BLASTX nr result
ID: Coptis24_contig00011338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011338 (734 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK48850.1| unknown [Lotus japonicus] 204 1e-50 ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3,... 199 5e-49 ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3,... 194 1e-47 ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3,... 194 1e-47 ref|XP_002510727.1| conserved hypothetical protein [Ricinus comm... 194 1e-47 >gb|AFK48850.1| unknown [Lotus japonicus] Length = 250 Score = 204 bits (520), Expect = 1e-50 Identities = 95/129 (73%), Positives = 116/129 (89%) Frame = -3 Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415 +SLTAFYP+E++SSNVSV I+GLG D+TK+ESFGKVDEFAETLVSGLDRSW+ PPGVAAK Sbjct: 120 KSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPPGVAAK 179 Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235 LINSK S G+YYIEYSLQ PGES RH++S +GM + GWYN+LYTVTGQ+ E+E++KY S+ Sbjct: 180 LINSKPSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETDKYASE 239 Query: 234 IVKAVSSFR 208 I KAV+SF+ Sbjct: 240 IQKAVTSFK 248 >ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis vinifera] gi|297745601|emb|CBI40766.3| unnamed protein product [Vitis vinifera] Length = 253 Score = 199 bits (506), Expect = 5e-49 Identities = 92/129 (71%), Positives = 113/129 (87%) Frame = -3 Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415 +S+TAFYPEE++ SNVSV+I+GLGAD+T+LESFGKVD FAE LV+GLDRSWQ PPG+AAK Sbjct: 123 KSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDRSWQRPPGIAAK 182 Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235 LI+ +A+NG YYIEY LQ PGES RH+FS +GM + GWYN+LYTVTGQ+ E+ESEK+ SK Sbjct: 183 LIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQYLEEESEKFSSK 242 Query: 234 IVKAVSSFR 208 I K V+SFR Sbjct: 243 IEKVVASFR 251 >ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like [Glycine max] Length = 248 Score = 194 bits (494), Expect = 1e-47 Identities = 87/129 (67%), Positives = 115/129 (89%) Frame = -3 Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415 +S+TAFYP ++++SNVSV+I+GLG D+T++ESFGKVDEFA+TLVSGLDRSW+ PPGVAAK Sbjct: 118 KSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 177 Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235 LI+ K+SNG+YYIEY LQ PGES R+++S +GM S GWYN+LYTVTGQ+ E++++KY SK Sbjct: 178 LIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTDKYASK 237 Query: 234 IVKAVSSFR 208 + K V+SFR Sbjct: 238 VQKVVASFR 246 >ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like [Glycine max] Length = 244 Score = 194 bits (494), Expect = 1e-47 Identities = 88/129 (68%), Positives = 115/129 (89%) Frame = -3 Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415 +S+TAFYP +++SNVSV+I+GLG D+T++ESFGKVDEFA+TLVSGLDRSW+ PPGVAAK Sbjct: 114 KSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 173 Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235 LI+ K+S+G+YYIEYSLQ PGES R+++S +GM S GWYN+LYTVTGQ+ E+E++KY SK Sbjct: 174 LIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASK 233 Query: 234 IVKAVSSFR 208 + K V+SFR Sbjct: 234 VQKVVASFR 242 >ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis] gi|223551428|gb|EEF52914.1| conserved hypothetical protein [Ricinus communis] Length = 264 Score = 194 bits (494), Expect = 1e-47 Identities = 90/129 (69%), Positives = 111/129 (86%) Frame = -3 Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415 +S+TAFYPEE++ S+VSV+I+GLG D+T++ESFGKV+ FAETLVSGLDRSWQ PPGVAAK Sbjct: 134 KSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVAAK 193 Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235 LI+ KA+ G+YYIEY+LQ PGE +H+FS LGM GWYN+LYTVTGQF E+ESE Y SK Sbjct: 194 LIDCKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYGSK 253 Query: 234 IVKAVSSFR 208 + K VSSF+ Sbjct: 254 VQKVVSSFK 262