BLASTX nr result
ID: Coptis24_contig00011289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011289
(3068 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding fact... 706 0.0
ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding fact... 704 0.0
ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding fact... 685 0.0
ref|XP_002513154.1| gc-rich sequence DNA-binding factor, putativ... 660 0.0
ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidops... 625 e-176
>ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
sativus]
Length = 889
Score = 706 bits (1821), Expect = 0.0
Identities = 368/624 (58%), Positives = 457/624 (73%), Gaps = 5/624 (0%)
Frame = +1
Query: 790 QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGT-GYQSTHSGTIGPVIGGSLGVS 966
QFRKGLGKR+DD Y T GY S S + IGGS+ +S
Sbjct: 267 QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTTIGYSSVPSVSTATSIGGSVSIS 326
Query: 967 RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
+ + +SISQ+A+IA AMQ+++ RL+ES+ RT S+ K +E ITDLEK+LSA
Sbjct: 327 QGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALSA 386
Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
AG+KFI+MQKLRDFVSVICDFL+HK +++ELE++++KL E+RAS +VERR D+ DEM
Sbjct: 387 AGDKFIFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEMV 446
Query: 1327 EIEAAISAARSVL-KKGDSSXXXXXXXXXXXXXM---KDQSNLPVELDEFGRDKNLQKRL 1494
EIE A+ AA S+L KKG S+ + ++Q+NLP +LDEFGRD NLQKR+
Sbjct: 447 EIETAVKAAISILNKKGSSNEMITAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKRM 506
Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
D+ D +++ S+ D + +V Y+ NRD LQ A
Sbjct: 507 DMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQTA 565
Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
E++FSDA+EE+SQLSVVK+RFE WK+ YS +YRDAYMSLS+P+IF+PYVRLELLKWDPL+
Sbjct: 566 EQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPLH 625
Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
E DF DM WHSLLF+YG+P+DGSDF +D D NLVP LVEK+ALPILHH+IAHCWD+LS
Sbjct: 626 ESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVPELVEKVALPILHHEIAHCWDMLS 685
Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
TRET+NA +AT L+ NYVP SSEAL ELL I TR + AI LTVPTW L KAVPNAA
Sbjct: 686 TRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLSGAIEDLTVPTWNSLVTKAVPNAA 745
Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
R+AAY+FGMS+RL+RNICLWK+I+ LP LEKLAL+ELL GK+LPHVRS+ +NIHDA+TRT
Sbjct: 746 RIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEELLYGKVLPHVRSITANIHDAVTRT 805
Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
ERIIAS++GVW G G +G RS KLQ LVDYVL LG+TLEKKH+SG++ESETSGLARRLKK
Sbjct: 806 ERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRTLEKKHISGIAESETSGLARRLKK 865
Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
MLVELNEYD AR +A+ F LKEAL
Sbjct: 866 MLVELNEYDNARDIAKTFHLKEAL 889
Score = 137 bits (344), Expect = 2e-29
Identities = 102/242 (42%), Positives = 131/242 (54%), Gaps = 35/242 (14%)
Frame = +2
Query: 2 RNKNFRRVRHADDEEXXXXXXXXXXRRLSFADEEEDVTRKPTSSSSKLNTR-----KPSS 166
R +NFRR ADD + +S ++ + KP+S+SS + T+ +PSS
Sbjct: 5 RARNFRR--RADDNDDDDEPKGSTAPSISASN----ASSKPSSTSSVVATKPKKFQEPSS 58
Query: 167 -------SSHRLTTPKT--------TSSFVTNVQPQTGQYTKEKLLELEKNTPTL----- 286
S+H++T K ++S +NVQPQ G YTKE L EL+KNT TL
Sbjct: 59 ARLAKPSSTHKITALKDRIAHSSSISASVPSNVQPQAGVYTKEALRELQKNTRTLASSRP 118
Query: 287 ---SRPRHPPLFILKGLVKP-ESAKDQDND-KEELLEDGLAILGIDQIDVLDQAAINAIR 451
S+P P+ +LKGL+KP E D + KE ED A + DQA INAIR
Sbjct: 119 SSESKPSAEPVIVLKGLLKPAEQVPDSAREAKESSSEDDEAGKDSSGSSIPDQATINAIR 178
Query: 452 AKRERLRKSRAVASDYISLDGGSNHGEAEGLSDEEPEFQGRIALLG-----DKKGVFESV 616
AKRER+R++ A DYISLD GSN LSDEE EF GRIA++G KKGVFE V
Sbjct: 179 AKRERMRQAGVAAPDYISLDAGSNRTAPGELSDEEAEFPGRIAMIGGKLESSKKGVFEEV 238
Query: 617 DE 622
DE
Sbjct: 239 DE 240
>ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
sativus]
Length = 920
Score = 704 bits (1818), Expect = 0.0
Identities = 367/624 (58%), Positives = 457/624 (73%), Gaps = 5/624 (0%)
Frame = +1
Query: 790 QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGT-GYQSTHSGTIGPVIGGSLGVS 966
QFRKGLGKR+DD Y T GY S S + IGGS+ +S
Sbjct: 298 QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTTIGYSSVPSMSTATSIGGSVSIS 357
Query: 967 RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
+ + +SISQ+A+IA AMQ+++ RL+ES+ RT S+ K +E ITDLEK+LSA
Sbjct: 358 QGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALSA 417
Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
AG+KF++MQKLRDFVSVICDFL+HK +++ELE++++KL E+RAS +VERR D+ DEM
Sbjct: 418 AGDKFMFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEMV 477
Query: 1327 EIEAAISAARSVL-KKGDSSXXXXXXXXXXXXXM---KDQSNLPVELDEFGRDKNLQKRL 1494
EIE A+ AA S+L KKG S+ + ++Q+NLP +LDEFGRD NLQKR+
Sbjct: 478 EIETAVKAAISILNKKGSSNEMVTAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKRM 537
Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
D+ D +++ S+ D + +V Y+ NRD LQ A
Sbjct: 538 DMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQTA 596
Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
E++FSDA+EE+SQLSVVK+RFE WK+ YS +YRDAYMSLS+P+IF+PYVRLELLKWDPL+
Sbjct: 597 EQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPLH 656
Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
E DF DM WHSLLF+YG+P+DGSDF +D D NLVP LVEK+ALPILHH+IAHCWD+LS
Sbjct: 657 ESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVPELVEKVALPILHHEIAHCWDMLS 716
Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
TRET+NA +AT L+ NYVP SSEAL ELL I TR + AI LTVPTW L KAVPNAA
Sbjct: 717 TRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLSGAIEDLTVPTWNSLVTKAVPNAA 776
Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
R+AAY+FGMS+RL+RNICLWK+I+ LP LEKLAL+ELL GK+LPHVRS+ +NIHDA+TRT
Sbjct: 777 RIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEELLYGKVLPHVRSITANIHDAVTRT 836
Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
ERIIAS++GVW G G +G RS KLQ LVDYVL LG+TLEKKH+SG++ESETSGLARRLKK
Sbjct: 837 ERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRTLEKKHISGIAESETSGLARRLKK 896
Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
MLVELNEYD AR +A+ F LKEAL
Sbjct: 897 MLVELNEYDNARDIAKTFHLKEAL 920
Score = 140 bits (354), Expect = 2e-30
Identities = 97/214 (45%), Positives = 123/214 (57%), Gaps = 34/214 (15%)
Frame = +2
Query: 83 LSFA-DEEEDVTRKPTSSSSKLNTRKPSS-------SSHRLTTPKT--------TSSFVT 214
LSFA DEE D +P+SS S +++KPSS S+H++T K ++S +
Sbjct: 61 LSFASDEENDAPLRPSSSKSS-SSKKPSSARLAKPSSTHKITALKDRIAHSSSISASVPS 119
Query: 215 NVQPQTGQYTKEKLLELEKNTPTL--------SRPRHPPLFILKGLVKP-----ESAKDQ 355
NVQPQ G YTKE L EL+KNT TL S+P P+ +LKGL+KP +SA++
Sbjct: 120 NVQPQAGVYTKEALRELQKNTRTLASSRPSSESKPSAEPVIVLKGLLKPAEQVPDSAREA 179
Query: 356 DNDKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEA 535
E +D + DQA INAIRAKRER+R++ A DYISLD GSN
Sbjct: 180 KESSSE--DDEAGRKDSSGSSIPDQATINAIRAKRERMRQAGVAAPDYISLDAGSNRTAP 237
Query: 536 EGLSDEEPEFQGRIALLG-----DKKGVFESVDE 622
LSDEE EF GRIA++G KKGVFE VDE
Sbjct: 238 GELSDEEAEFPGRIAMIGGKLESSKKGVFEEVDE 271
>ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Vitis
vinifera]
Length = 913
Score = 685 bits (1768), Expect = 0.0
Identities = 351/624 (56%), Positives = 450/624 (72%), Gaps = 5/624 (0%)
Frame = +1
Query: 790 QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQSTHSGTIGPV-IGGSLGVS 966
QFRKGLGKR+DD Y ++ G P+ IGG++G
Sbjct: 291 QFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYTSVPGVSAPLNIGGAVGPL 350
Query: 967 RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
+ MS+SQ+A++A +A+ +N++RL+ESHGRT SS+ + +E IT LEKSL+A
Sbjct: 351 PGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRTDENLSSSLSNITTLEKSLTA 410
Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
AGEKFI+MQ LRDFVSVICDFL+HK +++ELE++++KL E+RASAI+ERR D+ DEM
Sbjct: 411 AGEKFIFMQXLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASAILERRAADN-DEMM 469
Query: 1327 EIEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQKRL 1494
EI+A++ AA SV K S+ M++Q+NLPV+LDE+GRD NLQK +
Sbjct: 470 EIQASVDAAMSVFTKSGSNEAMVAAARTAAQAASAAMREQTNLPVKLDEYGRDINLQKCM 529
Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
D D +++ + +++++ ++ Y+ NRD LQ A
Sbjct: 530 DKNRRSEARQRKRDRWDAKRMTFLENESSHQKIEGESSTDESDSETTAYQSNRDLLLQTA 589
Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
E++F DA+EEYSQLS VKER E+WK+ YS SYRDAYMSLSVP+IF+PYVRLELLKWDPL
Sbjct: 590 EQIFGDAAEEYSQLSAVKERIERWKKQYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLY 649
Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
E+ DF+DM+WHSLLF+YG+ +DG+DF+ DD D NLVP LVE++ALPILHH++AHCWDI S
Sbjct: 650 EEADFDDMKWHSLLFNYGLSEDGNDFSPDDADANLVPELVERVALPILHHELAHCWDIFS 709
Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
TRETKNAV AT+LVI Y+PASSEAL ELLA +H R A+ VP W L +KAVPNAA
Sbjct: 710 TRETKNAVSATNLVIRYIPASSEALGELLAVVHKRLYKALTNFMVPPWNILVMKAVPNAA 769
Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
RVAAY+FGMSIRL+RNICLWKDIL LP LEKL LD+LL G++LPH+ ++ S++HDAITRT
Sbjct: 770 RVAAYRFGMSIRLMRNICLWKDILALPVLEKLVLDQLLSGQVLPHIENIASDVHDAITRT 829
Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
ERII+S+SGVWAGP G RS KLQ LVDYVL LGK LEK+H+ GV+ES+TS LARRLK+
Sbjct: 830 ERIISSLSGVWAGPSVTGERSNKLQPLVDYVLRLGKRLEKRHLPGVTESDTSRLARRLKR 889
Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
MLVELNEYD+AR ++R F LKEAL
Sbjct: 890 MLVELNEYDKARDISRTFHLKEAL 913
Score = 174 bits (442), Expect = 1e-40
Identities = 110/212 (51%), Positives = 139/212 (65%), Gaps = 32/212 (15%)
Frame = +2
Query: 83 LSFADEEEDVT------------RKPTSSSSKLNTRKPSSSSHRLTTPK-----TTSSFV 211
LSFAD+EE+ + +P+ +SS+ T+ SSSSH++TT K +++S
Sbjct: 54 LSFADDEENESPSRSSSRSTQPPSRPSKTSSRF-TKLSSSSSHKITTTKDRLTPSSASLP 112
Query: 212 TNVQPQTGQYTKEKLLELEKNTPTLS---------RPRHPPLFILKGLVKPESA-KDQDN 361
+NVQPQ G YTKE L EL+KNT TL+ +P P+ +LKGLVKP SA +D
Sbjct: 113 SNVQPQAGTYTKEALRELQKNTRTLASSRPASSEPKPSLEPVIVLKGLVKPISAAEDAVI 172
Query: 362 DKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEAEG 541
D+E + E+ + + + DQA INAIRAKRERLR+SRA A DYISLDGGSNHG AEG
Sbjct: 173 DEENVEEEPESKDKGGRDSIPDQATINAIRAKRERLRQSRAAAPDYISLDGGSNHGAAEG 232
Query: 542 LSDEEPEFQGRIALLGD-----KKGVFESVDE 622
LSDEEPEFQGRIA+ G+ KKGVFE VDE
Sbjct: 233 LSDEEPEFQGRIAMFGEKPESGKKGVFEDVDE 264
>ref|XP_002513154.1| gc-rich sequence DNA-binding factor, putative [Ricinus communis]
gi|223548165|gb|EEF49657.1| gc-rich sequence DNA-binding
factor, putative [Ricinus communis]
Length = 885
Score = 660 bits (1703), Expect = 0.0
Identities = 347/623 (55%), Positives = 433/623 (69%), Gaps = 4/623 (0%)
Frame = +1
Query: 790 QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQSTHSGTIGPVIGGSLGVSR 969
QFRK LGKR+DD T HS + P IGG+ G +
Sbjct: 274 QFRKALGKRMDDPSSSTPSLFPTPSTSTIT-------TTNNHRHSHIV-PTIGGAFGPTP 325
Query: 970 SAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSAA 1149
+ +S+ Q++ IA +A+ N+ RL+ESH RT SS+ K +E IT LEKSLSAA
Sbjct: 326 GLDALSVPQQSHIARKALLDNLTRLKESHNRTVSSLTKADENLSASLMNITALEKSLSAA 385
Query: 1150 GEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMNE 1329
GEKFI+MQKLRDFVSVIC+FL+HK Y++ELE++++ L E RASAI+ERR D+ DEM E
Sbjct: 386 GEKFIFMQKLRDFVSVICEFLQHKAPYIEELEEQMQTLHEQRASAILERRTADNDDEMME 445
Query: 1330 IEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQKRLD 1497
++ A+ AA+ V S+ MK+Q NLPV+LDEFGRD N QKRLD
Sbjct: 446 VKTALEAAKKVFSARGSNEAAITAAMNAAQDASASMKEQINLPVKLDEFGRDINQQKRLD 505
Query: 1498 VMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVAE 1677
+ +++ SV D + +V Y+ NRD LQ A+
Sbjct: 506 MKRRAEARQRRKAQ---KKLSSVEVDGSNQKVEGESSTDESDSESAAYQSNRDLLLQTAD 562
Query: 1678 ELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLNE 1857
++F DASEEY QLSVVK+RFE WK+ YS SYRDAYMS+S P+IF+PYVRLELLKWDPL+E
Sbjct: 563 QIFGDASEEYCQLSVVKQRFENWKKEYSTSYRDAYMSISAPAIFSPYVRLELLKWDPLHE 622
Query: 1858 DKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILST 2037
D F M+WHSLL YG+P+DGSD + +D D NLVP LVEK+A+PILHH+IAHCWD+LST
Sbjct: 623 DAGFFHMKWHSLLSDYGLPQDGSDLSPEDADANLVPELVEKVAIPILHHEIAHCWDMLST 682
Query: 2038 RETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAAR 2217
RETKNAV+AT+LV +YVPASSEAL ELL I TR DA+ + VPTW+P+E+KAVP AA+
Sbjct: 683 RETKNAVFATNLVTDYVPASSEALAELLLAIRTRLTDAVVSIMVPTWSPIELKAVPRAAQ 742
Query: 2218 VAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRTE 2397
+AAY+FGMS+RL++NICLWKDIL LP LEKLALD+LL K+LPH++SV SN+HDA+TRTE
Sbjct: 743 IAAYRFGMSVRLMKNICLWKDILSLPVLEKLALDDLLCRKVLPHLQSVASNVHDAVTRTE 802
Query: 2398 RIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKKM 2577
RIIAS+SGVWAG RS KLQ LVD V++LGK L+ KH G SE E SGLARRLKKM
Sbjct: 803 RIIASLSGVWAGTSVTASRSHKLQPLVDCVMSLGKRLKDKHPLGASEIEVSGLARRLKKM 862
Query: 2578 LVELNEYDRARALARGFQLKEAL 2646
LVELN+YD+AR +AR F L+EAL
Sbjct: 863 LVELNDYDKAREIARMFSLREAL 885
Score = 125 bits (315), Expect = 5e-26
Identities = 87/199 (43%), Positives = 111/199 (55%), Gaps = 28/199 (14%)
Frame = +2
Query: 83 LSFADEEEDVTRKPTSSSSKLNTRKPSSSSHRLTTPK-------TTSSFVTNVQ------ 223
LSFAD+EE+ P S K + K SSH+LT PK TTS+ TN
Sbjct: 44 LSFADDEEEDEETPRPSKQKPSKTK---SSHKLTAPKDRLSSSSTTSTTSTNTNSNNVLL 100
Query: 224 PQTGQYTKEKLLELEKNTPTLSRPRHPP----------LFILKGLVKPE-----SAKDQD 358
PQ G YTKE LLEL+K T TL++P P ILKGL+KP + +D D
Sbjct: 101 PQAGTYTKEALLELQKKTRTLAKPSSKPPPPPPSSSEPKIILKGLLKPTLPQTLNQQDAD 160
Query: 359 NDKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEAE 538
++E++ D D + D+ I IRAKRERLR+SRA A DYISLDGG+ ++
Sbjct: 161 PPQDEIIIDE------DYSLIPDEDTIKKIRAKRERLRQSRATAPDYISLDGGA--ATSD 212
Query: 539 GLSDEEPEFQGRIALLGDK 595
SDEEPEF+ RIA++G K
Sbjct: 213 AFSDEEPEFRNRIAMIGKK 231
>ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
gi|297319207|gb|EFH49629.1| increased level of
polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
Length = 908
Score = 625 bits (1611), Expect = e-176
Identities = 327/626 (52%), Positives = 428/626 (68%), Gaps = 7/626 (1%)
Frame = +1
Query: 790 QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQST-HSGTIGPVIG--GSLG 960
QF+KG+GKR+D+ H T H+GT P I ++G
Sbjct: 283 QFKKGIGKRMDEGSHRSVTSNGIGVPLHSNQQSLPHQQPQMYTYHAGTPMPNISVAPTIG 342
Query: 961 VSRSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSL 1140
+ S + + +SQ+A +A +A+Q N+K+L+ESH +T SS+ K +E IT LE SL
Sbjct: 343 PATSVDTLPMSQQAALAKKALQDNVKKLKESHAKTLSSLTKTDENLTASLMSITALESSL 402
Query: 1141 SAAGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDE 1320
SAAG+K+++MQKLRDF+SVICDF+++K S ++E+ED++++L E A +I+ERR D+ DE
Sbjct: 403 SAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEKHALSILERRIADNNDE 462
Query: 1321 MNEIEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQK 1488
M E+ AA+ AA +VL K SS ++ Q N PV+LDEFGRD+NLQK
Sbjct: 463 MIELGAAVKAAMTVLNKQGSSTSVIAAATSAALAASASIRQQMNQPVKLDEFGRDENLQK 522
Query: 1489 RLDVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQ 1668
R +V + ++ ++ + + ++ Y++ RD LQ
Sbjct: 523 RREVEQRAAARQKRRARFENKRASAMEIEGSSLKIEGESSTDESDTETSAYKETRDSLLQ 582
Query: 1669 VAEELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDP 1848
A+++FSDASEEYSQLS VK RFE+WK+ YS +YRDAYMSL+VPSIF+PYVRLELLKWDP
Sbjct: 583 CADKVFSDASEEYSQLSRVKARFERWKRDYSSTYRDAYMSLTVPSIFSPYVRLELLKWDP 642
Query: 1849 LNEDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDI 2028
L++D DF DM+WH LLF YG P+DG DF DD D NLVP LVEK+A+PILHHQI CWDI
Sbjct: 643 LHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDTDANLVPELVEKVAIPILHHQIVRCWDI 702
Query: 2029 LSTRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPN 2208
LSTRET+NAV AT LV NYV ASSEAL EL A I R +AIA ++VPTW PL +KAVPN
Sbjct: 703 LSTRETRNAVAATSLVTNYVSASSEALAELFAAIRARLVEAIAAISVPTWDPLVLKAVPN 762
Query: 2209 AARVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAIT 2388
A +VAAY+FG S+RL+RNIC+WKDIL L LE LAL +LL GK+LPHVRS+ SNIHDA+T
Sbjct: 763 APQVAAYRFGTSVRLMRNICMWKDILALSVLENLALSDLLFGKVLPHVRSIASNIHDAVT 822
Query: 2389 RTERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRL 2568
RTERI+AS+SGVW GP S+ LQ LVD LTL + LEK+ SG+ ++ET+GLARRL
Sbjct: 823 RTERIVASLSGVWTGPSVTRTHSRPLQPLVDCTLTLRRILEKRLASGLDDAETTGLARRL 882
Query: 2569 KKMLVELNEYDRARALARGFQLKEAL 2646
K++LVEL+E+D AR + R F LKEA+
Sbjct: 883 KRILVELHEHDHAREIVRTFNLKEAV 908
Score = 119 bits (299), Expect = 4e-24
Identities = 91/208 (43%), Positives = 120/208 (57%), Gaps = 28/208 (13%)
Frame = +2
Query: 83 LSFADEEED-------VTRKPTSSSSKLNTR---KPSSSSHRLTTPKTTSSFVTNVQPQT 232
LSFAD+EE+ VT KP + ++ + S SSHR ++ K +NV PQ
Sbjct: 53 LSFADDEEEEEDGAPRVTIKPKNGRDRVKSSFRLGVSGSSHRHSSTKEHRPASSNVLPQA 112
Query: 233 GQYTKEKLLELEKNTPTL--SRP--RHPPLFILKGLVKPESAKDQDNDKEELLEDGLAIL 400
G Y+KE LLEL+KNT TL SRP P +LKGL+KP +Q + K+ + + ++ L
Sbjct: 113 GSYSKEALLELQKNTRTLPYSRPSSNSEPKVVLKGLIKPPHQHEQQSLKDVVKQ--VSDL 170
Query: 401 GIDQID--------VLDQAAINAIRAKRERLRKSR-AVASDYISLDGG-SNHGEAEGLSD 550
D+ DQAAI IRAK+ER+R+SR A A DYISLDGG +NH EG+SD
Sbjct: 171 DFDEEGEKEQPEDAFADQAAI--IRAKKERMRQSRSAPAPDYISLDGGTANHSAVEGVSD 228
Query: 551 EEPEFQGRIA----LLGDKKGVFESVDE 622
E+ +FQG GDKKGVF+ DE
Sbjct: 229 EDADFQGIFVGARPHKGDKKGVFDFGDE 256