKQLEAKLGLDLSHKAVFIRDQIS---FLLR 57

Query: 1052 XXXXXXXXKDHFPLQQYPH---PQPQFYSHSASQQFIPSHFAXXXXXXXXXXXXXEDVHF 1222
                    KDHF LQQ+P    P PQ  SH A Q   P                 ED++F
Sbjct: 58   SHPQPLPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPP---------------PEDLNF 102

Query: 1223 RYPTLQGQFQHHGF---NPHLQRHSFNPNPNLHLQLQXXXXXXXXXXXXXXXXXXADAGP 1393
             YP  Q Q Q        P  Q H   P     LQ                    A +  
Sbjct: 103  LYPLPQPQPQTQTQPQPQPQTQPHHL-PKGEAFLQ-------------------NAASVA 142

Query: 1394 PETKKESASTGTKRRGGPGGLNKVCGVSPELQVIVGEPALPRTQIVKQLWAYI 1552
             +  KESA    KRRGG GGLNKVCGVS ELQ +VGEP +PRTQIVKQLWAYI
Sbjct: 143  AQAPKESAPAAAKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYI 195


>ref|XP_002520558.1| brg-1 associated factor, putative [Ricinus communis]
            gi|223540218|gb|EEF41791.1| brg-1 associated factor,
            putative [Ricinus communis]
          Length = 397

 Score =  149 bits (375), Expect = 3e-33
 Identities = 106/254 (41%), Positives = 122/254 (48%), Gaps = 29/254 (11%)
 Frame = +2

Query: 878  MVSDEEIVNGIESLLRQG--TTTQTLNGVIQQLEEKLGLDLSHKVGFIRD-----LLTNP 1036
            MVSD++I  G+E++LRQ       +L+GV+QQLE KLGLDLSHK GFIRD     L ++P
Sbjct: 8    MVSDQDIAKGVETVLRQSDPNAVTSLDGVVQQLEAKLGLDLSHKAGFIRDQISLLLRSHP 67

Query: 1037 HFLRPXXXXXXXXKDHFPL-------QQYPHPQPQ-----------FYSHSASQQFIPSH 1162
              +            H P        QQ PH  PQ              H   QQF P+H
Sbjct: 68   TTVTTATSTSSSAVTHQPAPPPLQQQQQQPHLHPQNLHLSQKDHFALQHHPQFQQF-PAH 126

Query: 1163 FA----XXXXXXXXXXXXXEDVHFRYPTLQGQFQHHGFNPHLQRHSFNPNPNLHLQLQXX 1330
            FA                 +D++FR P  Q   Q H   P  Q       P         
Sbjct: 127  FALNPHHPHHHHHHHQVFPQDLNFRQP--QVPAQTHASVPPQQHQQQRQQP--------- 175

Query: 1331 XXXXXXXXXXXXXXXXADAGPPETKKESASTGTKRRGGPGGLNKVCGVSPELQVIVGEPA 1510
                            A   P E  KESA  G KRRGGPGGLNKVCGVSPELQ IVGEPA
Sbjct: 176  ----PPIAKNEVFSQNATPVPSELPKESAPVGAKRRGGPGGLNKVCGVSPELQAIVGEPA 231

Query: 1511 LPRTQIVKQLWAYI 1552
            LPRT+IVKQLWAYI
Sbjct: 232  LPRTEIVKQLWAYI 245


>ref|XP_003549577.1| PREDICTED: uncharacterized protein LOC100804281 [Glycine max]
          Length = 329

 Score =  141 bits (355), Expect = 5e-31
 Identities = 92/230 (40%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
 Frame = +2

Query: 878  MVSDEEIVNGIESLLRQG--TTTQTLNGVIQQLEEKLGLDLSHKVGFIRDLLTNPHFLRP 1051
            MV+D++I  G+ESLLR     +  T+NGV+QQLE KLGLDLSHK  FIRD +   H LR 
Sbjct: 1    MVTDQDIAKGVESLLRHSDPNSITTVNGVVQQLEAKLGLDLSHKASFIRDQID--HLLRS 58

Query: 1052 XXXXXXXXKDHFPLQQYPHPQP---QFYSHSASQQFIPSHFAXXXXXXXXXXXXXEDVHF 1222
                        P    PHP P    +++      F  +HFA                HF
Sbjct: 59   Q-----------PQTFAPHPPPLHKDYFAPHTQLHFPTTHFAP---------------HF 92

Query: 1223 RYPTLQGQFQHHGFNPHLQRHSFNPNPNLHLQLQXXXXXXXXXXXXXXXXXXADAGPPET 1402
                     QH    P  +  +F P                            +  PP+ 
Sbjct: 93   ALHDEINFLQHPHPPPPRKVETFPPQ---------------------------NVAPPQV 125

Query: 1403 KKESASTGTKRRGGPGGLNKVCGVSPELQVIVGEPALPRTQIVKQLWAYI 1552
             KES  TG+KRRGG GGLNKVCGVSPELQ +VGEPA+PRT+IV+QLWAYI
Sbjct: 126  PKESVQTGSKRRGGAGGLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYI 175


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