BLASTX nr result

ID: Coptis24_contig00011290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011290
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132
ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinu...   477   e-132
ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]      459   e-127
ref|XP_004144445.1| PREDICTED: pectinesterase 3-like [Cucumis sa...   437   e-120
gb|AFI23414.1| pectin methylesterase [Coffea arabica]                 437   e-120

>ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|222841688|gb|EEE79235.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  478 bits (1231), Expect = e-132
 Identities = 232/402 (57%), Positives = 307/402 (76%), Gaps = 8/402 (1%)
 Frame = +3

Query: 3    AVIGTVVHNNNNKSDSKN---PTTSTAQTIKGVCSVTQYPESCISSLSSVQDSNKITDPK 173
            AVIG VVH  NNKS S     P  + A ++K VCSVTQYP SC SS+S+++  N  TDP+
Sbjct: 46   AVIGAVVHKRNNKSSSNPVPPPELTPATSLKAVCSVTQYPASCFSSISALETGNT-TDPE 104

Query: 174  QLFKLSMQIAINEISRISSLPDQFISNLNDTLAEDALRNCKELFDDSIDQLNTSISSMTV 353
             LFKLS+++A+NE+S++   PD+ I ++ DT  + AL+ C  +FDD++D+LN SISSM +
Sbjct: 105  VLFKLSLRVAMNELSKLKDYPDKLIQSIKDTTLQGALKVCATVFDDAVDRLNDSISSMAI 164

Query: 354  GGGESLSSQQAQIDDIKTWISTAITDQETCLDGLNETTKSDVFNE-----MKMAMKNSTE 518
            G GE + S  A+++D+KTW+S  ITDQETCLD L E + +  FN+     +K AM+NSTE
Sbjct: 165  GEGEQILSP-AKMNDLKTWLSATITDQETCLDALQELSTTKHFNQTLVDQVKTAMENSTE 223

Query: 519  FTSNSLAIVTKVMSVIDHLNIPVHRKLLGYIDHHGSDFPSWLHPMDRRLLQVANPKADIT 698
            F SNSLAIV K++ ++    IP+HR+LLG+   H S+FP W+   DRRLLQ + P  ++T
Sbjct: 224  FVSNSLAIVAKILGLLSDFKIPIHRRLLGFERSHISEFPQWVSFGDRRLLQESKPTPNVT 283

Query: 699  VAKDGSGNFRTITAAIKAVGRKNKTRTVIYVKQGEYVENVVLDKTCWNIMMYGDGKAKTV 878
            VAKDGSG+  T+  A+  + +K++++ +I+VK+G YVENV+LDK+ WN+M+YG+GK KT+
Sbjct: 284  VAKDGSGDCETLREAVGKIPKKSESKFIIHVKEGVYVENVILDKSKWNVMIYGEGKDKTI 343

Query: 879  VSGSSNVVDGTPTFSTAPFIVVGKGFIAKDMGFVNTAGAQKHQAVALRSGSDQSVFYQCS 1058
            VSGS N VDGTPTFST  F V GKGF A+DM F+NTAGA+KHQAVA RSGSD SVFY+C+
Sbjct: 344  VSGSLNFVDGTPTFSTPTFAVAGKGFFARDMKFINTAGAEKHQAVAFRSGSDMSVFYRCA 403

Query: 1059 FGAYQDTLYAHSNRQFYRECDITGTVDFIFGNAAVIFQNCNI 1184
            F A+QDTLYAHSNRQFYR+CDITGT+DFIFGNAAV+FQNCNI
Sbjct: 404  FDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNI 445


>ref|XP_002532945.1| Pectinesterase-3 precursor, putative [Ricinus communis]
            gi|223527274|gb|EEF29429.1| Pectinesterase-3 precursor,
            putative [Ricinus communis]
          Length = 589

 Score =  477 bits (1228), Expect = e-132
 Identities = 240/403 (59%), Positives = 309/403 (76%), Gaps = 9/403 (2%)
 Frame = +3

Query: 3    AVIGTVVHNNNNKS--DSKNPTTST-AQTIKGVCSVTQYPESCISSLSSVQDSNKITDPK 173
            AV+GTV+H  NN S  +S  PT  T A ++K VCSVTQ+P SC SS+SS++ +N  +DP+
Sbjct: 46   AVVGTVIHKRNNDSSPNSAVPTELTPAASLKAVCSVTQFPSSCFSSISSLETANT-SDPE 104

Query: 174  QLFKLSMQIAINEISRISSLPDQFISNLN-DTLAEDALRNCKELFDDSIDQLNTSISSMT 350
             LFKLS+ + INE+S+I   P + I N N D   + AL  C+ +FDD+ D LN SISSMT
Sbjct: 105  VLFKLSLHVVINELSKIKDYPSKLIQNSNLDATVKAALNVCESVFDDAFDMLNDSISSMT 164

Query: 351  VGGGESLSSQQAQIDDIKTWISTAITDQETCLDGLNETT-----KSDVFNEMKMAMKNST 515
            VG GE++ S  ++I+D+KTW+ST ITDQETCLD L E        S V  +++ AM+NST
Sbjct: 165  VGEGETILSP-SKINDMKTWLSTTITDQETCLDALQELNGTKHFDSKVLEDIRTAMENST 223

Query: 516  EFTSNSLAIVTKVMSVIDHLNIPVHRKLLGYIDHHGSDFPSWLHPMDRRLLQVANPKADI 695
            EF SNSLAIV K++ ++   NIP+HRKLLG+ +   S FPSW+   DRRLLQ A P A++
Sbjct: 224  EFASNSLAIVAKIIGLLTDFNIPIHRKLLGF-ERTSSGFPSWVSIGDRRLLQEAKPAANV 282

Query: 696  TVAKDGSGNFRTITAAIKAVGRKNKTRTVIYVKQGEYVENVVLDKTCWNIMMYGDGKAKT 875
            TVAKDGSG++ TI  A+ A+ +K+ +R +I+VK+G YVEN+++DK  WN+M+YGDGK KT
Sbjct: 283  TVAKDGSGDYTTIGEAVDAIPKKSPSRFIIHVKEGTYVENILMDKHKWNVMIYGDGKDKT 342

Query: 876  VVSGSSNVVDGTPTFSTAPFIVVGKGFIAKDMGFVNTAGAQKHQAVALRSGSDQSVFYQC 1055
            ++SGS+N VDGTPTFSTA F V GKGF+A+D+ F+NTAGA KHQAVA RSGSD SV++QC
Sbjct: 343  IISGSTNFVDGTPTFSTATFAVAGKGFMARDIKFINTAGAAKHQAVAFRSGSDMSVYFQC 402

Query: 1056 SFGAYQDTLYAHSNRQFYRECDITGTVDFIFGNAAVIFQNCNI 1184
            SF AYQDTLYAHSNRQFYR+CDITGT+DFIFGNAAV+FQNCNI
Sbjct: 403  SFDAYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNI 445


>ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]
          Length = 578

 Score =  459 bits (1180), Expect = e-127
 Identities = 234/395 (59%), Positives = 300/395 (75%), Gaps = 1/395 (0%)
 Frame = +3

Query: 3    AVIGTVVHNNNNKSDSKNPT-TSTAQTIKGVCSVTQYPESCISSLSSVQDSNKITDPKQL 179
            AV GT++H + ++S+S   +  S A +IK VCSVTQYP+SC+SS+SS+  SN  TDP++L
Sbjct: 46   AVAGTLIHKSKSESNSVPASPVSPATSIKAVCSVTQYPDSCVSSISSLDTSNT-TDPEEL 104

Query: 180  FKLSMQIAINEISRISSLPDQFISNLNDTLAEDALRNCKELFDDSIDQLNTSISSMTVGG 359
            F+L++++AI E+S++SSLP Q  +  ND   + AL  C+ +F+D+ID+LN SISSM V  
Sbjct: 105  FRLTLRVAIAELSKLSSLPRQLSAKSNDAQLKKALGVCETVFEDAIDRLNDSISSMEVRE 164

Query: 360  GESLSSQQAQIDDIKTWISTAITDQETCLDGLNETTKSDVFNEMKMAMKNSTEFTSNSLA 539
            GE L S  ++IDDIKTW+S  ITDQETCLD L E   S + NE+K AM+NST F SNSLA
Sbjct: 165  GEKLLSA-SKIDDIKTWLSATITDQETCLDALEELN-STLLNEVKTAMQNSTVFASNSLA 222

Query: 540  IVTKVMSVIDHLNIPVHRKLLGYIDHHGSDFPSWLHPMDRRLLQVANPKADITVAKDGSG 719
            IV K++ ++  L+I VHRKLL +   +   FP W+   +RRLLQ   P  D+TVAKDG+G
Sbjct: 223  IVAKLIGILHDLDIQVHRKLLSF--SNSDQFPDWVGAGERRLLQETKPTPDVTVAKDGTG 280

Query: 720  NFRTITAAIKAVGRKNKTRTVIYVKQGEYVENVVLDKTCWNIMMYGDGKAKTVVSGSSNV 899
            ++ TI  A+  V +K++ R VIYVK+G Y EN++LDK+ WN+M+YGDGK K++VSG+ N 
Sbjct: 281  DYVTIKEAVAMVPKKSEKRFVIYVKEGNYSENIILDKSKWNVMIYGDGKDKSIVSGNLNF 340

Query: 900  VDGTPTFSTAPFIVVGKGFIAKDMGFVNTAGAQKHQAVALRSGSDQSVFYQCSFGAYQDT 1079
            +DGTPTF+TA F  VGKGFIAK M F NTAGA KHQAVA RSGSD SVFYQCSF A+QDT
Sbjct: 341  IDGTPTFATATFAAVGKGFIAKYMRFENTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDT 400

Query: 1080 LYAHSNRQFYRECDITGTVDFIFGNAAVIFQNCNI 1184
            LYAHSNRQFYRECDITGT+DFIFGNAAV+FQ C I
Sbjct: 401  LYAHSNRQFYRECDITGTIDFIFGNAAVVFQACKI 435


>ref|XP_004144445.1| PREDICTED: pectinesterase 3-like [Cucumis sativus]
            gi|449528768|ref|XP_004171375.1| PREDICTED:
            pectinesterase 3-like [Cucumis sativus]
          Length = 576

 Score =  437 bits (1125), Expect = e-120
 Identities = 224/399 (56%), Positives = 282/399 (70%), Gaps = 5/399 (1%)
 Frame = +3

Query: 3    AVIGTVVHNNNNKSDSKN----PTTSTAQ-TIKGVCSVTQYPESCISSLSSVQDSNKITD 167
            AV+G VVH  N+ S S      PT  T   ++K +CSVTQYP SC SSL   Q+SN  TD
Sbjct: 46   AVVGIVVHKRNSSSSSTTTSPPPTELTPPASLKTLCSVTQYPSSCQSSL---QNSNT-TD 101

Query: 168  PKQLFKLSMQIAINEISRISSLPDQFISNLNDTLAEDALRNCKELFDDSIDQLNTSISSM 347
            P  LFKLS+++A + +S++S     F S   D   E A++ C+ +F+D+ID LN ++SSM
Sbjct: 102  PVFLFKLSLRVATDSLSKLSDYTSNFNSTTGDPKVEAAIKICRSVFEDAIDTLNDTVSSM 161

Query: 348  TVGGGESLSSQQAQIDDIKTWISTAITDQETCLDGLNETTKSDVFNEMKMAMKNSTEFTS 527
             V          ++I+D+KTW+ST ITDQETCLD L +  ++ V  +++ AM NSTEFTS
Sbjct: 162  EVDRHSEKFLSPSRIEDLKTWLSTTITDQETCLDALRDLNQTTVLQDLQTAMANSTEFTS 221

Query: 528  NSLAIVTKVMSVIDHLNIPVHRKLLGYIDHHGSDFPSWLHPMDRRLLQVANPKADITVAK 707
            NSLAIVTK++ ++   NIP+HRKL+G         P W+   DRRLLQ  N  A +TV+K
Sbjct: 222  NSLAIVTKILGLLADFNIPIHRKLMG--------LPEWVSSGDRRLLQENNVTAHVTVSK 273

Query: 708  DGSGNFRTITAAIKAVGRKNKTRTVIYVKQGEYVENVVLDKTCWNIMMYGDGKAKTVVSG 887
            DG G + TI  A+ AV +K+K R +I+VK+G Y ENV+LDK+ WN+MMYGDG+ KT+VSG
Sbjct: 274  DGKGQYTTIQDAVAAVPKKSKERFIIHVKEGIYEENVILDKSKWNVMMYGDGRTKTIVSG 333

Query: 888  SSNVVDGTPTFSTAPFIVVGKGFIAKDMGFVNTAGAQKHQAVALRSGSDQSVFYQCSFGA 1067
              N +DGTPTFSTA F V GKGFI KDMGF+NTAG  KHQAVA RSGSD SV   CSF  
Sbjct: 334  HLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAGPAKHQAVAFRSGSDLSVMSGCSFDG 393

Query: 1068 YQDTLYAHSNRQFYRECDITGTVDFIFGNAAVIFQNCNI 1184
            YQDTLYAHSNRQFYR+CDITGT+DFIFGNAAV+FQNCNI
Sbjct: 394  YQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNI 432


>gb|AFI23414.1| pectin methylesterase [Coffea arabica]
          Length = 582

 Score =  437 bits (1123), Expect = e-120
 Identities = 212/396 (53%), Positives = 288/396 (72%), Gaps = 3/396 (0%)
 Frame = +3

Query: 6    VIGTVVHNN-NNKSDSKNPTTSTAQTIKGVCSVTQYPESCISSLSSVQDSNKITDPKQLF 182
            V+ TV H   N+K ++ +  TS +Q+++ +CSVT +P+SC +S+SS++ SN  TDP++LF
Sbjct: 48   VVATVAHKKKNSKGNANDAPTSPSQSLRAICSVTVHPDSCYTSISSLEASNSTTDPEKLF 107

Query: 183  KLSMQIAINEISRISSLPDQFISNLNDTLAEDALRNCKELFDDSIDQLNTSISSMTVGGG 362
            +LS+Q+    + ++S+LP  +IS+  D   + AL  C+ + DD++D  + S+SS+ V  G
Sbjct: 108  QLSLQVVHASLQKLSTLPQHWISDARDLPLKKALGVCQAVIDDAVDATDESLSSLNVSEG 167

Query: 363  ESLSSQQAQIDDIKTWISTAITDQETCLDGLNETTKSDVFNEMKMAMKNSTEFTSNSLAI 542
            + L +   +++D+KTW+S ++TD ETCLD L E   + +  +++ + +NSTEF SNSLAI
Sbjct: 168  DRLLTVD-RVNDLKTWLSASLTDLETCLDSLQEVNATVLAEQVRASSRNSTEFASNSLAI 226

Query: 543  VTKVMSVIDHLNIPVHRKLLGYIDHHGSDFPSWLHPMDRRLLQVANP--KADITVAKDGS 716
            V+K+++++   NIP+HRKLL         FP W+   DRRLLQ  N   K D+ VA+DGS
Sbjct: 227  VSKLLTILSGFNIPIHRKLLAAGTDSDGGFPRWVRAADRRLLQTPNENTKPDLVVAQDGS 286

Query: 717  GNFRTITAAIKAVGRKNKTRTVIYVKQGEYVENVVLDKTCWNIMMYGDGKAKTVVSGSSN 896
            G++RTI+ A+  + +K+KTR VIYVK G Y E V LDK+ WN+MMYGDGKAKT+V+   N
Sbjct: 287  GDYRTISEAVAKIPKKSKTRFVIYVKAGVYKEKVSLDKSTWNVMMYGDGKAKTIVTSDDN 346

Query: 897  VVDGTPTFSTAPFIVVGKGFIAKDMGFVNTAGAQKHQAVALRSGSDQSVFYQCSFGAYQD 1076
             VDGTPTF TA F V GKGFIAK M F NTAGA KHQAVA RSGSDQSV Y CSF A+QD
Sbjct: 347  FVDGTPTFDTATFAVAGKGFIAKSMAFRNTAGAAKHQAVAFRSGSDQSVLYLCSFDAFQD 406

Query: 1077 TLYAHSNRQFYRECDITGTVDFIFGNAAVIFQNCNI 1184
            TLY HSNRQFYRECDI+GT+DFIFGNAAV+FQNCNI
Sbjct: 407  TLYPHSNRQFYRECDISGTIDFIFGNAAVVFQNCNI 442


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