BLASTX nr result

ID: Coptis24_contig00011315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011315
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase,...   102   5e-20
gb|AFK46976.1| unknown [Lotus japonicus]                              101   1e-19
gb|AEY80143.1| lipoic acid synthase [Jatropha curcas]                  97   4e-18
ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus co...    97   4e-18
ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase,...    95   1e-17

>ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain,
           chloroplastic [Vitis vinifera]
           gi|147820518|emb|CAN76575.1| hypothetical protein
           VITISV_024425 [Vitis vinifera]
          Length = 168

 Score =  102 bits (255), Expect = 5e-20
 Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
 Frame = -3

Query: 234 CEVALKADSPXXXXXXXXXS----------KIGARVRVKVPLKVYHVPKVPELDLSGMEG 85
           CEVAL++DS                     KIGARVRVKVPLKV+HVP+VPE+DL+GMEG
Sbjct: 58  CEVALRSDSATSSSSAAFEQVQEDAAEEAGKIGARVRVKVPLKVFHVPRVPEVDLTGMEG 117

Query: 84  ELKQYVGFWKGKHISANLPFKVQFFAQV 1
            LKQYVG WKGK ISANLPFK+ F A +
Sbjct: 118 VLKQYVGVWKGKRISANLPFKIGFVADI 145


>gb|AFK46976.1| unknown [Lotus japonicus]
          Length = 166

 Score =  101 bits (252), Expect = 1e-19
 Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
 Frame = -3

Query: 234 CEVALKADSPXXXXXXXXXS-----KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQY 70
           CEVA++  SP               K+GARVRVKVPLKVYHVPKVPE DL G EGE+KQY
Sbjct: 64  CEVAVEESSPSSTSSSSESEEAESSKVGARVRVKVPLKVYHVPKVPEFDLEGAEGEIKQY 123

Query: 69  VGFWKGKHISANLPFKVQFFAQV 1
           V  WKGK ISAN P+KVQF  ++
Sbjct: 124 VALWKGKKISANFPYKVQFVTEI 146


>gb|AEY80143.1| lipoic acid synthase [Jatropha curcas]
          Length = 201

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -3

Query: 174 KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQF 13
           KIGARVRVKVPLKVYHVP+VPE+DL+G EG LKQYV  WKGK ISANLP+KV+F
Sbjct: 123 KIGARVRVKVPLKVYHVPRVPEVDLTGKEGNLKQYVALWKGKRISANLPYKVEF 176


>ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus communis]
           gi|223548171|gb|EEF49663.1| lipoic acid synthetase,
           putative [Ricinus communis]
          Length = 184

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 43/58 (74%), Positives = 50/58 (86%)
 Frame = -3

Query: 174 KIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQFFAQV 1
           KIGARV+VKVPLKVYHVP+VPE+DL+G EG LKQYV  WKGK ISANLP+KV+F   +
Sbjct: 106 KIGARVKVKVPLKVYHVPRVPEVDLTGKEGHLKQYVALWKGKRISANLPYKVEFLVDI 163


>ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like
           [Glycine max]
          Length = 145

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 48/78 (61%), Positives = 56/78 (71%)
 Frame = -3

Query: 234 CEVALKADSPXXXXXXXXXSKIGARVRVKVPLKVYHVPKVPELDLSGMEGELKQYVGFWK 55
           CEVA+ A            SKIGARV+VK  +KVYHVPKV ELDL+G+EGE+KQYVG W 
Sbjct: 51  CEVAINA---VDESTTSPESKIGARVKVKAGVKVYHVPKVAELDLTGLEGEIKQYVGLWN 107

Query: 54  GKHISANLPFKVQFFAQV 1
           GK ISANLP+KVQF   +
Sbjct: 108 GKRISANLPYKVQFLTDI 125


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