BLASTX nr result
ID: Coptis24_contig00011334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011334
(1017 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003594811.1| hypothetical protein MTR_2g034890 [Medicago ... 100 8e-39
ref|XP_003550549.1| PREDICTED: uncharacterized protein LOC100804... 121 3e-25
ref|XP_002519182.1| conserved hypothetical protein [Ricinus comm... 112 4e-25
ref|XP_002311404.1| predicted protein [Populus trichocarpa] gi|2... 115 1e-23
ref|XP_003594810.1| hypothetical protein MTR_2g034880 [Medicago ... 115 2e-23
>ref|XP_003594811.1| hypothetical protein MTR_2g034890 [Medicago truncatula]
gi|355483859|gb|AES65062.1| hypothetical protein
MTR_2g034890 [Medicago truncatula]
Length = 243
Score = 100 bits (249), Expect(3) = 8e-39
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2
Query: 767 TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGLY 946
T +CFAV E+LL+ G+ VESGHL W++PR +C +R GLF +AGVF LTTVF+A+GLY
Sbjct: 130 TTWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYAIREGLFSAAGVFALTTVFIAAGLY 189
Query: 947 LTALRALRLSQEEEIVRREVL 1009
LT LRA R+S+ V REVL
Sbjct: 190 LTILRAQRMSEVVATVGREVL 210
Score = 80.9 bits (198), Expect(3) = 8e-39
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 382 QATWVLSST-EGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPP 558
Q TW+++ + G++YEC Y+G+GK PLLCSA AF+ LAI +VM H Y+L+AVSK+ PP
Sbjct: 47 QVTWIMNKDGKDKGDKYECAYNGNGKVPLLCSACAFVGLAIALVMEHIYMLIAVSKS-PP 105
Query: 559 ALIAWNPDDSRQANSLTWHAALHVRLKLC 645
+L+ W+ D S + ++ ++ +C
Sbjct: 106 SLLDWDNDSSSVKSLISLAGFFYITTWIC 134
Score = 26.9 bits (58), Expect(3) = 8e-39
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 197 MPVTHADLAPGRRTSDLGSKWGAFLM 274
M VTHADL P +T DL SK FL+
Sbjct: 1 MAVTHADLEPKSKT-DLSSKTVVFLV 25
>ref|XP_003550549.1| PREDICTED: uncharacterized protein LOC100804457 [Glycine max]
Length = 277
Score = 121 bits (303), Expect = 3e-25
Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 9/144 (6%)
Frame = +2
Query: 611 GTLPCMCAS-SFV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLS------- 766
G +P +CAS +F+ + + +LV+H ++ ++ + + + K+L+
Sbjct: 96 GKMPLLCASCAFI--GLAIAMLVEHTFLLMAVSNSSPALLTLDPDSASAKSLTWQSGFFF 153
Query: 767 -TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGL 943
T +CFAVGE+LL+ GV VESGHL WS+P+ SCL +R GLF +AGVF L TVFLAS L
Sbjct: 154 VTTWICFAVGEILLLAGVSVESGHLKNWSKPKPSCLSIREGLFCAAGVFALATVFLASAL 213
Query: 944 YLTALRALRLSQEEEIVRREVLNT 1015
YLTALRALR+SQE+E VRREVL T
Sbjct: 214 YLTALRALRISQEQENVRREVLMT 237
Score = 76.3 bits (186), Expect(2) = 1e-16
Identities = 37/76 (48%), Positives = 55/76 (72%)
Frame = +1
Query: 391 WVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPALIA 570
W+ ++ G G + EC+YSGSGK PLLC++ AF+ LAI M++ H+++L+AVS + PAL+
Sbjct: 76 WMSTAEHGKGSKSECVYSGSGKMPLLCASCAFIGLAIAMLVEHTFLLMAVSNS-SPALLT 134
Query: 571 WNPDDSRQANSLTWHA 618
+P DS A SLTW +
Sbjct: 135 LDP-DSASAKSLTWQS 149
Score = 37.0 bits (84), Expect(2) = 1e-16
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 194 KMPVTHADLAPGRRTSDLGSKWGAFLM 274
KM VTHADL P RR +D SK GAF +
Sbjct: 24 KMAVTHADLEPRRRKTDFSSKTGAFFV 50
>ref|XP_002519182.1| conserved hypothetical protein [Ricinus communis]
gi|223541497|gb|EEF43046.1| conserved hypothetical
protein [Ricinus communis]
Length = 264
Score = 100 bits (248), Expect(2) = 4e-25
Identities = 45/79 (56%), Positives = 60/79 (75%)
Frame = +1
Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
+ TWV S+ EG E +EC+YSGSGKTPLLC+A AF+ LAIGMV+ H Y+L+A+SK+PP
Sbjct: 51 RVTWVASNGEGSAENHECIYSGSGKTPLLCAAVAFVGLAIGMVVEHMYILIAISKSPPSV 110
Query: 562 LIAWNPDDSRQANSLTWHA 618
LI W+ +S A ++TW A
Sbjct: 111 LITWD-SNSPPAKTITWQA 128
Score = 41.6 bits (96), Expect(2) = 4e-25
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 200 PVTHADLAPGRRTSDLGSKWGAFL 271
P+THADLAPG R++DLGSK AFL
Sbjct: 4 PITHADLAPGPRSTDLGSKTAAFL 27
Score = 112 bits (281), Expect = 1e-22
Identities = 67/142 (47%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
Frame = +2
Query: 611 GTLPCMCAS-SFV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLS------- 766
G P +CA+ +FV I + + + +IS P S I+ + N P KT++
Sbjct: 74 GKTPLLCAAVAFVGLAIGMVVEHMYILIAISKSP-PSVLITWDSNSPPAKTITWQAGFFF 132
Query: 767 -TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGL 943
VCFAVGE+LL+IG+ VESGHL WSRP+ SCLV++ GLF +AGV L TVFLA+GL
Sbjct: 133 VATWVCFAVGEILLLIGLSVESGHLKNWSRPKSSCLVIKQGLFSAAGVLSLATVFLAAGL 192
Query: 944 YLTALRALRLSQEEEIVRREVL 1009
Y+ ALRA R+SQE E +R+++L
Sbjct: 193 YVIALRAQRISQEHENLRQQIL 214
>ref|XP_002311404.1| predicted protein [Populus trichocarpa] gi|222851224|gb|EEE88771.1|
predicted protein [Populus trichocarpa]
Length = 272
Score = 115 bits (289), Expect = 1e-23
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +2
Query: 767 TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGLY 946
T +CFAVGE+LL+IG+GVESGHL WSRPR +CL+++ GLF AG+F L TVF ASGLY
Sbjct: 136 TTWICFAVGEILLLIGLGVESGHLKNWSRPRPNCLIIKEGLFSVAGIFALLTVFFASGLY 195
Query: 947 LTALRALRLSQEEEIVRREVL 1009
LTALRA R+SQE E RRE+L
Sbjct: 196 LTALRAQRMSQEHENTRREIL 216
Score = 82.4 bits (202), Expect(2) = 6e-17
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +1
Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
Q TWV S ++ + +C+Y+GSG+TP LCSA AF+ LA+ MV+ H Y+L+AVSKAPP A
Sbjct: 53 QVTWVNSDSKEIDDDSQCIYTGSGRTPFLCSAIAFVVLAVAMVVEHMYMLIAVSKAPPQA 112
Query: 562 LIAWNPDDSRQANSLTWHA 618
L+AW+ +S A S+T A
Sbjct: 113 LVAWDA-NSACAKSITRQA 130
Score = 32.0 bits (71), Expect(2) = 6e-17
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 203 VTHADLAPGRRTSDLGSKWGAFLM 274
VTHAD+AP ++DLGS AFL+
Sbjct: 7 VTHADIAPSPGSTDLGSNTAAFLV 30
>ref|XP_003594810.1| hypothetical protein MTR_2g034880 [Medicago truncatula]
gi|355483858|gb|AES65061.1| hypothetical protein
MTR_2g034880 [Medicago truncatula]
Length = 264
Score = 115 bits (288), Expect = 2e-23
Identities = 66/143 (46%), Positives = 94/143 (65%), Gaps = 9/143 (6%)
Frame = +2
Query: 608 HGTLPCMCASS-FV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLSTCR--- 775
+G +P +CA+S FV + + L+++H I+ I+ + + P+ K+L+
Sbjct: 71 NGKVPLLCAASAFV--GLAIALVMEHTYMLIAVSKSSPSLINWDPDSPSAKSLTWLAGFF 128
Query: 776 -----VCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASG 940
+CFAV E+LL+ G+ VESGHL W++PR +C +R GLF +AGVF LTTVFLA+G
Sbjct: 129 FIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLFSAAGVFALTTVFLAAG 188
Query: 941 LYLTALRALRLSQEEEIVRREVL 1009
LYLTALRA R+S+E IVRREVL
Sbjct: 189 LYLTALRAQRMSEELAIVRREVL 211
Score = 82.0 bits (201), Expect(2) = 2e-18
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = +1
Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
+ TW+ ++ + G + EC+Y+ +GK PLLC+A AF+ LAI +VM H+Y+L+AVSK+ P+
Sbjct: 49 EVTWMNTNGKEKGTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKS-SPS 107
Query: 562 LIAWNPDDSRQANSLTWHA 618
LI W+P DS A SLTW A
Sbjct: 108 LINWDP-DSPSAKSLTWLA 125
Score = 37.4 bits (85), Expect(2) = 2e-18
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +2
Query: 197 MPVTHADLAPGRRTSDLGSKWGAFLM 274
M VTHADL P R +DL SK GAFLM
Sbjct: 1 MAVTHADLEPKRSKTDLSSKTGAFLM 26