BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011283
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99040.1| succinate dehydrogenase [ubiquinone] flavoprotein...   105   4e-21
gb|AEL99041.1| succinate dehydrogenase [ubiquinone] flavoprotein...   103   1e-20
ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquino...   102   4e-20
gb|ADZ75464.1| succinate dehydrogenase [Litchi chinensis]             102   4e-20
ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>gb|AEL99040.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1,
           partial [Silene latifolia]
          Length = 262

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/92 (58%), Positives = 59/92 (64%)
 Frame = +2

Query: 53  MWRSVSRQITSSLRKKPFVSRFFSSGWNGGGYTIVDHTYDXXXXXXXXXXXXXXXXXSEH 232
           MWR  +R +         +SRFFSS  + GGYT+VDH YD                 SEH
Sbjct: 1   MWRCAARTVRHRSSSTSPISRFFSSN-SSGGYTVVDHAYDAVVVGAGGAGLRAAIGLSEH 59

Query: 233 GFNTACITKLFPTRSHTVAAQGGINAALGNMT 328
           GFNTACITKLFPTRSHTVAAQGGINAALGNMT
Sbjct: 60  GFNTACITKLFPTRSHTVAAQGGINAALGNMT 91


>gb|AEL99041.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1,
           partial [Silene latifolia]
          Length = 262

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/92 (57%), Positives = 59/92 (64%)
 Frame = +2

Query: 53  MWRSVSRQITSSLRKKPFVSRFFSSGWNGGGYTIVDHTYDXXXXXXXXXXXXXXXXXSEH 232
           MWR  +R +         +SRFFSS  + GGYT+VDH YD                 SEH
Sbjct: 1   MWRCAARTVRHRSSSTSPISRFFSSN-SSGGYTVVDHAYDAVVVGAGGAGLRAAIGLSEH 59

Query: 233 GFNTACITKLFPTRSHTVAAQGGINAALGNMT 328
           GF+TACITKLFPTRSHTVAAQGGINAALGNMT
Sbjct: 60  GFDTACITKLFPTRSHTVAAQGGINAALGNMT 91


>ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/100 (57%), Positives = 63/100 (63%), Gaps = 8/100 (8%)
 Frame = +2

Query: 53  MWRSVSRQI--------TSSLRKKPFVSRFFSSGWNGGGYTIVDHTYDXXXXXXXXXXXX 208
           MWR ++R +        TS+      +SRFFSSG N   YT+VDHTYD            
Sbjct: 1   MWRCIARGLRGPASTRSTSNHSLGSQLSRFFSSGANSS-YTVVDHTYDAVVVGAGGAGLR 59

Query: 209 XXXXXSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 328
                SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT
Sbjct: 60  AAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 99


>gb|ADZ75464.1| succinate dehydrogenase [Litchi chinensis]
          Length = 628

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/98 (57%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
 Frame = +2

Query: 53  MWRSVSRQITSSLRK------KPFVSRFFSSGWNGGGYTIVDHTYDXXXXXXXXXXXXXX 214
           MWR VSR +  S R       +  + R FS+  + GGYT+VDHTYD              
Sbjct: 1   MWRCVSRGLGFSKRSISNDSIRSHIPRLFSTD-STGGYTVVDHTYDAVVVGAGGAGLRAA 59

Query: 215 XXXSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 328
              SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT
Sbjct: 60  IGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 97


>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/102 (54%), Positives = 64/102 (62%), Gaps = 10/102 (9%)
 Frame = +2

Query: 53  MWRSVSRQI--------TSSLRKKPFVSRFFSSGWNGG--GYTIVDHTYDXXXXXXXXXX 202
           MWR V+R +        +S+   +  +SRFFS+   GG   YT+VDHTYD          
Sbjct: 1   MWRCVARGLRLPCSTKRSSNDSFRSHISRFFSTDTTGGRSSYTVVDHTYDAVVVGAGGAG 60

Query: 203 XXXXXXXSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 328
                  SEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT
Sbjct: 61  LRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 102