BLASTX nr result

ID: Coptis24_contig00011300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011300
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_003597708.1| hypothetical protein MTR_2g101430 [Medicago ...   147   7e-34
ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana] ...   135   4e-30
gb|AFK36403.1| unknown [Lotus japonicus]                              134   6e-30
ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arab...   133   2e-29

>ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|222851720|gb|EEE89267.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/109 (70%), Positives = 89/109 (81%), Gaps = 6/109 (5%)
 Frame = -1

Query: 434 LKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLSGDH-----GSSSSTRNE 270
           LKWVSKNLRA DFE WAKLAD+VL DPVYKDRLEWE A+  L+G++     GSSS +RN+
Sbjct: 63  LKWVSKNLRAGDFEHWAKLADQVLQDPVYKDRLEWELADTALNGNNNRSISGSSSLSRND 122

Query: 269 -STVEELVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPRRNFSKSG 126
            S V  L+E SERFGWDNEDK+GWSRV+F LLGTSKGG+IPRR+ S SG
Sbjct: 123 DSAVSRLLEISERFGWDNEDKVGWSRVNFELLGTSKGGKIPRRSSSSSG 171


>ref|XP_003597708.1| hypothetical protein MTR_2g101430 [Medicago truncatula]
           gi|355486756|gb|AES67959.1| hypothetical protein
           MTR_2g101430 [Medicago truncatula]
          Length = 273

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
 Frame = -1

Query: 434 LKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLSGDHGSSSSTRNESTVE- 258
           LKWVSKNLRAR+FEEWA LAD+VLLDP+YKDR+EWEFA N+L+G++ SS + ++    + 
Sbjct: 70  LKWVSKNLRAREFEEWAILADQVLLDPIYKDRIEWEFALNVLNGNNISSGAAKSIGAADS 129

Query: 257 ELVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPRR-NFSKS 129
           EL + SERFGWDN DK+GWS+VDF LLGTSKGGRIPR  NFS S
Sbjct: 130 ELQKISERFGWDNLDKVGWSKVDFDLLGTSKGGRIPRLVNFSDS 173


>ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12320781|gb|AAG50536.1|AC079828_7 hypothetical
           protein [Arabidopsis thaliana]
           gi|34146854|gb|AAQ62435.1| At1g51080 [Arabidopsis
           thaliana] gi|51969056|dbj|BAD43220.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194499|gb|AEE32620.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 285

 Score =  135 bits (339), Expect = 4e-30
 Identities = 70/106 (66%), Positives = 77/106 (72%), Gaps = 10/106 (9%)
 Frame = -1

Query: 434 LKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLSGDHGSSSSTR------- 276
           LKWVSKNLRA  FE WAKLADEVL D VYKDR EWEFAE +L   HGS  S R       
Sbjct: 86  LKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEWEFAEKIL---HGSDESMRALTSVRK 142

Query: 275 ---NESTVEELVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPR 147
                ++V  L+E SERFGWDNEDKIGWS+++F LLGTSKGGRIPR
Sbjct: 143 SREEVNSVSMLLEISERFGWDNEDKIGWSKINFELLGTSKGGRIPR 188


>gb|AFK36403.1| unknown [Lotus japonicus]
          Length = 281

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
 Frame = -1

Query: 434 LKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLSGDHGSS--SSTRNESTV 261
           LKWVSKNLRA D EEWAKLAD+VL DP+Y+DR+EWE A N+L+G+  SS   ++     V
Sbjct: 78  LKWVSKNLRAGDSEEWAKLADQVLGDPIYRDRIEWELALNVLNGNSSSSRQPTSIRGGAV 137

Query: 260 EELVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPR 147
            EL E SERFGWDN DKIGW ++DF LLGT KGGRIPR
Sbjct: 138 SELEEISERFGWDNLDKIGWGKLDFDLLGTCKGGRIPR 175


>ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arabidopsis lyrata subsp.
           lyrata] gi|297340136|gb|EFH70553.1| hypothetical protein
           ARALYDRAFT_892069 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/106 (65%), Positives = 78/106 (73%), Gaps = 10/106 (9%)
 Frame = -1

Query: 434 LKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLSGDHGSSSSTRNESTVEE 255
           LKWVSKNLRA D E WAKLADEVL D VYKDR EWE AE +L   HGS  S R  ++V++
Sbjct: 86  LKWVSKNLRAGDSEYWAKLADEVLEDDVYKDRTEWEVAEKIL---HGSDESMRALTSVKK 142

Query: 254 ----------LVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPR 147
                     L+E SERFGWDNEDKIGWS+++F LLGTSKGGRIPR
Sbjct: 143 SREEVNSVSMLLEISERFGWDNEDKIGWSKINFELLGTSKGGRIPR 188


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