BLASTX nr result

ID: Coptis24_contig00011289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011289
         (3068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding fact...   706   0.0  
ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding fact...   704   0.0  
ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding fact...   685   0.0  
ref|XP_002513154.1| gc-rich sequence DNA-binding factor, putativ...   660   0.0  
ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidops...   625   e-176

>ref|XP_004159322.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
            sativus]
          Length = 889

 Score =  706 bits (1821), Expect = 0.0
 Identities = 368/624 (58%), Positives = 457/624 (73%), Gaps = 5/624 (0%)
 Frame = +1

Query: 790  QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGT-GYQSTHSGTIGPVIGGSLGVS 966
            QFRKGLGKR+DD                      Y  T GY S  S +    IGGS+ +S
Sbjct: 267  QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTTIGYSSVPSVSTATSIGGSVSIS 326

Query: 967  RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
            +  + +SISQ+A+IA  AMQ+++ RL+ES+ RT  S+ K +E        ITDLEK+LSA
Sbjct: 327  QGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALSA 386

Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
            AG+KFI+MQKLRDFVSVICDFL+HK  +++ELE++++KL E+RAS +VERR  D+ DEM 
Sbjct: 387  AGDKFIFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEMV 446

Query: 1327 EIEAAISAARSVL-KKGDSSXXXXXXXXXXXXXM---KDQSNLPVELDEFGRDKNLQKRL 1494
            EIE A+ AA S+L KKG S+             +   ++Q+NLP +LDEFGRD NLQKR+
Sbjct: 447  EIETAVKAAISILNKKGSSNEMITAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKRM 506

Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
            D+              D +++ S+  D  + +V               Y+ NRD  LQ A
Sbjct: 507  DMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQTA 565

Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
            E++FSDA+EE+SQLSVVK+RFE WK+ YS +YRDAYMSLS+P+IF+PYVRLELLKWDPL+
Sbjct: 566  EQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPLH 625

Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
            E  DF DM WHSLLF+YG+P+DGSDF  +D D NLVP LVEK+ALPILHH+IAHCWD+LS
Sbjct: 626  ESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVPELVEKVALPILHHEIAHCWDMLS 685

Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
            TRET+NA +AT L+ NYVP SSEAL ELL  I TR + AI  LTVPTW  L  KAVPNAA
Sbjct: 686  TRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLSGAIEDLTVPTWNSLVTKAVPNAA 745

Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
            R+AAY+FGMS+RL+RNICLWK+I+ LP LEKLAL+ELL GK+LPHVRS+ +NIHDA+TRT
Sbjct: 746  RIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEELLYGKVLPHVRSITANIHDAVTRT 805

Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
            ERIIAS++GVW G G +G RS KLQ LVDYVL LG+TLEKKH+SG++ESETSGLARRLKK
Sbjct: 806  ERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRTLEKKHISGIAESETSGLARRLKK 865

Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
            MLVELNEYD AR +A+ F LKEAL
Sbjct: 866  MLVELNEYDNARDIAKTFHLKEAL 889



 Score =  137 bits (344), Expect = 2e-29
 Identities = 102/242 (42%), Positives = 131/242 (54%), Gaps = 35/242 (14%)
 Frame = +2

Query: 2   RNKNFRRVRHADDEEXXXXXXXXXXRRLSFADEEEDVTRKPTSSSSKLNTR-----KPSS 166
           R +NFRR   ADD +            +S ++     + KP+S+SS + T+     +PSS
Sbjct: 5   RARNFRR--RADDNDDDDEPKGSTAPSISASN----ASSKPSSTSSVVATKPKKFQEPSS 58

Query: 167 -------SSHRLTTPKT--------TSSFVTNVQPQTGQYTKEKLLELEKNTPTL----- 286
                  S+H++T  K         ++S  +NVQPQ G YTKE L EL+KNT TL     
Sbjct: 59  ARLAKPSSTHKITALKDRIAHSSSISASVPSNVQPQAGVYTKEALRELQKNTRTLASSRP 118

Query: 287 ---SRPRHPPLFILKGLVKP-ESAKDQDND-KEELLEDGLAILGIDQIDVLDQAAINAIR 451
              S+P   P+ +LKGL+KP E   D   + KE   ED  A        + DQA INAIR
Sbjct: 119 SSESKPSAEPVIVLKGLLKPAEQVPDSAREAKESSSEDDEAGKDSSGSSIPDQATINAIR 178

Query: 452 AKRERLRKSRAVASDYISLDGGSNHGEAEGLSDEEPEFQGRIALLG-----DKKGVFESV 616
           AKRER+R++   A DYISLD GSN      LSDEE EF GRIA++G      KKGVFE V
Sbjct: 179 AKRERMRQAGVAAPDYISLDAGSNRTAPGELSDEEAEFPGRIAMIGGKLESSKKGVFEEV 238

Query: 617 DE 622
           DE
Sbjct: 239 DE 240


>ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
            sativus]
          Length = 920

 Score =  704 bits (1818), Expect = 0.0
 Identities = 367/624 (58%), Positives = 457/624 (73%), Gaps = 5/624 (0%)
 Frame = +1

Query: 790  QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGT-GYQSTHSGTIGPVIGGSLGVS 966
            QFRKGLGKR+DD                      Y  T GY S  S +    IGGS+ +S
Sbjct: 298  QFRKGLGKRMDDGSTRVESTSVPVVPSVQPQNLIYPTTIGYSSVPSMSTATSIGGSVSIS 357

Query: 967  RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
            +  + +SISQ+A+IA  AMQ+++ RL+ES+ RT  S+ K +E        ITDLEK+LSA
Sbjct: 358  QGLDGLSISQQAEIAKTAMQESMGRLKESYRRTAMSVLKTDENLSASLLKITDLEKALSA 417

Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
            AG+KF++MQKLRDFVSVICDFL+HK  +++ELE++++KL E+RAS +VERR  D+ DEM 
Sbjct: 418  AGDKFMFMQKLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEMV 477

Query: 1327 EIEAAISAARSVL-KKGDSSXXXXXXXXXXXXXM---KDQSNLPVELDEFGRDKNLQKRL 1494
            EIE A+ AA S+L KKG S+             +   ++Q+NLP +LDEFGRD NLQKR+
Sbjct: 478  EIETAVKAAISILNKKGSSNEMVTAATSAAQAAIALSREQANLPTKLDEFGRDLNLQKRM 537

Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
            D+              D +++ S+  D  + +V               Y+ NRD  LQ A
Sbjct: 538  DMKRRAEARKRRRSQYDSKRLASMEVDG-HQKVEGESSTDESDSDSAAYQSNRDLLLQTA 596

Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
            E++FSDA+EE+SQLSVVK+RFE WK+ YS +YRDAYMSLS+P+IF+PYVRLELLKWDPL+
Sbjct: 597  EQIFSDAAEEFSQLSVVKQRFEAWKRDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPLH 656

Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
            E  DF DM WHSLLF+YG+P+DGSDF  +D D NLVP LVEK+ALPILHH+IAHCWD+LS
Sbjct: 657  ESADFFDMNWHSLLFNYGMPEDGSDFAPNDADANLVPELVEKVALPILHHEIAHCWDMLS 716

Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
            TRET+NA +AT L+ NYVP SSEAL ELL  I TR + AI  LTVPTW  L  KAVPNAA
Sbjct: 717  TRETRNAAFATSLITNYVPPSSEALTELLVVIRTRLSGAIEDLTVPTWNSLVTKAVPNAA 776

Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
            R+AAY+FGMS+RL+RNICLWK+I+ LP LEKLAL+ELL GK+LPHVRS+ +NIHDA+TRT
Sbjct: 777  RIAAYRFGMSVRLMRNICLWKEIIALPILEKLALEELLYGKVLPHVRSITANIHDAVTRT 836

Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
            ERIIAS++GVW G G +G RS KLQ LVDYVL LG+TLEKKH+SG++ESETSGLARRLKK
Sbjct: 837  ERIIASLAGVWTGSGIIGDRSHKLQPLVDYVLLLGRTLEKKHISGIAESETSGLARRLKK 896

Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
            MLVELNEYD AR +A+ F LKEAL
Sbjct: 897  MLVELNEYDNARDIAKTFHLKEAL 920



 Score =  140 bits (354), Expect = 2e-30
 Identities = 97/214 (45%), Positives = 123/214 (57%), Gaps = 34/214 (15%)
 Frame = +2

Query: 83  LSFA-DEEEDVTRKPTSSSSKLNTRKPSS-------SSHRLTTPKT--------TSSFVT 214
           LSFA DEE D   +P+SS S  +++KPSS       S+H++T  K         ++S  +
Sbjct: 61  LSFASDEENDAPLRPSSSKSS-SSKKPSSARLAKPSSTHKITALKDRIAHSSSISASVPS 119

Query: 215 NVQPQTGQYTKEKLLELEKNTPTL--------SRPRHPPLFILKGLVKP-----ESAKDQ 355
           NVQPQ G YTKE L EL+KNT TL        S+P   P+ +LKGL+KP     +SA++ 
Sbjct: 120 NVQPQAGVYTKEALRELQKNTRTLASSRPSSESKPSAEPVIVLKGLLKPAEQVPDSAREA 179

Query: 356 DNDKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEA 535
                E  +D           + DQA INAIRAKRER+R++   A DYISLD GSN    
Sbjct: 180 KESSSE--DDEAGRKDSSGSSIPDQATINAIRAKRERMRQAGVAAPDYISLDAGSNRTAP 237

Query: 536 EGLSDEEPEFQGRIALLG-----DKKGVFESVDE 622
             LSDEE EF GRIA++G      KKGVFE VDE
Sbjct: 238 GELSDEEAEFPGRIAMIGGKLESSKKGVFEEVDE 271


>ref|XP_002278714.2| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Vitis
            vinifera]
          Length = 913

 Score =  685 bits (1768), Expect = 0.0
 Identities = 351/624 (56%), Positives = 450/624 (72%), Gaps = 5/624 (0%)
 Frame = +1

Query: 790  QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQSTHSGTIGPV-IGGSLGVS 966
            QFRKGLGKR+DD                      Y      ++  G   P+ IGG++G  
Sbjct: 291  QFRKGLGKRMDDGSSRVVSSSVPVVQKVQQQKFMYSSVTAYTSVPGVSAPLNIGGAVGPL 350

Query: 967  RSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSA 1146
               + MS+SQ+A++A +A+ +N++RL+ESHGRT SS+ + +E        IT LEKSL+A
Sbjct: 351  PGFDAMSLSQQAELAKKALHENLRRLKESHGRTMSSLTRTDENLSSSLSNITTLEKSLTA 410

Query: 1147 AGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMN 1326
            AGEKFI+MQ LRDFVSVICDFL+HK  +++ELE++++KL E+RASAI+ERR  D+ DEM 
Sbjct: 411  AGEKFIFMQXLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASAILERRAADN-DEMM 469

Query: 1327 EIEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQKRL 1494
            EI+A++ AA SV  K  S+                 M++Q+NLPV+LDE+GRD NLQK +
Sbjct: 470  EIQASVDAAMSVFTKSGSNEAMVAAARTAAQAASAAMREQTNLPVKLDEYGRDINLQKCM 529

Query: 1495 DVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVA 1674
            D               D +++  + +++++ ++               Y+ NRD  LQ A
Sbjct: 530  DKNRRSEARQRKRDRWDAKRMTFLENESSHQKIEGESSTDESDSETTAYQSNRDLLLQTA 589

Query: 1675 EELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLN 1854
            E++F DA+EEYSQLS VKER E+WK+ YS SYRDAYMSLSVP+IF+PYVRLELLKWDPL 
Sbjct: 590  EQIFGDAAEEYSQLSAVKERIERWKKQYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPLY 649

Query: 1855 EDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILS 2034
            E+ DF+DM+WHSLLF+YG+ +DG+DF+ DD D NLVP LVE++ALPILHH++AHCWDI S
Sbjct: 650  EEADFDDMKWHSLLFNYGLSEDGNDFSPDDADANLVPELVERVALPILHHELAHCWDIFS 709

Query: 2035 TRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAA 2214
            TRETKNAV AT+LVI Y+PASSEAL ELLA +H R   A+    VP W  L +KAVPNAA
Sbjct: 710  TRETKNAVSATNLVIRYIPASSEALGELLAVVHKRLYKALTNFMVPPWNILVMKAVPNAA 769

Query: 2215 RVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRT 2394
            RVAAY+FGMSIRL+RNICLWKDIL LP LEKL LD+LL G++LPH+ ++ S++HDAITRT
Sbjct: 770  RVAAYRFGMSIRLMRNICLWKDILALPVLEKLVLDQLLSGQVLPHIENIASDVHDAITRT 829

Query: 2395 ERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKK 2574
            ERII+S+SGVWAGP   G RS KLQ LVDYVL LGK LEK+H+ GV+ES+TS LARRLK+
Sbjct: 830  ERIISSLSGVWAGPSVTGERSNKLQPLVDYVLRLGKRLEKRHLPGVTESDTSRLARRLKR 889

Query: 2575 MLVELNEYDRARALARGFQLKEAL 2646
            MLVELNEYD+AR ++R F LKEAL
Sbjct: 890  MLVELNEYDKARDISRTFHLKEAL 913



 Score =  174 bits (442), Expect = 1e-40
 Identities = 110/212 (51%), Positives = 139/212 (65%), Gaps = 32/212 (15%)
 Frame = +2

Query: 83  LSFADEEEDVT------------RKPTSSSSKLNTRKPSSSSHRLTTPK-----TTSSFV 211
           LSFAD+EE+ +             +P+ +SS+  T+  SSSSH++TT K     +++S  
Sbjct: 54  LSFADDEENESPSRSSSRSTQPPSRPSKTSSRF-TKLSSSSSHKITTTKDRLTPSSASLP 112

Query: 212 TNVQPQTGQYTKEKLLELEKNTPTLS---------RPRHPPLFILKGLVKPESA-KDQDN 361
           +NVQPQ G YTKE L EL+KNT TL+         +P   P+ +LKGLVKP SA +D   
Sbjct: 113 SNVQPQAGTYTKEALRELQKNTRTLASSRPASSEPKPSLEPVIVLKGLVKPISAAEDAVI 172

Query: 362 DKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEAEG 541
           D+E + E+  +     +  + DQA INAIRAKRERLR+SRA A DYISLDGGSNHG AEG
Sbjct: 173 DEENVEEEPESKDKGGRDSIPDQATINAIRAKRERLRQSRAAAPDYISLDGGSNHGAAEG 232

Query: 542 LSDEEPEFQGRIALLGD-----KKGVFESVDE 622
           LSDEEPEFQGRIA+ G+     KKGVFE VDE
Sbjct: 233 LSDEEPEFQGRIAMFGEKPESGKKGVFEDVDE 264


>ref|XP_002513154.1| gc-rich sequence DNA-binding factor, putative [Ricinus communis]
            gi|223548165|gb|EEF49657.1| gc-rich sequence DNA-binding
            factor, putative [Ricinus communis]
          Length = 885

 Score =  660 bits (1703), Expect = 0.0
 Identities = 347/623 (55%), Positives = 433/623 (69%), Gaps = 4/623 (0%)
 Frame = +1

Query: 790  QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQSTHSGTIGPVIGGSLGVSR 969
            QFRK LGKR+DD                         T     HS  + P IGG+ G + 
Sbjct: 274  QFRKALGKRMDDPSSSTPSLFPTPSTSTIT-------TTNNHRHSHIV-PTIGGAFGPTP 325

Query: 970  SAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSLSAA 1149
              + +S+ Q++ IA +A+  N+ RL+ESH RT SS+ K +E        IT LEKSLSAA
Sbjct: 326  GLDALSVPQQSHIARKALLDNLTRLKESHNRTVSSLTKADENLSASLMNITALEKSLSAA 385

Query: 1150 GEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDEMNE 1329
            GEKFI+MQKLRDFVSVIC+FL+HK  Y++ELE++++ L E RASAI+ERR  D+ DEM E
Sbjct: 386  GEKFIFMQKLRDFVSVICEFLQHKAPYIEELEEQMQTLHEQRASAILERRTADNDDEMME 445

Query: 1330 IEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQKRLD 1497
            ++ A+ AA+ V     S+                 MK+Q NLPV+LDEFGRD N QKRLD
Sbjct: 446  VKTALEAAKKVFSARGSNEAAITAAMNAAQDASASMKEQINLPVKLDEFGRDINQQKRLD 505

Query: 1498 VMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQVAE 1677
            +                +++ SV  D +  +V               Y+ NRD  LQ A+
Sbjct: 506  MKRRAEARQRRKAQ---KKLSSVEVDGSNQKVEGESSTDESDSESAAYQSNRDLLLQTAD 562

Query: 1678 ELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDPLNE 1857
            ++F DASEEY QLSVVK+RFE WK+ YS SYRDAYMS+S P+IF+PYVRLELLKWDPL+E
Sbjct: 563  QIFGDASEEYCQLSVVKQRFENWKKEYSTSYRDAYMSISAPAIFSPYVRLELLKWDPLHE 622

Query: 1858 DKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDILST 2037
            D  F  M+WHSLL  YG+P+DGSD + +D D NLVP LVEK+A+PILHH+IAHCWD+LST
Sbjct: 623  DAGFFHMKWHSLLSDYGLPQDGSDLSPEDADANLVPELVEKVAIPILHHEIAHCWDMLST 682

Query: 2038 RETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPNAAR 2217
            RETKNAV+AT+LV +YVPASSEAL ELL  I TR  DA+  + VPTW+P+E+KAVP AA+
Sbjct: 683  RETKNAVFATNLVTDYVPASSEALAELLLAIRTRLTDAVVSIMVPTWSPIELKAVPRAAQ 742

Query: 2218 VAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAITRTE 2397
            +AAY+FGMS+RL++NICLWKDIL LP LEKLALD+LL  K+LPH++SV SN+HDA+TRTE
Sbjct: 743  IAAYRFGMSVRLMKNICLWKDILSLPVLEKLALDDLLCRKVLPHLQSVASNVHDAVTRTE 802

Query: 2398 RIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRLKKM 2577
            RIIAS+SGVWAG      RS KLQ LVD V++LGK L+ KH  G SE E SGLARRLKKM
Sbjct: 803  RIIASLSGVWAGTSVTASRSHKLQPLVDCVMSLGKRLKDKHPLGASEIEVSGLARRLKKM 862

Query: 2578 LVELNEYDRARALARGFQLKEAL 2646
            LVELN+YD+AR +AR F L+EAL
Sbjct: 863  LVELNDYDKAREIARMFSLREAL 885



 Score =  125 bits (315), Expect = 5e-26
 Identities = 87/199 (43%), Positives = 111/199 (55%), Gaps = 28/199 (14%)
 Frame = +2

Query: 83  LSFADEEEDVTRKPTSSSSKLNTRKPSSSSHRLTTPK-------TTSSFVTNVQ------ 223
           LSFAD+EE+    P  S  K +  K   SSH+LT PK       TTS+  TN        
Sbjct: 44  LSFADDEEEDEETPRPSKQKPSKTK---SSHKLTAPKDRLSSSSTTSTTSTNTNSNNVLL 100

Query: 224 PQTGQYTKEKLLELEKNTPTLSRPRHPP----------LFILKGLVKPE-----SAKDQD 358
           PQ G YTKE LLEL+K T TL++P   P            ILKGL+KP      + +D D
Sbjct: 101 PQAGTYTKEALLELQKKTRTLAKPSSKPPPPPPSSSEPKIILKGLLKPTLPQTLNQQDAD 160

Query: 359 NDKEELLEDGLAILGIDQIDVLDQAAINAIRAKRERLRKSRAVASDYISLDGGSNHGEAE 538
             ++E++ D       D   + D+  I  IRAKRERLR+SRA A DYISLDGG+    ++
Sbjct: 161 PPQDEIIIDE------DYSLIPDEDTIKKIRAKRERLRQSRATAPDYISLDGGA--ATSD 212

Query: 539 GLSDEEPEFQGRIALLGDK 595
             SDEEPEF+ RIA++G K
Sbjct: 213 AFSDEEPEFRNRIAMIGKK 231


>ref|XP_002873370.1| increased level of polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
            gi|297319207|gb|EFH49629.1| increased level of
            polyploidy1-1D [Arabidopsis lyrata subsp. lyrata]
          Length = 908

 Score =  625 bits (1611), Expect = e-176
 Identities = 327/626 (52%), Positives = 428/626 (68%), Gaps = 7/626 (1%)
 Frame = +1

Query: 790  QFRKGLGKRIDDXXXXXXXXXXXXXXXXXXXXXXYHGTGYQST-HSGTIGPVIG--GSLG 960
            QF+KG+GKR+D+                       H      T H+GT  P I    ++G
Sbjct: 283  QFKKGIGKRMDEGSHRSVTSNGIGVPLHSNQQSLPHQQPQMYTYHAGTPMPNISVAPTIG 342

Query: 961  VSRSAEVMSISQKAQIATQAMQQNIKRLQESHGRTTSSIDKVEEXXXXXXXXITDLEKSL 1140
             + S + + +SQ+A +A +A+Q N+K+L+ESH +T SS+ K +E        IT LE SL
Sbjct: 343  PATSVDTLPMSQQAALAKKALQDNVKKLKESHAKTLSSLTKTDENLTASLMSITALESSL 402

Query: 1141 SAAGEKFIYMQKLRDFVSVICDFLKHKKSYLDELEDEVRKLQEDRASAIVERRKNDSTDE 1320
            SAAG+K+++MQKLRDF+SVICDF+++K S ++E+ED++++L E  A +I+ERR  D+ DE
Sbjct: 403  SAAGDKYVFMQKLRDFISVICDFMQNKGSLIEEIEDQMKELNEKHALSILERRIADNNDE 462

Query: 1321 MNEIEAAISAARSVLKKGDSSXXXXXXXXXXXXX----MKDQSNLPVELDEFGRDKNLQK 1488
            M E+ AA+ AA +VL K  SS                 ++ Q N PV+LDEFGRD+NLQK
Sbjct: 463  MIELGAAVKAAMTVLNKQGSSTSVIAAATSAALAASASIRQQMNQPVKLDEFGRDENLQK 522

Query: 1489 RLDVMXXXXXXXXXXXXXDLRQVQSVGDDNAYHRVXXXXXXXXXXXXXXXYRDNRDKYLQ 1668
            R +V              + ++  ++  + +  ++               Y++ RD  LQ
Sbjct: 523  RREVEQRAAARQKRRARFENKRASAMEIEGSSLKIEGESSTDESDTETSAYKETRDSLLQ 582

Query: 1669 VAEELFSDASEEYSQLSVVKERFEKWKQLYSPSYRDAYMSLSVPSIFAPYVRLELLKWDP 1848
             A+++FSDASEEYSQLS VK RFE+WK+ YS +YRDAYMSL+VPSIF+PYVRLELLKWDP
Sbjct: 583  CADKVFSDASEEYSQLSRVKARFERWKRDYSSTYRDAYMSLTVPSIFSPYVRLELLKWDP 642

Query: 1849 LNEDKDFNDMQWHSLLFHYGVPKDGSDFNADDPDGNLVPGLVEKIALPILHHQIAHCWDI 2028
            L++D DF DM+WH LLF YG P+DG DF  DD D NLVP LVEK+A+PILHHQI  CWDI
Sbjct: 643  LHQDVDFFDMKWHGLLFDYGKPEDGDDFAPDDTDANLVPELVEKVAIPILHHQIVRCWDI 702

Query: 2029 LSTRETKNAVYATDLVINYVPASSEALRELLAEIHTRFADAIAKLTVPTWTPLEIKAVPN 2208
            LSTRET+NAV AT LV NYV ASSEAL EL A I  R  +AIA ++VPTW PL +KAVPN
Sbjct: 703  LSTRETRNAVAATSLVTNYVSASSEALAELFAAIRARLVEAIAAISVPTWDPLVLKAVPN 762

Query: 2209 AARVAAYQFGMSIRLLRNICLWKDILRLPTLEKLALDELLGGKILPHVRSVISNIHDAIT 2388
            A +VAAY+FG S+RL+RNIC+WKDIL L  LE LAL +LL GK+LPHVRS+ SNIHDA+T
Sbjct: 763  APQVAAYRFGTSVRLMRNICMWKDILALSVLENLALSDLLFGKVLPHVRSIASNIHDAVT 822

Query: 2389 RTERIIASMSGVWAGPGAMGVRSQKLQALVDYVLTLGKTLEKKHMSGVSESETSGLARRL 2568
            RTERI+AS+SGVW GP      S+ LQ LVD  LTL + LEK+  SG+ ++ET+GLARRL
Sbjct: 823  RTERIVASLSGVWTGPSVTRTHSRPLQPLVDCTLTLRRILEKRLASGLDDAETTGLARRL 882

Query: 2569 KKMLVELNEYDRARALARGFQLKEAL 2646
            K++LVEL+E+D AR + R F LKEA+
Sbjct: 883  KRILVELHEHDHAREIVRTFNLKEAV 908



 Score =  119 bits (299), Expect = 4e-24
 Identities = 91/208 (43%), Positives = 120/208 (57%), Gaps = 28/208 (13%)
 Frame = +2

Query: 83  LSFADEEED-------VTRKPTSSSSKLNTR---KPSSSSHRLTTPKTTSSFVTNVQPQT 232
           LSFAD+EE+       VT KP +   ++ +      S SSHR ++ K      +NV PQ 
Sbjct: 53  LSFADDEEEEEDGAPRVTIKPKNGRDRVKSSFRLGVSGSSHRHSSTKEHRPASSNVLPQA 112

Query: 233 GQYTKEKLLELEKNTPTL--SRP--RHPPLFILKGLVKPESAKDQDNDKEELLEDGLAIL 400
           G Y+KE LLEL+KNT TL  SRP     P  +LKGL+KP    +Q + K+ + +  ++ L
Sbjct: 113 GSYSKEALLELQKNTRTLPYSRPSSNSEPKVVLKGLIKPPHQHEQQSLKDVVKQ--VSDL 170

Query: 401 GIDQID--------VLDQAAINAIRAKRERLRKSR-AVASDYISLDGG-SNHGEAEGLSD 550
             D+            DQAAI  IRAK+ER+R+SR A A DYISLDGG +NH   EG+SD
Sbjct: 171 DFDEEGEKEQPEDAFADQAAI--IRAKKERMRQSRSAPAPDYISLDGGTANHSAVEGVSD 228

Query: 551 EEPEFQGRIA----LLGDKKGVFESVDE 622
           E+ +FQG         GDKKGVF+  DE
Sbjct: 229 EDADFQGIFVGARPHKGDKKGVFDFGDE 256


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