BLASTX nr result

ID: Coptis24_contig00011291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011291
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284604.1| PREDICTED: uncharacterized protein LOC100262...   115   2e-23
ref|XP_002308632.1| predicted protein [Populus trichocarpa] gi|2...   114   9e-23
emb|CAN77979.1| hypothetical protein VITISV_002623 [Vitis vinifera]   113   1e-22
ref|XP_002516605.1| conserved hypothetical protein [Ricinus comm...   111   6e-22
ref|XP_002324260.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21

>ref|XP_002284604.1| PREDICTED: uncharacterized protein LOC100262887 isoform 1 [Vitis
            vinifera] gi|296081932|emb|CBI20937.3| unnamed protein
            product [Vitis vinifera]
          Length = 324

 Score =  115 bits (289), Expect = 2e-23
 Identities = 89/277 (32%), Positives = 114/277 (41%), Gaps = 6/277 (2%)
 Frame = +3

Query: 498  PESQVYWAPAPLVQKSWAXXXXXXXXXYYASTAPPPVWGGSTDHHKETNTPLXXXXXXXX 677
            PE QV+WAPA L  KSWA         YYA+TAPP    G+++  +    P         
Sbjct: 53   PEPQVFWAPARLTVKSWADVDDDDD--YYATTAPPQSVWGTSEQSQTMEKPTQVEESESE 110

Query: 678  XXXXXXXXXXXXXXXXXXXXXXXPGQTEAIVQKPPQATLAPKETERQLSXXXXXXXXXXX 857
                                   P Q E +V+KP +++L  KETERQL+           
Sbjct: 111  EDILDEVDDDLEEEHDHEPEV--PVQPEPVVKKPVESSLVSKETERQLTKKERKKKELAE 168

Query: 858  XXXXXXXXGMSKKETSDQDGSHGVTEEKKSE----EVNGNAEKKETVPVXXXXXXXXXXX 1025
                    G+S+KE++ Q  SHGV++EKK E    E+NG+ EKK+  P            
Sbjct: 169  LEALLADFGVSQKESNGQVESHGVSQEKKEEDKKGELNGDGEKKDNAPTESKNAKKKKKR 228

Query: 1026 XXXXXXXXXL--DQSNGSGTANEQLDEAAGGDQQEEDTSAVDMKERLXXXXXXXXXXXXX 1199
                        D  + S  AN  L+EAA G+Q EE+T AVDMKERL             
Sbjct: 229  DKLSSKEVKESHDLPDSSDAANG-LEEAAAGEQVEEETPAVDMKERLKKMASGKKKKSTK 287

Query: 1200 EMDXXXXXXXXXXXXXXXXXXXXXXXXXNHYNQQPVR 1310
            EMD                         NHYNQQPVR
Sbjct: 288  EMDGAARAAASEAAARSARLAAAKKKEKNHYNQQPVR 324


>ref|XP_002308632.1| predicted protein [Populus trichocarpa] gi|222854608|gb|EEE92155.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  114 bits (284), Expect = 9e-23
 Identities = 83/272 (30%), Positives = 105/272 (38%)
 Frame = +3

Query: 495  QPESQVYWAPAPLVQKSWAXXXXXXXXXYYASTAPPPVWGGSTDHHKETNTPLXXXXXXX 674
            +P+ +V+WAPA L  KSWA         YYA+TAPPP   GS+D  +             
Sbjct: 57   EPDPEVFWAPAKLTAKSWADVDDEDDDDYYATTAPPPSVWGSSDQQQSEEKSAHVEESES 116

Query: 675  XXXXXXXXXXXXXXXXXXXXXXXXPGQTEAIVQKPPQATLAPKETERQLSXXXXXXXXXX 854
                                    P   E +V+K P+  L PKETERQLS          
Sbjct: 117  EEDILDEGDDDVEEEHDHEPEAVHP---EPVVKKTPEVPLPPKETERQLSKKERKKKELA 173

Query: 855  XXXXXXXXXGMSKKETSDQDGSHGVTEEKKSEEVNGNAEKKETVPVXXXXXXXXXXXXXX 1034
                     G+++K+++ QD S    +EKK  E +   +KKE V                
Sbjct: 174  ELEALLADFGVAQKDSNGQDESLDAAQEKKDGETHEEGDKKENVA--GESKNAKKKKKKD 231

Query: 1035 XXXXXXLDQSNGSGTANEQLDEAAGGDQQEEDTSAVDMKERLXXXXXXXXXXXXXEMDXX 1214
                   DQ   S  AN + +EAAG +  EED SAVDMKERL             EMD  
Sbjct: 232  KSAKEPQDQPTNS-EANNKPEEAAGAEHAEEDASAVDMKERLKRMASAKKKKSSKEMDGG 290

Query: 1215 XXXXXXXXXXXXXXXXXXXXXXXNHYNQQPVR 1310
                                   NHYNQQPVR
Sbjct: 291  AKAAAQEAAARSARLAAAKKKEKNHYNQQPVR 322


>emb|CAN77979.1| hypothetical protein VITISV_002623 [Vitis vinifera]
          Length = 337

 Score =  113 bits (283), Expect = 1e-22
 Identities = 90/288 (31%), Positives = 115/288 (39%), Gaps = 17/288 (5%)
 Frame = +3

Query: 498  PESQVYWAPAPLVQKSWAXXXXXXXXXYYASTAPPPVWGGSTDHHKETNTP--------- 650
            PE QV+WAPA L  KSWA         YYA+TAPP    G+++  +    P         
Sbjct: 53   PEPQVFWAPARLTVKSWADVDDDDD--YYATTAPPQSVWGTSEQSQTMEKPTQVEVCGSF 110

Query: 651  --LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGQTEAIVQKPPQATLAPKETERQLS 824
              L                               P Q E +V+KP +++L  KETERQL+
Sbjct: 111  YVLLIGQWESESEEDILDEVDDDLEEEHDHEPEVPVQPEPVVKKPVESSLVSKETERQLT 170

Query: 825  XXXXXXXXXXXXXXXXXXXGMSKKETSDQDGSHGVTEEKKSE----EVNGNAEKKETVPV 992
                               G+S+KE++ Q  SHGV++EKK E    E+NG+ EKK+  P 
Sbjct: 171  KKERKKKELAELEALLADFGVSQKESNGQVESHGVSQEKKEEDKKGELNGDGEKKDNAPT 230

Query: 993  XXXXXXXXXXXXXXXXXXXXL--DQSNGSGTANEQLDEAAGGDQQEEDTSAVDMKERLXX 1166
                                   D  + S  AN  L+EAA G+Q EE+T AVDMKERL  
Sbjct: 231  ESKNAKKKKKRDKLSSKEVKESHDLPDSSDAANG-LEEAAAGEQVEEETPAVDMKERLKK 289

Query: 1167 XXXXXXXXXXXEMDXXXXXXXXXXXXXXXXXXXXXXXXXNHYNQQPVR 1310
                       EMD                         NHYNQQPVR
Sbjct: 290  MASGKKKKSTKEMDGAARAAASEAAARSARLAAAKKKEKNHYNQQPVR 337


>ref|XP_002516605.1| conserved hypothetical protein [Ricinus communis]
            gi|223544425|gb|EEF45946.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 329

 Score =  111 bits (277), Expect = 6e-22
 Identities = 86/276 (31%), Positives = 106/276 (38%), Gaps = 4/276 (1%)
 Frame = +3

Query: 495  QPESQVYWAPAPLVQKSWAXXXXXXXXXYYASTAPPP-VWGGSTDHHKETNTP--LXXXX 665
            + E +V+WAPAPL  KSWA         YYA+TAPP  VWG S     +   P  L    
Sbjct: 55   ETEPEVFWAPAPLNAKSWADVDDEDDDDYYATTAPPQAVWGSSEPQLSDDKPPVHLEESE 114

Query: 666  XXXXXXXXXXXXXXXXXXXXXXXXXXXPGQTEAIVQKPPQATLAPKETERQLSXXXXXXX 845
                                       P   E +V+K P+ +  PKETERQLS       
Sbjct: 115  SEEDILDEGDDDVDEDHDNDNDHEPDVPVHAEPVVKKLPEVSAVPKETERQLSKKERKKK 174

Query: 846  XXXXXXXXXXXXGMSKKETSDQDGSHGVTEEKKSEEVNGNAEKKETVPVXXXXXXXXXXX 1025
                        G+++K+++ Q+ S    +E K  E     EKKE+              
Sbjct: 175  ELEELEALLADFGVAQKDSNGQEESRDAVQEGKDAEPTIEGEKKESAAGESKSAKKKKKK 234

Query: 1026 XXXXXXXXXLDQSNGSGTANEQLDEAAGGDQQ-EEDTSAVDMKERLXXXXXXXXXXXXXE 1202
                      DQS  S  +N   DEAAG +QQ EED SAVDMKERL             E
Sbjct: 235  DKSKEVKETQDQSMNSEISNGP-DEAAGTEQQVEEDASAVDMKERLKRMASAKKKKSSKE 293

Query: 1203 MDXXXXXXXXXXXXXXXXXXXXXXXXXNHYNQQPVR 1310
            MD                         NHYNQQPVR
Sbjct: 294  MDAAAKAAAQEAAARSARLAAAKKKEKNHYNQQPVR 329


>ref|XP_002324260.1| predicted protein [Populus trichocarpa] gi|222865694|gb|EEF02825.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  110 bits (275), Expect = 1e-21
 Identities = 84/273 (30%), Positives = 104/273 (38%), Gaps = 1/273 (0%)
 Frame = +3

Query: 495  QPESQVYWAPAPLVQKSWAXXXXXXXXXYYASTAPPP-VWGGSTDHHKETNTPLXXXXXX 671
            +PE +V+WAPA L  KSWA         YYA+TAPPP VWG S     E  +        
Sbjct: 57   EPEPEVFWAPAKLTAKSWADVDDEDDDDYYATTAPPPSVWGSSQQQKSEEKSA---HVEE 113

Query: 672  XXXXXXXXXXXXXXXXXXXXXXXXXPGQTEAIVQKPPQATLAPKETERQLSXXXXXXXXX 851
                                     P Q E +V+K  +  + PKETERQLS         
Sbjct: 114  SESEEDILDEGDDDVEEENDHEPEAPVQPEPVVKKALEVPVLPKETERQLSKKERKKKEL 173

Query: 852  XXXXXXXXXXGMSKKETSDQDGSHGVTEEKKSEEVNGNAEKKETVPVXXXXXXXXXXXXX 1031
                      G+++K+++ QD S     EKK  E N   +KKE V               
Sbjct: 174  EELEALLADFGVAQKDSNGQDESREAAHEKKDGETNEEGDKKENVA--GESKSAKKKKKK 231

Query: 1032 XXXXXXXLDQSNGSGTANEQLDEAAGGDQQEEDTSAVDMKERLXXXXXXXXXXXXXEMDX 1211
                    DQ   S  A+   +EAA  +Q EED SAVD+KERL             EMD 
Sbjct: 232  EKSAKEPQDQP-ASSEADNGPEEAARAEQAEEDASAVDVKERLKRMASAKKKKSSKEMDG 290

Query: 1212 XXXXXXXXXXXXXXXXXXXXXXXXNHYNQQPVR 1310
                                    NHYNQQPVR
Sbjct: 291  AAKAAAHEAAARSARLAAAKKKEKNHYNQQPVR 323


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