BLASTX nr result

ID: Coptis24_contig00011304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011304
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|2...   101   3e-19
gb|AAM13159.1| unknown protein [Arabidopsis thaliana] gi|2508383...    96   1e-17
gb|AAG50957.1|AC073943_7 hypothetical protein [Arabidopsis thali...    96   1e-17
ref|NP_176117.1| kinase interacting family protein [Arabidopsis ...    96   1e-17
ref|XP_004142077.1| PREDICTED: uncharacterized protein LOC101215...    96   2e-17

>ref|XP_002327850.1| predicted protein [Populus trichocarpa] gi|222837259|gb|EEE75638.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  101 bits (252), Expect = 3e-19
 Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
 Frame = -3

Query: 606 NSETREKTSLTSSPCMSSAKELEHLSKTFNAIFSSKRKRTEKSSFPQSSLMATTSTSRMG 427
           +SE +++   +SS   +S      L+K      S    RT  ++ P SSL          
Sbjct: 24  SSEAKKRKGFSSSTTPAS------LTKILIRSLSRLNPRTPSNTVPLSSL---------- 67

Query: 426 YKNSEKNVYLLEWWLLKAETDFNGKILAVGGFTYCGENEGTQIFSSKPIVKRTDTWTLQA 247
              S  +V+L +WWL+K E    G  LAV GFT   E  GT++F S  IVKR  T  L+A
Sbjct: 68  ---SLNSVWLHDWWLVKVE----GNGLAVSGFT-SREGVGTRLFCSAAIVKRHYTTILEA 119

Query: 246 ADDMTIYITGSINKTRSSENGFSFEVCNRFDIGFPYDWQNFS------NSEKESSDRGNG 85
            D +T+ ++G IN+ R+ ENGFSF++C+RF +GFPY W+  +       S    S RG  
Sbjct: 120 KDGITVTLSGFINRDRAHENGFSFQICDRFQLGFPYSWEEIAAKLRGEESANGGSPRGKS 179

Query: 84  EIGGAESSAPISVKESS 34
            +     S+ IS   +S
Sbjct: 180 GLVELNMSSGISTNTAS 196



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -1

Query: 1067 AVVLKEWWLVKSGNELNGQRLAIGGIESVGGA-TRSFRSAPIVKRYSMYEVESADGIPVF 891
            +V L +WWLVK    + G  LA+ G  S  G  TR F SA IVKR+    +E+ DGI V 
Sbjct: 71   SVWLHDWWLVK----VEGNGLAVSGFTSREGVGTRLFCSAAIVKRHYTTILEAKDGITVT 126

Query: 890  INGYINRPRTEENGVSLE 837
            ++G+INR R  ENG S +
Sbjct: 127  LSGFINRDRAHENGFSFQ 144


>gb|AAM13159.1| unknown protein [Arabidopsis thaliana] gi|25083835|gb|AAN72124.1|
           unknown protein [Arabidopsis thaliana]
          Length = 281

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 49/106 (46%), Positives = 68/106 (64%)
 Frame = -3

Query: 411 KNVYLLEWWLLKAETDFNGKILAVGGFTYCGENEGTQIFSSKPIVKRTDTWTLQAADDMT 232
           K+V L +WWL K      GK L + GF   G + G ++FSS  I KR ++ TL+A D +T
Sbjct: 64  KSVTLSDWWLTK-----KGKDLCIKGFESNGAS-GVRLFSSGTISKRHESTTLEAIDGIT 117

Query: 231 IYITGSINKTRSSENGFSFEVCNRFDIGFPYDWQNFSNSEKESSDR 94
           I I G IN++R  ENG S EVCNRF +GFPYDW++++  E+E   +
Sbjct: 118 ISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEEEEEKKKK 163



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 1109 LAMATPKKQSSFKKAVVLKEWWLVKSGNELNGQRLAIGGIESVGGA-TRSFRSAPIVKRY 933
            LA+ TP K     K+V L +WWL K G +L      I G ES G +  R F S  I KR+
Sbjct: 54   LAVITPIKTL---KSVTLSDWWLTKKGKDL-----CIKGFESNGASGVRLFSSGTISKRH 105

Query: 932  SMYEVESADGIPVFINGYINRPRTEENGVSLE 837
                +E+ DGI + ING+INR R  ENG+S+E
Sbjct: 106  ESTTLEAIDGITISINGFINRSRCLENGISIE 137


>gb|AAG50957.1|AC073943_7 hypothetical protein [Arabidopsis thaliana]
          Length = 1195

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 49/106 (46%), Positives = 68/106 (64%)
 Frame = -3

Query: 411 KNVYLLEWWLLKAETDFNGKILAVGGFTYCGENEGTQIFSSKPIVKRTDTWTLQAADDMT 232
           K+V L +WWL K      GK L + GF   G + G ++FSS  I KR ++ TL+A D +T
Sbjct: 64  KSVTLSDWWLTK-----KGKDLCIKGFESNGAS-GVRLFSSGTISKRHESTTLEAIDGIT 117

Query: 231 IYITGSINKTRSSENGFSFEVCNRFDIGFPYDWQNFSNSEKESSDR 94
           I I G IN++R  ENG S EVCNRF +GFPYDW++++  E+E   +
Sbjct: 118 ISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEEEEEKKKK 163



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 1109 LAMATPKKQSSFKKAVVLKEWWLVKSGNELNGQRLAIGGIESVGGA-TRSFRSAPIVKRY 933
            LA+ TP K     K+V L +WWL K G +L      I G ES G +  R F S  I KR+
Sbjct: 54   LAVITPIKTL---KSVTLSDWWLTKKGKDL-----CIKGFESNGASGVRLFSSGTISKRH 105

Query: 932  SMYEVESADGIPVFINGYINRPRTEENGVSLE 837
                +E+ DGI + ING+INR R  ENG+S+E
Sbjct: 106  ESTTLEAIDGITISINGFINRSRCLENGISIE 137


>ref|NP_176117.1| kinase interacting family protein [Arabidopsis thaliana]
           gi|12321382|gb|AAG50760.1|AC079131_5 hypothetical
           protein [Arabidopsis thaliana]
           gi|332195393|gb|AEE33514.1| kinase interacting family
           protein [Arabidopsis thaliana]
          Length = 1246

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 49/106 (46%), Positives = 68/106 (64%)
 Frame = -3

Query: 411 KNVYLLEWWLLKAETDFNGKILAVGGFTYCGENEGTQIFSSKPIVKRTDTWTLQAADDMT 232
           K+V L +WWL K      GK L + GF   G + G ++FSS  I KR ++ TL+A D +T
Sbjct: 64  KSVTLSDWWLTK-----KGKDLCIKGFESNGAS-GVRLFSSGTISKRHESTTLEAIDGIT 117

Query: 231 IYITGSINKTRSSENGFSFEVCNRFDIGFPYDWQNFSNSEKESSDR 94
           I I G IN++R  ENG S EVCNRF +GFPYDW++++  E+E   +
Sbjct: 118 ISINGFINRSRCLENGISIEVCNRFRLGFPYDWEDYNEEEEEKKKK 163



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 1109 LAMATPKKQSSFKKAVVLKEWWLVKSGNELNGQRLAIGGIESVGGA-TRSFRSAPIVKRY 933
            LA+ TP K     K+V L +WWL K G +L      I G ES G +  R F S  I KR+
Sbjct: 54   LAVITPIKTL---KSVTLSDWWLTKKGKDL-----CIKGFESNGASGVRLFSSGTISKRH 105

Query: 932  SMYEVESADGIPVFINGYINRPRTEENGVSLE 837
                +E+ DGI + ING+INR R  ENG+S+E
Sbjct: 106  ESTTLEAIDGITISINGFINRSRCLENGISIE 137


>ref|XP_004142077.1| PREDICTED: uncharacterized protein LOC101215836 [Cucumis sativus]
          Length = 295

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = -3

Query: 414 EKNVYLLEWWLLKAETDFNGKILAVGGFTYCGENEGTQIFSSKPIVKRTDTWTLQAADDM 235
           ++ V LL+WWL+ A  D NGK LAV G T     +  ++FSS PIVKR D +TL+ AD +
Sbjct: 24  QRTVRLLDWWLITAGNDSNGKTLAVAGLT-SKPGQPVRVFSSAPIVKRHDVFTLETADGI 82

Query: 234 TIYITGSINKTRSSENGFSFEVCNRFDIGFPYDWQ-NFSNSEKESSDRGNGEIGGAESSA 58
            + + G +NK R+++NGF+ +V   F  GFP +W+ + +N  +  +       G A  + 
Sbjct: 83  CVVLKGFLNKLRATDNGFTPQVFKHFVFGFPPNWETHAANCFEAGASNSTAAGGNASDTD 142

Query: 57  PISVKESSDRGNG 19
            +S +  S  GNG
Sbjct: 143 NLSCRSRSVTGNG 155



 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -1

Query: 1082 SSFKKAVVLKEWWLVKSGNELNGQRLAIGGIESVGGA-TRSFRSAPIVKRYSMYEVESAD 906
            S F++ V L +WWL+ +GN+ NG+ LA+ G+ S  G   R F SAPIVKR+ ++ +E+AD
Sbjct: 21   SYFQRTVRLLDWWLITAGNDSNGKTLAVAGLTSKPGQPVRVFSSAPIVKRHDVFTLETAD 80

Query: 905  GIPVFINGYINRPRTEENG 849
            GI V + G++N+ R  +NG
Sbjct: 81   GICVVLKGFLNKLRATDNG 99


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