BLASTX nr result

ID: Coptis24_contig00011339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011339
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, c...   288   4e-76
ref|NP_001241559.1| uncharacterized protein LOC100800753 [Glycin...   284   8e-75
ref|XP_003538500.1| PREDICTED: uroporphyrinogen decarboxylase, c...   283   2e-74
ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ri...   283   2e-74
ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, c...   281   5e-74

>ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Vitis vinifera] gi|297736517|emb|CBI25388.3| unnamed
           protein product [Vitis vinifera]
          Length = 392

 Score =  288 bits (738), Expect = 4e-76
 Identities = 148/197 (75%), Positives = 166/197 (84%)
 Frame = +3

Query: 27  MSCVYXXXXXXXXTVRNTPKTNSFYSTSRSKLKINCTALGETAAETKSVSAAEPLLLAAV 206
           MSC+Y         +  + ++ S  S S SK +I C ALG T AE   ++A EPLLL AV
Sbjct: 1   MSCIYSSSISSFSALSTSLRSRS-PSPSNSKPRIYC-ALGGTVAEPIIINATEPLLLTAV 58

Query: 207 RGENVERPPVWLMRQAGRYMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKPDGVI 386
           RGE+VERPPVWLMRQAGRYMKSYQ IC+KYPSFRERSENVDLVVEISLQPWKVFKPDGVI
Sbjct: 59  RGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVI 118

Query: 387 LFSDILTPLSGMNIPFDIVKGKGPLIFNPVKEAADVDEVREFVPEESVPYVGEALTILRK 566
           LFSDILTPLSGMNIPFDI+KGKGP+IFNP++ A DV++VREFVPE+SVPYVGEALTILRK
Sbjct: 119 LFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRK 178

Query: 567 EVNNEAAVLGFVGAPFT 617
           EV+N AAVLGFVGAPFT
Sbjct: 179 EVDNAAAVLGFVGAPFT 195


>ref|NP_001241559.1| uncharacterized protein LOC100800753 [Glycine max]
           gi|255639814|gb|ACU20200.1| unknown [Glycine max]
          Length = 387

 Score =  284 bits (727), Expect = 8e-75
 Identities = 142/179 (79%), Positives = 158/179 (88%)
 Frame = +3

Query: 81  PKTNSFYSTSRSKLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGR 260
           P+ +  + +S+S   I+CT  G T AE KS +A EPLLL AVRG +VERPPVWLMRQAGR
Sbjct: 13  PRKSICFFSSKSTTPISCTLQG-TVAEPKSTAAGEPLLLNAVRGIDVERPPVWLMRQAGR 71

Query: 261 YMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDI 440
           YMKSYQ IC+KYPSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPLSGMNIPFDI
Sbjct: 72  YMKSYQTICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDI 131

Query: 441 VKGKGPLIFNPVKEAADVDEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFT 617
           VKGKGP+IF+P+  AA VD+VREF+PEESVPYVGEALTILRKEV+N+AAVLGFVGAPFT
Sbjct: 132 VKGKGPVIFDPIHTAAQVDQVREFIPEESVPYVGEALTILRKEVDNKAAVLGFVGAPFT 190


>ref|XP_003538500.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Glycine max]
          Length = 387

 Score =  283 bits (724), Expect = 2e-74
 Identities = 141/179 (78%), Positives = 159/179 (88%)
 Frame = +3

Query: 81  PKTNSFYSTSRSKLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGR 260
           P+ ++   +S+S   I+CT  G T AE KS +AAEPLLL AVRG +VERPPVWLMRQAGR
Sbjct: 13  PRKSTCVFSSKSTTPISCTLQG-TVAEPKSTAAAEPLLLNAVRGIDVERPPVWLMRQAGR 71

Query: 261 YMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDI 440
           YMKSYQ IC+KYPSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPLSGMNIPFDI
Sbjct: 72  YMKSYQTICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDI 131

Query: 441 VKGKGPLIFNPVKEAADVDEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFT 617
           VKGKGP+IF+P+  +A VD+V+EF+PEESVPYVGEALTILRKEV+N+AAVLGFVGAPFT
Sbjct: 132 VKGKGPVIFDPIHTSAQVDQVKEFIPEESVPYVGEALTILRKEVDNKAAVLGFVGAPFT 190


>ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
           gi|223539973|gb|EEF41551.1| uroporphyrinogen
           decarboxylase, putative [Ricinus communis]
          Length = 389

 Score =  283 bits (723), Expect = 2e-74
 Identities = 146/201 (72%), Positives = 165/201 (82%), Gaps = 4/201 (1%)
 Frame = +3

Query: 27  MSCVYXXXXXXXXTVRNTPKTNSFYSTSRSKLK----INCTALGETAAETKSVSAAEPLL 194
           MSC+         ++ +    ++ YS+ R  +     I+C+  G T AE K  S AEPLL
Sbjct: 1   MSCI--------CSISSISSFSTLYSSPRKSVSKPPIIHCSLPG-TVAEPKPASVAEPLL 51

Query: 195 LAAVRGENVERPPVWLMRQAGRYMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKP 374
           L AVRGE+VERPPVWLMRQAGRYMKSYQ IC+KYPSFRERSENVDLVVEISLQPW VFKP
Sbjct: 52  LNAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWNVFKP 111

Query: 375 DGVILFSDILTPLSGMNIPFDIVKGKGPLIFNPVKEAADVDEVREFVPEESVPYVGEALT 554
           DGVILFSDILTPLSGMNIPFDIVKGKGP+IFNP++ A DVD+VREFVPEESVPYVGE+LT
Sbjct: 112 DGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPLRTAEDVDQVREFVPEESVPYVGESLT 171

Query: 555 ILRKEVNNEAAVLGFVGAPFT 617
           ILRKEV+N+AAVLGFVGAPFT
Sbjct: 172 ILRKEVDNKAAVLGFVGAPFT 192


>ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
           [Cucumis sativus]
          Length = 392

 Score =  281 bits (720), Expect = 5e-74
 Identities = 139/167 (83%), Positives = 154/167 (92%)
 Frame = +3

Query: 117 KLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGRYMKSYQNICQKY 296
           K +I+C+ LG T AE K  ++AEPLLL AVRGE+VERPPVWLMRQAGRYMKSYQ IC+KY
Sbjct: 30  KPRIHCS-LGGTVAEPKPTTSAEPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQVICEKY 88

Query: 297 PSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPLIFNPV 476
           PSFR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGP+I NP+
Sbjct: 89  PSFRQRSENTDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIANPI 148

Query: 477 KEAADVDEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFT 617
            EAA VD+VREF+PEE+VPYVGEALTILRKEV+N+AAVLGFVGAPFT
Sbjct: 149 SEAAQVDQVREFIPEENVPYVGEALTILRKEVDNKAAVLGFVGAPFT 195


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