BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011338
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48850.1| unknown [Lotus japonicus]                              204   1e-50
ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3,...   199   5e-49
ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3,...   194   1e-47
ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3,...   194   1e-47
ref|XP_002510727.1| conserved hypothetical protein [Ricinus comm...   194   1e-47

>gb|AFK48850.1| unknown [Lotus japonicus]
          Length = 250

 Score =  204 bits (520), Expect = 1e-50
 Identities = 95/129 (73%), Positives = 116/129 (89%)
 Frame = -3

Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415
           +SLTAFYP+E++SSNVSV I+GLG D+TK+ESFGKVDEFAETLVSGLDRSW+ PPGVAAK
Sbjct: 120 KSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPPGVAAK 179

Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235
           LINSK S G+YYIEYSLQ PGES RH++S +GM + GWYN+LYTVTGQ+ E+E++KY S+
Sbjct: 180 LINSKPSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETDKYASE 239

Query: 234 IVKAVSSFR 208
           I KAV+SF+
Sbjct: 240 IQKAVTSFK 248


>ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
           vinifera] gi|297745601|emb|CBI40766.3| unnamed protein
           product [Vitis vinifera]
          Length = 253

 Score =  199 bits (506), Expect = 5e-49
 Identities = 92/129 (71%), Positives = 113/129 (87%)
 Frame = -3

Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415
           +S+TAFYPEE++ SNVSV+I+GLGAD+T+LESFGKVD FAE LV+GLDRSWQ PPG+AAK
Sbjct: 123 KSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDRSWQRPPGIAAK 182

Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235
           LI+ +A+NG YYIEY LQ PGES RH+FS +GM + GWYN+LYTVTGQ+ E+ESEK+ SK
Sbjct: 183 LIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQYLEEESEKFSSK 242

Query: 234 IVKAVSSFR 208
           I K V+SFR
Sbjct: 243 IEKVVASFR 251


>ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
           [Glycine max]
          Length = 248

 Score =  194 bits (494), Expect = 1e-47
 Identities = 87/129 (67%), Positives = 115/129 (89%)
 Frame = -3

Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415
           +S+TAFYP ++++SNVSV+I+GLG D+T++ESFGKVDEFA+TLVSGLDRSW+ PPGVAAK
Sbjct: 118 KSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 177

Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235
           LI+ K+SNG+YYIEY LQ PGES R+++S +GM S GWYN+LYTVTGQ+ E++++KY SK
Sbjct: 178 LIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTDKYASK 237

Query: 234 IVKAVSSFR 208
           + K V+SFR
Sbjct: 238 VQKVVASFR 246


>ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
           [Glycine max]
          Length = 244

 Score =  194 bits (494), Expect = 1e-47
 Identities = 88/129 (68%), Positives = 115/129 (89%)
 Frame = -3

Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415
           +S+TAFYP  +++SNVSV+I+GLG D+T++ESFGKVDEFA+TLVSGLDRSW+ PPGVAAK
Sbjct: 114 KSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVAAK 173

Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235
           LI+ K+S+G+YYIEYSLQ PGES R+++S +GM S GWYN+LYTVTGQ+ E+E++KY SK
Sbjct: 174 LIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYASK 233

Query: 234 IVKAVSSFR 208
           + K V+SFR
Sbjct: 234 VQKVVASFR 242


>ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
           gi|223551428|gb|EEF52914.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score =  194 bits (494), Expect = 1e-47
 Identities = 90/129 (69%), Positives = 111/129 (86%)
 Frame = -3

Query: 594 RSLTAFYPEESTSSNVSVLISGLGADYTKLESFGKVDEFAETLVSGLDRSWQNPPGVAAK 415
           +S+TAFYPEE++ S+VSV+I+GLG D+T++ESFGKV+ FAETLVSGLDRSWQ PPGVAAK
Sbjct: 134 KSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVAAK 193

Query: 414 LINSKASNGLYYIEYSLQKPGESSRHIFSVLGMGSFGWYNKLYTVTGQFFEDESEKYRSK 235
           LI+ KA+ G+YYIEY+LQ PGE  +H+FS LGM   GWYN+LYTVTGQF E+ESE Y SK
Sbjct: 194 LIDCKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYGSK 253

Query: 234 IVKAVSSFR 208
           + K VSSF+
Sbjct: 254 VQKVVSSFK 262