BLASTX nr result

ID: Coptis24_contig00011345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011345
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-...   583   e-164
ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-...   573   e-161
ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-...   571   e-160
ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-...   566   e-159

>ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
            vinifera] gi|297743555|emb|CBI36422.3| unnamed protein
            product [Vitis vinifera]
          Length = 455

 Score =  583 bits (1502), Expect = e-164
 Identities = 298/386 (77%), Positives = 319/386 (82%)
 Frame = -2

Query: 1285 RSFTVSATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 1106
            R   V+A TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 1105 NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 926
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 925  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 746
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 745  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 566
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLERIES 
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIESA 307

Query: 565  VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGVTSVSVVCEG 386
            V  E  K                                        DPGV+SVS+VCEG
Sbjct: 308  VNSEGVKEDHATHSHDHDHDHDHHDHHHHEHDHRHEHNDHHSHDHTHDPGVSSVSIVCEG 367

Query: 385  SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDES 206
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 368  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 427

Query: 205  RINKIVFIGKNLDAEALEKGFKSCLL 128
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 428  RVNKIVFIGKNLDGKELEKGFKACLL 453


>ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|222835960|gb|EEE74381.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  575 bits (1482), Expect = e-161
 Identities = 298/390 (76%), Positives = 322/390 (82%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1285 RSFTVSATTTESG----SSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRI 1118
            R F+VSAT T S      SD  TKIPPD+RIPATIITGFLGSGKTTLLNHILTADHGKRI
Sbjct: 2    RRFSVSATATTSAPQTDDSDLTTKIPPDNRIPATIITGFLGSGKTTLLNHILTADHGKRI 61

Query: 1117 AVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDH 938
            AVIENE+GEVDIDGSLVA+KT GAEDI+MLNNGCLCCTVRGDLVRMIA+LV +KK KFDH
Sbjct: 62   AVIENEYGEVDIDGSLVAAKTAGAEDIIMLNNGCLCCTVRGDLVRMIADLVKRKKDKFDH 121

Query: 937  IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVE 758
            IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGV+TLVDAKHA LHLDEVKPKG+VNEAVE
Sbjct: 122  IVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVVTLVDAKHAPLHLDEVKPKGVVNEAVE 181

Query: 757  QIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLER 578
            QIAYADR+I+NKTDLVGE+EI SLVQRI++IN+MA+LKR  +G VDLDYVLGIGGFDLER
Sbjct: 182  QIAYADRVILNKTDLVGEQEIASLVQRIRNINRMANLKRTQYGKVDLDYVLGIGGFDLER 241

Query: 577  IESVVTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGVTSVSV 398
            IES V+DE  K                                        DPGV+SVS+
Sbjct: 242  IESAVSDEDRK--EDHASHDHDHDHHHHHHHDEHDHEHDHHDDHHSHDHTHDPGVSSVSI 299

Query: 397  VCEGSLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWG 218
            VCEGSLDLEKAN WLGTLLMERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WG
Sbjct: 300  VCEGSLDLEKANFWLGTLLMERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWG 359

Query: 217  PDESRINKIVFIGKNLDAEALEKGFKSCLL 128
            P+E R NKIVFIGKNLDA+ LEKGFK+CLL
Sbjct: 360  PNEPRTNKIVFIGKNLDAQELEKGFKACLL 389


>ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
            gi|449513465|ref|XP_004164332.1| PREDICTED: COBW
            domain-containing protein 2-like [Cucumis sativus]
          Length = 451

 Score =  573 bits (1478), Expect = e-161
 Identities = 301/403 (74%), Positives = 325/403 (80%), Gaps = 6/403 (1%)
 Frame = -2

Query: 1318 PLLQVTNKTSIRSFTVSATT----TESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLN 1151
            PL  + +K +   F+V A+T    +ES  S+ LTKIPPD+RIPATIITGFLGSGKTTLLN
Sbjct: 48   PLPALQSKRTSPRFSVFASTATPTSESDESEVLTKIPPDNRIPATIITGFLGSGKTTLLN 107

Query: 1150 HILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAE 971
            HILTADHGKRIAVIENEFGEVDIDGSLVA+KTTGAEDIVMLNNGCLCCTVRGDLVRMI+E
Sbjct: 108  HILTADHGKRIAVIENEFGEVDIDGSLVAAKTTGAEDIVMLNNGCLCCTVRGDLVRMISE 167

Query: 970  LVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEV 791
            LVNKKKGKFDHIVIETTGLANP+PIIQTFYAED VFNDVKLDGV+TLVDAKHAT HLDEV
Sbjct: 168  LVNKKKGKFDHIVIETTGLANPSPIIQTFYAEDSVFNDVKLDGVVTLVDAKHATFHLDEV 227

Query: 790  KPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDY 611
            KP+G+VNEAVEQIAYADRIIVNKTDLVGE +I  LVQRIK IN+MA LKR  +G VDLDY
Sbjct: 228  KPEGVVNEAVEQIAYADRIIVNKTDLVGEPQIADLVQRIKKINRMAELKRTKYGKVDLDY 287

Query: 610  VLGIGGFDLERIESVVTDESSK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 437
            VLGIGGFDLERI+S V  ES +                                      
Sbjct: 288  VLGIGGFDLERIDSSVDTESREDHAHSHHEDHKHSHDHDHDHHHHDHDHEHDHKHDHHSH 347

Query: 436  XXXXDPGVTSVSVVCEGSLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGV 257
                DPGV+SVS+VCEG LDLEKANMWLGTLL++ SDDIYRMKGLLSVQGM ERFVFQGV
Sbjct: 348  DHTHDPGVSSVSIVCEGILDLEKANMWLGTLLLDHSDDIYRMKGLLSVQGMDERFVFQGV 407

Query: 256  HDIFQGSPDRPWGPDESRINKIVFIGKNLDAEALEKGFKSCLL 128
            HDIFQGSPDR WGPDE RINKIVFIGKNLD E LEKGFK+CLL
Sbjct: 408  HDIFQGSPDRLWGPDEPRINKIVFIGKNLDGEELEKGFKACLL 450


>ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
            vinifera]
          Length = 437

 Score =  571 bits (1472), Expect = e-160
 Identities = 294/386 (76%), Positives = 318/386 (82%)
 Frame = -2

Query: 1285 RSFTVSATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 1106
            R   V+A TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 1105 NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 926
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 925  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 746
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 745  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 566
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLERI+S 
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERIKSR 307

Query: 565  VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGVTSVSVVCEG 386
               +  +                                        DPGV+SVS+VCEG
Sbjct: 308  FFQDHER------------------CLVGHMHANAEHNDHHSHDHTHDPGVSSVSIVCEG 349

Query: 385  SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDES 206
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 350  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 409

Query: 205  RINKIVFIGKNLDAEALEKGFKSCLL 128
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 410  RVNKIVFIGKNLDGKELEKGFKACLL 435


>ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
            vinifera]
          Length = 426

 Score =  566 bits (1458), Expect = e-159
 Identities = 292/386 (75%), Positives = 314/386 (81%)
 Frame = -2

Query: 1285 RSFTVSATTTESGSSDALTKIPPDHRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 1106
            R   V+A TT+S  SD LTKIPPD RIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE
Sbjct: 68   RFSAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTTLLNHILTADHGKRIAVIE 127

Query: 1105 NEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMIAELVNKKKGKFDHIVIE 926
            NE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI+ELVNKKKGKFDHIVIE
Sbjct: 128  NEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMISELVNKKKGKFDHIVIE 187

Query: 925  TTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLDEVKPKGIVNEAVEQIAY 746
            TTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLDEVKPKG+VNEAVEQIAY
Sbjct: 188  TTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLDEVKPKGVVNEAVEQIAY 247

Query: 745  ADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAMFGNVDLDYVLGIGGFDLERIESV 566
            ADRIIVNK DLVGE EI SLVQRIK+IN++A LKR  FG VDLDYVLG+GGFDLER+   
Sbjct: 248  ADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDLDYVLGVGGFDLERL--- 304

Query: 565  VTDESSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPGVTSVSVVCEG 386
                                                           DPGV+SVS+VCEG
Sbjct: 305  --------------------------FLYLLFFTYHHNDHHSHDHTHDPGVSSVSIVCEG 338

Query: 385  SLDLEKANMWLGTLLMERSDDIYRMKGLLSVQGMSERFVFQGVHDIFQGSPDRPWGPDES 206
            SLDLEKAN+WLGTLL+ERS+DIYRMKGLLSVQGM ERFVFQGVHDIFQGSPDR WGPDE 
Sbjct: 339  SLDLEKANIWLGTLLLERSEDIYRMKGLLSVQGMDERFVFQGVHDIFQGSPDRLWGPDEP 398

Query: 205  RINKIVFIGKNLDAEALEKGFKSCLL 128
            R+NKIVFIGKNLD + LEKGFK+CLL
Sbjct: 399  RVNKIVFIGKNLDGKELEKGFKACLL 424


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