BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011298
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   144   1e-32
ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   136   2e-30
ref|XP_004146325.1| PREDICTED: WD repeat-containing protein 75-l...   136   2e-30
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   134   1e-29

>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis]
           gi|223526967|gb|EEF29164.1| wd40 protein, putative
           [Ricinus communis]
          Length = 807

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/129 (58%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 VTSVIVLPSGSNSTASKILCYCWTSSLDGTICYWDFSVAELIRKVDIRWPVFSMVIPNII 205
           VT VIV+P+      SKILCYCWT+SLDGTI YWDFSV ELI+ VDI++P+FSMVIP+++
Sbjct: 51  VTRVIVVPA-----TSKILCYCWTASLDGTIRYWDFSVPELIKTVDIKFPIFSMVIPSLL 105

Query: 204 ATPIESKGKPSDLFAFVSVKDASKPDVGSKSLLGQIWKCNLSKSSLVGGV-LAETGYPEF 28
           +   E+  K S LFA+VS+++  + +  SKSL G I KCNL+ S L+GGV L ET  P+F
Sbjct: 106 SQQAETNEKRSKLFAYVSIENTKETEDQSKSLRGLIKKCNLTDSRLLGGVTLTETKQPQF 165

Query: 27  ITISASGEY 1
           ITIS SG+Y
Sbjct: 166 ITISPSGKY 174


>ref|XP_004161786.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           75-like [Cucumis sativus]
          Length = 810

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 VTSVIVLPSGSNSTASKILCYCWTSSLDGTICYWDFSVAELIRKVDIRWPVFSMVIPNII 205
           VTSV V+P+  +S ASKILC+CWT+SLDGTI YWDFS+ EL++ +DIR PV+SMVIP+++
Sbjct: 51  VTSVTVVPA--SSAASKILCFCWTTSLDGTIRYWDFSIPELMKTIDIRLPVYSMVIPSLL 108

Query: 204 ATPIESKGKPSDLFAFVSVKDASKPDVGSKSLLGQIWKCNLSKSSLVGGV-LAETGYPEF 28
              +E   K  DLFA+VSV++    D     + GQI KCNL+KS L  GV LAET  PE+
Sbjct: 109 GQLLERDVKSRDLFAYVSVQNIGVKDGKPVPVRGQILKCNLTKSRLATGVILAETQQPEY 168

Query: 27  ITISASGEY 1
           +T S+SG +
Sbjct: 169 LTTSSSGSF 177


>ref|XP_004146325.1| PREDICTED: WD repeat-containing protein 75-like [Cucumis sativus]
          Length = 810

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 VTSVIVLPSGSNSTASKILCYCWTSSLDGTICYWDFSVAELIRKVDIRWPVFSMVIPNII 205
           VTSV V+P+  +S ASKILC+CWT+SLDGTI YWDFS+ EL++ +DIR PV+SMVIP+++
Sbjct: 51  VTSVTVVPA--SSAASKILCFCWTTSLDGTIRYWDFSIPELMKTIDIRLPVYSMVIPSLL 108

Query: 204 ATPIESKGKPSDLFAFVSVKDASKPDVGSKSLLGQIWKCNLSKSSLVGGV-LAETGYPEF 28
              +E   K  DLFA+VSV++    D     + GQI KCNL+KS L  GV LAET  PE+
Sbjct: 109 GQLLERDVKSRDLFAYVSVQNIGVKDGKPVPVRGQILKCNLTKSRLATGVILAETQQPEY 168

Query: 27  ITISASGEY 1
           +T S+SG +
Sbjct: 169 LTTSSSGSF 177


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
           predicted protein [Populus trichocarpa]
          Length = 812

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/130 (52%), Positives = 98/130 (75%), Gaps = 2/130 (1%)
 Frame = -3

Query: 384 VTSVIVLPSGSNSTASKILCYCWTSSLDGTICYWDFSVAELIRKVDIRWPVFSMVIPNII 205
           VT+VIV+P+  ++ ASKILCYCWT+SLDGTI YWDFSV ELI+ +++  P+ SMVIP+++
Sbjct: 51  VTAVIVVPA--STPASKILCYCWTASLDGTIRYWDFSVPELIKIINVNLPIISMVIPSLL 108

Query: 204 ATPIESKGKPSDLFAFVSVKDASKPDVGS-KSLLGQIWKCNLSKSSLVGGV-LAETGYPE 31
           +   E+  K    FA++SV++  +P+  S K+L GQI KCNL+ S + GG+ L+ET  PE
Sbjct: 109 SQTAETNDKSPKTFAYLSVENTKEPEKESGKALRGQIKKCNLTNSRMAGGMTLSETKQPE 168

Query: 30  FITISASGEY 1
            IT+S+SG+Y
Sbjct: 169 IITVSSSGKY 178


>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  134 bits (336), Expect = 1e-29
 Identities = 73/129 (56%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 VTSVIVLPSGSNSTASKILCYCWTSSLDGTICYWDFSVAELIRKVDIRWPVFSMVIPNII 205
           VTSV+V+P+ + S  SKILCYCWTSSLDGT+ YWDFS+ EL++ VDIR P+FSMVIP I+
Sbjct: 51  VTSVVVVPAFTPS--SKILCYCWTSSLDGTVRYWDFSLPELMKTVDIRLPIFSMVIPGIL 108

Query: 204 ATPIESKGKPSDLFAFVSVKDASKPDVGSKSLLGQIWKCNLSKSSLVGGV-LAETGYPEF 28
           +   E+ GK  +LFA++SV++    D   K +  +I KCNL+KS L  GV LAET  PE 
Sbjct: 109 SQLAETDGKTPNLFAYLSVENTKIQDDQPK-VHRKILKCNLTKSRLAAGVILAETQQPEL 167

Query: 27  ITISASGEY 1
           ITIS+SG++
Sbjct: 168 ITISSSGKF 176