BLASTX nr result

ID: Coptis24_contig00011312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011312
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...   265   3e-68
ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203...   231   4e-58
ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|1...   226   1e-56
ref|XP_002518417.1| conserved hypothetical protein [Ricinus comm...   224   5e-56
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]   223   8e-56

>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score =  265 bits (676), Expect = 3e-68
 Identities = 165/317 (52%), Positives = 193/317 (60%), Gaps = 28/317 (8%)
 Frame = -2

Query: 975 PEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLISQDP---KP----NSVXXXXXXXX 817
           PEFEFWMVRNPS PQP+LLSADEL  DGVLLPLHL+  +P   KP    NS         
Sbjct: 28  PEFEFWMVRNPSFPQPNLLSADELFVDGVLLPLHLLRHNPDSSKPVQELNSEAPDSEPPI 87

Query: 816 XXXPSRPGP------EAESSSTSKRWRDIFKIG-XXXXXXXXXXXXXXXXXXXXXXXXXX 658
                 PGP       A +S+ SKRW+DIFK G                           
Sbjct: 88  PDTEPEPGPGPEISSAAPASTASKRWKDIFKKGEKKSAKNGEDKEKEKEKKKERKSGSGA 147

Query: 657 SAAELNINIWPFSRSWSAGN---RPKL-SNGSVSRKVSSAPCSRSNSAGESKSRKWPNSP 490
           S+AELNINIWPFSRS SAGN   RP++ + G+ +RKVSSAPCSRSNSAGESKSRKWP+SP
Sbjct: 148 SSAELNINIWPFSRSRSAGNNAVRPRMAAGGAGTRKVSSAPCSRSNSAGESKSRKWPSSP 207

Query: 489 SRGGGIHLGRNSPVWQVRRGASGLRNTEPVVRNNVEKSGLRKGGLRSKNINNR----GGD 322
            R  G+HLGR+SPVWQVRRG S  ++ EP+VR N EK   ++G   S+N  NR       
Sbjct: 208 GR-PGVHLGRSSPVWQVRRGGSASKSLEPLVR-NAEKGSKKEG---SENRRNRTPAPAPP 262

Query: 321 VGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVXXXXXXGSENGVASITTG------GAV 160
            G  K RVLNLNVPMCIGYR  LSCR++EN  +      GS  G A  + G      G V
Sbjct: 263 AGIPKARVLNLNVPMCIGYRHHLSCRSDENSTIGTSHTIGSRGGGAGASMGNGGGGSGNV 322

Query: 159 GANSKLFNLRTLFTKKI 109
           G+ S LFNLR+LFTKK+
Sbjct: 323 GSASNLFNLRSLFTKKV 339


>ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203369 [Cucumis sativus]
           gi|449518021|ref|XP_004166042.1| PREDICTED:
           uncharacterized protein LOC101223271 [Cucumis sativus]
          Length = 332

 Score =  231 bits (588), Expect = 4e-58
 Identities = 148/320 (46%), Positives = 176/320 (55%), Gaps = 31/320 (9%)
 Frame = -2

Query: 975 PEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLISQDPKPNSVXXXXXXXXXXXPSRP 796
           PEFEFWMVRNPS PQ +LLSADEL  DGVLLPLHL+       S            PS P
Sbjct: 17  PEFEFWMVRNPSFPQTNLLSADELFVDGVLLPLHLLPNHSPSPSTDPNQKPHLEPPPSEP 76

Query: 795 GP---------EAESSSTSKRWRDIFKIGXXXXXXXXXXXXXXXXXXXXXXXXXXSAAEL 643
            P           +S S+SKRW  IFK                            ++AEL
Sbjct: 77  DPSDGPKLTPNSTDSGSSSKRW-SIFKKSEKKNTSGNQEDRDKEKKKEKKTTNGSTSAEL 135

Query: 642 NINIWPFSRSWSAGN---RPKLSNGSV--SRKVSSAPCSRSNSAGESKSRKWPNSPSRGG 478
           NINIWPFSRS SAGN   RPKL  G+   SRKV+SAPCSRSNSAGESKSRKWP+SPSR G
Sbjct: 136 NINIWPFSRSRSAGNAFTRPKLFPGAQPGSRKVNSAPCSRSNSAGESKSRKWPSSPSR-G 194

Query: 477 GIHLGRNSPVWQVRRGASGLRNTEPVVRNNVEKSGLRKGGLRSKNINNRGGDVGASKGRV 298
           G+HLGR+SPVWQVRRG S  +  E   RN  + +      +             AS+ RV
Sbjct: 195 GVHLGRSSPVWQVRRGGSVPKTPETFSRNADKPARKEPSEVHRSKAATAAASSSASRVRV 254

Query: 297 LNLNVPMCIGYRQQLSCRTNENVLVXXXXXXGSENGVASITTGGAVG------------- 157
           LNLNVPMCIGYR  LSCR++E   +      GS  G +S  +GG+ G             
Sbjct: 255 LNLNVPMCIGYRNHLSCRSDETSAL---GVIGSGGGGSSSNSGGSHGYDNNGDGSAVSNP 311

Query: 156 ----ANSKLFNLRTLFTKKI 109
               + + LF++R+LFTKK+
Sbjct: 312 GNSSSTANLFSIRSLFTKKV 331


>ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|118484607|gb|ABK94177.1|
            unknown [Populus trichocarpa] gi|222873786|gb|EEF10917.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  226 bits (575), Expect = 1e-56
 Identities = 152/329 (46%), Positives = 191/329 (58%), Gaps = 40/329 (12%)
 Frame = -2

Query: 975  PEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLISQ----------DPKPNSVXXXXX 826
            PEFEFWMVRNPS PQP+L+SADEL  DGVLLPLHL+ Q          DP P+S      
Sbjct: 35   PEFEFWMVRNPSFPQPNLVSADELFVDGVLLPLHLLHQPNNNTNNSHPDPDPDSPEPEPP 94

Query: 825  XXXXXXPSRPGPEA-------ESSSTSKRWRD-IFKIGXXXXXXXXXXXXXXXXXXXXXX 670
                     PGPE        E +S+SKRW+D IFK G                      
Sbjct: 95   NAQPD----PGPEISPASITIEPTSSSKRWKDMIFKKGDKKTSTAAKKQEEKDKDRDRDK 150

Query: 669  XXXXSA------AELNI-NIWPFSRSWSAGN---RPKLSNGSV-SRKVSSAPCSRSNSAG 523
                 +      AELNI NIWPFSRS SAGN   RPKL  G+  +RKVSSAPCSRSNSAG
Sbjct: 151  KREKRSQSGASSAELNIINIWPFSRSRSAGNSVTRPKLFPGAPGTRKVSSAPCSRSNSAG 210

Query: 522  ESKSRK-WPNSPSRGGGIHLGRNSPVWQVRR-GASGLRNT--EPVVRNNVEKSGLRKGGL 355
            ESKSRK WP+SPSR  G+H+GR+SPVWQ RR G+SG++++  E VVR+  + S  ++   
Sbjct: 211  ESKSRKSWPSSPSR-PGVHVGRSSPVWQARRGGSSGMKSSFPEAVVRSGEKLSSKKEVTE 269

Query: 354  RSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVXXXXXXGSENGVASIT 175
              +  N   G+ G+++ +VLN+NVP+CIGYR  LSCR++EN  +      G +N     T
Sbjct: 270  PGRGKNIASGN-GSTRAKVLNINVPVCIGYRNHLSCRSDENSAIGARGSGGGKNVAGGST 328

Query: 174  TGGA-------VGANSKLFNLRTLFTKKI 109
             G +       VG    LFN R+LF+KK+
Sbjct: 329  DGSSATNSTINVGNGGNLFNFRSLFSKKV 357


>ref|XP_002518417.1| conserved hypothetical protein [Ricinus communis]
            gi|223542262|gb|EEF43804.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score =  224 bits (570), Expect = 5e-56
 Identities = 152/339 (44%), Positives = 183/339 (53%), Gaps = 50/339 (14%)
 Frame = -2

Query: 975  PEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLI-----SQDPKPNSVXXXXXXXXXX 811
            PEFEFW V NPS P+P++LSADEL  DGVLLPLHL+     + DP P             
Sbjct: 31   PEFEFWRVPNPSFPEPNILSADELFVDGVLLPLHLLHLHNHNHDPGPQP----DPEPPNS 86

Query: 810  XPSRPGPE-------AESSST----SKRWRDIFKIGXXXXXXXXXXXXXXXXXXXXXXXX 664
               +PGP+       AES  T    SKRW+DIFK G                        
Sbjct: 87   QSEKPGPQISHKSIAAESVGTPLTASKRWKDIFKKGENKATSSKNQRDKDNDREKKKEKK 146

Query: 663  XXS-----AAELNINIWPFSRSWSAGN---RPKLSNGSVSRKVSSAPCSRSNSAGESKSR 508
              S     +AELNINIWPFSRS SAGN   RP +  G+ +RKVSSAPCSRSNSAGESKSR
Sbjct: 147  NQSGATSSSAELNINIWPFSRSRSAGNSGARPTMFPGT-TRKVSSAPCSRSNSAGESKSR 205

Query: 507  KWPNSPSRGGGIHLGRNSPVWQVRRGASGLR----NTEPVVRNNVEKSGLRK-----GGL 355
            KWP+SP R    HLGR+SPVWQ RRG+ G R    NTE  V  + EK   +K     GG 
Sbjct: 206  KWPSSPGRA---HLGRSSPVWQARRGSGGSRTKTSNTEAPVSRSSEKMASKKKVSVSGGE 262

Query: 354  RSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLSCRTNEN-----------------VL 226
              +N    G +   SK +V+NLNVPMC+ YRQ LSCR++EN                   
Sbjct: 263  HRRNKTTIGDN---SKRKVVNLNVPMCMAYRQHLSCRSDENSATGISNTTSTSITITATA 319

Query: 225  VXXXXXXGSENGVASITTGGAVGANSKLFNLRTLFTKKI 109
            +       S N ++S  +  A G  + LFNLR+LFTKK+
Sbjct: 320  IAEATIVDSSNSISSTASNLATGGGN-LFNLRSLFTKKV 357


>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score =  223 bits (568), Expect = 8e-56
 Identities = 145/335 (43%), Positives = 180/335 (53%), Gaps = 47/335 (14%)
 Frame = -2

Query: 975 PEFEFWMVRNPSCPQPHLLSADELIADGVLLPLHLI----SQDPKPNSVXXXXXXXXXXX 808
           PEFEFWM+RNPS PQP+L +AD+L  +GV+LPLHL+      DP P +            
Sbjct: 22  PEFEFWMLRNPSFPQPNLHTADQLFVNGVILPLHLLPTTSKTDPPPQT--PTSNPSSHNP 79

Query: 807 PSRPGPEAESS------------------STSKRWRDIFKIGXXXXXXXXXXXXXXXXXX 682
            S P PE +SS                  S SKRW+DIF+ G                  
Sbjct: 80  VSEPDPEPDSSHPESSPVITESSSSASTFSGSKRWKDIFRKGEKNNTEDKEKEKEKEKEK 139

Query: 681 XXXXXXXXS--------AAELNINIWPFSRSWSAGN---RPKLSNGS-VSRKVSSAPCSR 538
                            AAELNINIWPFSRS SAGN   RPK   G+ V+RKV+SAPCSR
Sbjct: 140 KNKDKKKERKNGNGANSAAELNINIWPFSRSRSAGNTTTRPKFFTGAPVTRKVNSAPCSR 199

Query: 537 SNSAGESKSRKWPNSPSRGGGIHLGRNSPVWQVRRGASGLRNTEPVVRNNVEKSGLRKGG 358
           SNSAGESKSRKWP+SP R  G+H+GRNSPVWQVRRG     + +    +N +K   ++  
Sbjct: 200 SNSAGESKSRKWPSSPGR-AGVHVGRNSPVWQVRRGGGKNSDQQTQQGSNTDKELKKEAT 258

Query: 357 L--RSKNINNRGGDVGASKGRVLNLNVPMCIGYRQQLSCRTNENVLVXXXXXXGSENGVA 184
           +  RSK ++  GG     K +VL+LNVPMCIGYR  LSCR++EN  +         +G  
Sbjct: 259 VSRRSKVVSGGGG-----KAKVLSLNVPMCIGYRHHLSCRSDENSAI-------GVSGGV 306

Query: 183 SITTGGA-----------VGANSKLFNLRTLFTKK 112
           ++  GG             G+   LFNLR LFTKK
Sbjct: 307 AVNRGGGDGGGGECHHHDEGSGGNLFNLRNLFTKK 341


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