BLASTX nr result

ID: Coptis24_contig00011334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011334
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594811.1| hypothetical protein MTR_2g034890 [Medicago ...   100   8e-39
ref|XP_003550549.1| PREDICTED: uncharacterized protein LOC100804...   121   3e-25
ref|XP_002519182.1| conserved hypothetical protein [Ricinus comm...   112   4e-25
ref|XP_002311404.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_003594810.1| hypothetical protein MTR_2g034880 [Medicago ...   115   2e-23

>ref|XP_003594811.1| hypothetical protein MTR_2g034890 [Medicago truncatula]
            gi|355483859|gb|AES65062.1| hypothetical protein
            MTR_2g034890 [Medicago truncatula]
          Length = 243

 Score =  100 bits (249), Expect(3) = 8e-39
 Identities = 48/81 (59%), Positives = 61/81 (75%)
 Frame = +2

Query: 767  TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGLY 946
            T  +CFAV E+LL+ G+ VESGHL  W++PR +C  +R GLF +AGVF LTTVF+A+GLY
Sbjct: 130  TTWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYAIREGLFSAAGVFALTTVFIAAGLY 189

Query: 947  LTALRALRLSQEEEIVRREVL 1009
            LT LRA R+S+    V REVL
Sbjct: 190  LTILRAQRMSEVVATVGREVL 210



 Score = 80.9 bits (198), Expect(3) = 8e-39
 Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
 Frame = +1

Query: 382 QATWVLSST-EGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPP 558
           Q TW+++   +  G++YEC Y+G+GK PLLCSA AF+ LAI +VM H Y+L+AVSK+ PP
Sbjct: 47  QVTWIMNKDGKDKGDKYECAYNGNGKVPLLCSACAFVGLAIALVMEHIYMLIAVSKS-PP 105

Query: 559 ALIAWNPDDSRQANSLTWHAALHVRLKLC 645
           +L+ W+ D S   + ++     ++   +C
Sbjct: 106 SLLDWDNDSSSVKSLISLAGFFYITTWIC 134



 Score = 26.9 bits (58), Expect(3) = 8e-39
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 197 MPVTHADLAPGRRTSDLGSKWGAFLM 274
           M VTHADL P  +T DL SK   FL+
Sbjct: 1   MAVTHADLEPKSKT-DLSSKTVVFLV 25


>ref|XP_003550549.1| PREDICTED: uncharacterized protein LOC100804457 [Glycine max]
          Length = 277

 Score =  121 bits (303), Expect = 3e-25
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 9/144 (6%)
 Frame = +2

Query: 611  GTLPCMCAS-SFV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLS------- 766
            G +P +CAS +F+   + + +LV+H    ++        ++ + +  + K+L+       
Sbjct: 96   GKMPLLCASCAFI--GLAIAMLVEHTFLLMAVSNSSPALLTLDPDSASAKSLTWQSGFFF 153

Query: 767  -TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGL 943
             T  +CFAVGE+LL+ GV VESGHL  WS+P+ SCL +R GLF +AGVF L TVFLAS L
Sbjct: 154  VTTWICFAVGEILLLAGVSVESGHLKNWSKPKPSCLSIREGLFCAAGVFALATVFLASAL 213

Query: 944  YLTALRALRLSQEEEIVRREVLNT 1015
            YLTALRALR+SQE+E VRREVL T
Sbjct: 214  YLTALRALRISQEQENVRREVLMT 237



 Score = 76.3 bits (186), Expect(2) = 1e-16
 Identities = 37/76 (48%), Positives = 55/76 (72%)
 Frame = +1

Query: 391 WVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPALIA 570
           W+ ++  G G + EC+YSGSGK PLLC++ AF+ LAI M++ H+++L+AVS +  PAL+ 
Sbjct: 76  WMSTAEHGKGSKSECVYSGSGKMPLLCASCAFIGLAIAMLVEHTFLLMAVSNS-SPALLT 134

Query: 571 WNPDDSRQANSLTWHA 618
            +P DS  A SLTW +
Sbjct: 135 LDP-DSASAKSLTWQS 149



 Score = 37.0 bits (84), Expect(2) = 1e-16
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = +2

Query: 194 KMPVTHADLAPGRRTSDLGSKWGAFLM 274
           KM VTHADL P RR +D  SK GAF +
Sbjct: 24  KMAVTHADLEPRRRKTDFSSKTGAFFV 50


>ref|XP_002519182.1| conserved hypothetical protein [Ricinus communis]
           gi|223541497|gb|EEF43046.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score =  100 bits (248), Expect(2) = 4e-25
 Identities = 45/79 (56%), Positives = 60/79 (75%)
 Frame = +1

Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
           + TWV S+ EG  E +EC+YSGSGKTPLLC+A AF+ LAIGMV+ H Y+L+A+SK+PP  
Sbjct: 51  RVTWVASNGEGSAENHECIYSGSGKTPLLCAAVAFVGLAIGMVVEHMYILIAISKSPPSV 110

Query: 562 LIAWNPDDSRQANSLTWHA 618
           LI W+  +S  A ++TW A
Sbjct: 111 LITWD-SNSPPAKTITWQA 128



 Score = 41.6 bits (96), Expect(2) = 4e-25
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 200 PVTHADLAPGRRTSDLGSKWGAFL 271
           P+THADLAPG R++DLGSK  AFL
Sbjct: 4   PITHADLAPGPRSTDLGSKTAAFL 27



 Score =  112 bits (281), Expect = 1e-22
 Identities = 67/142 (47%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
 Frame = +2

Query: 611  GTLPCMCAS-SFV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLS------- 766
            G  P +CA+ +FV   I + +   +   +IS  P  S  I+ + N P  KT++       
Sbjct: 74   GKTPLLCAAVAFVGLAIGMVVEHMYILIAISKSP-PSVLITWDSNSPPAKTITWQAGFFF 132

Query: 767  -TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGL 943
                VCFAVGE+LL+IG+ VESGHL  WSRP+ SCLV++ GLF +AGV  L TVFLA+GL
Sbjct: 133  VATWVCFAVGEILLLIGLSVESGHLKNWSRPKSSCLVIKQGLFSAAGVLSLATVFLAAGL 192

Query: 944  YLTALRALRLSQEEEIVRREVL 1009
            Y+ ALRA R+SQE E +R+++L
Sbjct: 193  YVIALRAQRISQEHENLRQQIL 214


>ref|XP_002311404.1| predicted protein [Populus trichocarpa] gi|222851224|gb|EEE88771.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  115 bits (289), Expect = 1e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%)
 Frame = +2

Query: 767  TCRVCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASGLY 946
            T  +CFAVGE+LL+IG+GVESGHL  WSRPR +CL+++ GLF  AG+F L TVF ASGLY
Sbjct: 136  TTWICFAVGEILLLIGLGVESGHLKNWSRPRPNCLIIKEGLFSVAGIFALLTVFFASGLY 195

Query: 947  LTALRALRLSQEEEIVRREVL 1009
            LTALRA R+SQE E  RRE+L
Sbjct: 196  LTALRAQRMSQEHENTRREIL 216



 Score = 82.4 bits (202), Expect(2) = 6e-17
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = +1

Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
           Q TWV S ++   +  +C+Y+GSG+TP LCSA AF+ LA+ MV+ H Y+L+AVSKAPP A
Sbjct: 53  QVTWVNSDSKEIDDDSQCIYTGSGRTPFLCSAIAFVVLAVAMVVEHMYMLIAVSKAPPQA 112

Query: 562 LIAWNPDDSRQANSLTWHA 618
           L+AW+  +S  A S+T  A
Sbjct: 113 LVAWDA-NSACAKSITRQA 130



 Score = 32.0 bits (71), Expect(2) = 6e-17
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 203 VTHADLAPGRRTSDLGSKWGAFLM 274
           VTHAD+AP   ++DLGS   AFL+
Sbjct: 7   VTHADIAPSPGSTDLGSNTAAFLV 30


>ref|XP_003594810.1| hypothetical protein MTR_2g034880 [Medicago truncatula]
            gi|355483858|gb|AES65061.1| hypothetical protein
            MTR_2g034880 [Medicago truncatula]
          Length = 264

 Score =  115 bits (288), Expect = 2e-23
 Identities = 66/143 (46%), Positives = 94/143 (65%), Gaps = 9/143 (6%)
 Frame = +2

Query: 608  HGTLPCMCASS-FV*CFIQLQLLVKHNSKSISSIPYKSCSISHNFNRPTNKTLSTCR--- 775
            +G +P +CA+S FV   + + L+++H    I+        I+ + + P+ K+L+      
Sbjct: 71   NGKVPLLCAASAFV--GLAIALVMEHTYMLIAVSKSSPSLINWDPDSPSAKSLTWLAGFF 128

Query: 776  -----VCFAVGEVLLMIGVGVESGHLIKWSRPRLSCLVVRPGLFLSAGVFGLTTVFLASG 940
                 +CFAV E+LL+ G+ VESGHL  W++PR +C  +R GLF +AGVF LTTVFLA+G
Sbjct: 129  FIATWICFAVAEILLLAGLSVESGHLKNWTKPRTNCYTIREGLFSAAGVFALTTVFLAAG 188

Query: 941  LYLTALRALRLSQEEEIVRREVL 1009
            LYLTALRA R+S+E  IVRREVL
Sbjct: 189  LYLTALRAQRMSEELAIVRREVL 211



 Score = 82.0 bits (201), Expect(2) = 2e-18
 Identities = 40/79 (50%), Positives = 58/79 (73%)
 Frame = +1

Query: 382 QATWVLSSTEGGGERYECLYSGSGKTPLLCSAGAFLSLAIGMVMGHSYVLVAVSKAPPPA 561
           + TW+ ++ +  G + EC+Y+ +GK PLLC+A AF+ LAI +VM H+Y+L+AVSK+  P+
Sbjct: 49  EVTWMNTNGKEKGTKSECVYNSNGKVPLLCAASAFVGLAIALVMEHTYMLIAVSKS-SPS 107

Query: 562 LIAWNPDDSRQANSLTWHA 618
           LI W+P DS  A SLTW A
Sbjct: 108 LINWDP-DSPSAKSLTWLA 125



 Score = 37.4 bits (85), Expect(2) = 2e-18
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = +2

Query: 197 MPVTHADLAPGRRTSDLGSKWGAFLM 274
           M VTHADL P R  +DL SK GAFLM
Sbjct: 1   MAVTHADLEPKRSKTDLSSKTGAFLM 26


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