BLASTX nr result

ID: Coptis24_contig00011331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011331
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283416.1| PREDICTED: uncharacterized protein LOC100242...   163   4e-38
ref|XP_002515396.1| conserved hypothetical protein [Ricinus comm...   150   4e-34
ref|XP_002324926.1| predicted protein [Populus trichocarpa] gi|2...   146   6e-33
gb|ABK93859.1| unknown [Populus trichocarpa]                          146   6e-33
ref|XP_002309691.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33

>ref|XP_002283416.1| PREDICTED: uncharacterized protein LOC100242247 [Vitis vinifera]
          Length = 183

 Score =  163 bits (413), Expect = 4e-38
 Identities = 96/166 (57%), Positives = 112/166 (67%), Gaps = 6/166 (3%)
 Frame = -1

Query: 645 TTFVQADTHTFRELVQKLTGADDNTQEKLPITLPXXXXXXXXXXXNDLVVGPRKSPFKLQ 466
           TTFVQAD  TFR+LVQKLTGA  ++ EKLP+TLP            D   GPR+SPFKLQ
Sbjct: 21  TTFVQADATTFRDLVQKLTGAAVDSPEKLPVTLPVRASARPNSV--DSSTGPRRSPFKLQ 78

Query: 465 ERRQNMRKLEIKLGLTSIRNSPY--SPRKMQQIPSPVTPLISDSVFTG----SGSLSPAS 304
           ERR  MRKLEIKLG+T++RNSP+  SPR +   PSPVTPL S+S+F+G    SG  SPAS
Sbjct: 79  ERRHTMRKLEIKLGITTLRNSPFPHSPRVVSPTPSPVTPLSSESMFSGRAGSSGGESPAS 138

Query: 303 GVEEEKAIAEKGFYLHPSPLSTPRGSXXXXXXXXXXXXXPKQQPRD 166
             EEE+AIAEKGFY  PSP+STPRGS             P Q+ RD
Sbjct: 139 --EEERAIAEKGFYFLPSPMSTPRGSELPELLTLFPLSSPSQRTRD 182


>ref|XP_002515396.1| conserved hypothetical protein [Ricinus communis]
           gi|223545340|gb|EEF46845.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  150 bits (378), Expect = 4e-34
 Identities = 89/146 (60%), Positives = 103/146 (70%), Gaps = 6/146 (4%)
 Frame = -1

Query: 648 PTTFVQADTHTFRELVQKLTGADDNTQEKLPITLPXXXXXXXXXXXNDLVVGPRKSPFKL 469
           PTTFVQAD +TFR+LVQKLTG+  N+ EKLPITLP           +    GPR+SPFKL
Sbjct: 15  PTTFVQADANTFRDLVQKLTGSTGNSSEKLPITLPTRLSSKLSHPVD--TTGPRRSPFKL 72

Query: 468 QERRQNMRKLEIKLGLTSIRNSPYSPRKMQQIPSPVTPLISDSVFTGS----GSLSPASG 301
           QERR  +RKLEIKLGLTS  + P+  R    IPSPVTPL S+S+F  S     S SP+S 
Sbjct: 73  QERRHTIRKLEIKLGLTS-SHKPH--RVSSTIPSPVTPLSSESLFFRSPGTDQSSSPSSP 129

Query: 300 V--EEEKAIAEKGFYLHPSPLSTPRG 229
              EE+KAIAEKGFYLHPSPL+TPRG
Sbjct: 130 AVSEEDKAIAEKGFYLHPSPLTTPRG 155


>ref|XP_002324926.1| predicted protein [Populus trichocarpa] gi|222866360|gb|EEF03491.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  146 bits (368), Expect = 6e-33
 Identities = 85/145 (58%), Positives = 101/145 (69%), Gaps = 4/145 (2%)
 Frame = -1

Query: 648 PTTFVQADTHTFRELVQKLTGADDNTQEKLPITLPXXXXXXXXXXXNDLVVGPRKSPFKL 469
           PTTFVQADT++FR+LVQKLTG   +TQ+ LP T             +    GPR+SPFKL
Sbjct: 10  PTTFVQADTNSFRDLVQKLTGLASDTQQ-LPATRILSSSKSFHSPVD--FTGPRRSPFKL 66

Query: 468 QERRQNMRKLEIKLGLTSIRNSPYSPRKMQQIPSPVTPLISDSVFTGS----GSLSPASG 301
           QERR   RKLEIKLGLTS+ NS    R+ +Q+ SPVTPL S+ +F  S     S SP + 
Sbjct: 67  QERRHTSRKLEIKLGLTSLSNSSSPTRQTRQVESPVTPLSSEFLFFPSPATTESPSPPAV 126

Query: 300 VEEEKAIAEKGFYLHPSPLSTPRGS 226
           +EEEKAIAEKGFYLHPSPL+TPRGS
Sbjct: 127 LEEEKAIAEKGFYLHPSPLNTPRGS 151


>gb|ABK93859.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  146 bits (368), Expect = 6e-33
 Identities = 85/145 (58%), Positives = 101/145 (69%), Gaps = 4/145 (2%)
 Frame = -1

Query: 648 PTTFVQADTHTFRELVQKLTGADDNTQEKLPITLPXXXXXXXXXXXNDLVVGPRKSPFKL 469
           PTTFVQADT++FR+LVQKLTG   +TQ+ LP T             +    GPR+SPFKL
Sbjct: 21  PTTFVQADTNSFRDLVQKLTGLASDTQQ-LPATRILSSSKSFHSPVD--FTGPRRSPFKL 77

Query: 468 QERRQNMRKLEIKLGLTSIRNSPYSPRKMQQIPSPVTPLISDSVFTGS----GSLSPASG 301
           QERR   RKLEIKLGLTS+ NS    R+ +Q+ SPVTPL S+ +F  S     S SP + 
Sbjct: 78  QERRHTSRKLEIKLGLTSLSNSSSPTRQTRQVESPVTPLSSEFLFFPSPATTESPSPPAV 137

Query: 300 VEEEKAIAEKGFYLHPSPLSTPRGS 226
           +EEEKAIAEKGFYLHPSPL+TPRGS
Sbjct: 138 LEEEKAIAEKGFYLHPSPLNTPRGS 162


>ref|XP_002309691.1| predicted protein [Populus trichocarpa] gi|222855667|gb|EEE93214.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  145 bits (367), Expect = 8e-33
 Identities = 86/145 (59%), Positives = 104/145 (71%), Gaps = 4/145 (2%)
 Frame = -1

Query: 648 PTTFVQADTHTFRELVQKLTGADDNTQEKLPITLPXXXXXXXXXXXNDLVVGPRKSPFKL 469
           PTTFVQAD +TFR+LVQKLTG   +TQ +LP+T             +  + GPR+SPFKL
Sbjct: 17  PTTFVQADINTFRDLVQKLTGLASDTQ-RLPVTRALSSAKPSRNPVD--LTGPRRSPFKL 73

Query: 468 QERRQNMRKLEIKLGLTSIRNSPYSP-RKMQQIPSPVTPLISDSVFTGS-GSLSPASG-- 301
           QERR  +RKLEIKLGLTS+ NS  SP R+  ++ SPVTPL S  +F  S G+ SP+S   
Sbjct: 74  QERRHTLRKLEIKLGLTSLSNSSSSPTRQTHRLDSPVTPLCSGFLFFPSPGTESPSSPAV 133

Query: 300 VEEEKAIAEKGFYLHPSPLSTPRGS 226
           +EEEKAIAEKGFY HPSPL+TPRGS
Sbjct: 134 LEEEKAIAEKGFYFHPSPLNTPRGS 158


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