BLASTX nr result

ID: Coptis24_contig00011282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011282
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515459.1| conserved hypothetical protein [Ricinus comm...   107   6e-21
emb|CBI21097.3| unnamed protein product [Vitis vinifera]               98   5e-18
ref|XP_003603323.1| hypothetical protein MTR_3g106340 [Medicago ...    97   1e-17
ref|XP_002309657.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-17
ref|XP_003542130.1| PREDICTED: uncharacterized protein LOC100810...    94   1e-16

>ref|XP_002515459.1| conserved hypothetical protein [Ricinus communis]
           gi|223545403|gb|EEF46908.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 278

 Score =  107 bits (268), Expect = 6e-21
 Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 7/150 (4%)
 Frame = +2

Query: 377 TRASPTTPLSWSAGGTSNS---AGDGYEESSVRPSYS-RSKVNS---SSEINNKRSRKKK 535
           TR SPTTPLSWS GG S S     DG+EE+S R S + RSKV +   S+  N KRS++KK
Sbjct: 83  TRCSPTTPLSWSGGGGSASPSATADGFEETSRRSSPAVRSKVTAETASTTTNTKRSKRKK 142

Query: 536 TFAELKEEEGFLQNEAVHLKRALASEHVLYGKEKVRNESLKRLKLDWQLQSALQPGTSTD 715
           TFAEL+ EEG L  E +HLK+ LAS +  + +++ RNE+LKR+KLD  LQ A    ++ D
Sbjct: 143 TFAELRIEEGLLMKEKMHLKKELASLNATFNEQRSRNENLKRIKLDLNLQYAENSSSARD 202

Query: 716 IFMKPTFNQSYHAGQVRIDRDPRVLPPSGK 805
              +   ++S+       ++   +LP   K
Sbjct: 203 EMEEAICSRSHQREPSSSNQIISILPMYAK 232


>emb|CBI21097.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 9/113 (7%)
 Frame = +2

Query: 371 ELTRASPTTPLSWSAGGTSNSAGDG--YEE----SSVRPSYSRSKVNSSSEINN---KRS 523
           E TR SPTTPLSWS G + ++A D   +E+    SS+R + +RSKV + SE  N   KRS
Sbjct: 48  EPTRRSPTTPLSWSGGASPSAAADADAFEDCSRSSSIRFAAARSKVTALSETTNTNTKRS 107

Query: 524 RKKKTFAELKEEEGFLQNEAVHLKRALASEHVLYGKEKVRNESLKRLKLDWQL 682
           R+KKTFAELKEEE  L  E  +LK+ LA+  V + +++  NESLKR+K+D+ L
Sbjct: 108 RRKKTFAELKEEEILLLKERTYLKKELATLRVTFKEQRATNESLKRMKIDFHL 160


>ref|XP_003603323.1| hypothetical protein MTR_3g106340 [Medicago truncatula]
           gi|355492371|gb|AES73574.1| hypothetical protein
           MTR_3g106340 [Medicago truncatula]
          Length = 245

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
 Frame = +2

Query: 377 TRASPTTPLSWSAGGTSNSAGDGYEESSVRPSYSRSKVNSSS-----EINNKRSRKKKTF 541
           TR SPTTPLSWS G + +   +GYE+SS     +RSK  ++S       + KR ++KK+F
Sbjct: 64  TRCSPTTPLSWSGGASPSVTAEGYEDSSRYNHAARSKATATSGYTSNSASTKRCKRKKSF 123

Query: 542 AELKEEEGFLQNEAVHLKRALASEHVLYGKEKVRNESLKRLKLDWQLQSALQPGTSTDIF 721
           AELKEEE  L  E +HL+R +A+ +  +   +  NESLKR+KL +  +S  +P  ST + 
Sbjct: 124 AELKEEETTLLKERIHLEREIATRNANFEVMRTTNESLKRMKLGFGSKSHSKPSCSTSVE 183

Query: 722 MKPTFNQSYH 751
           ++ T     H
Sbjct: 184 LRGTLAGQPH 193


>ref|XP_002309657.1| predicted protein [Populus trichocarpa] gi|222855633|gb|EEE93180.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 16/130 (12%)
 Frame = +2

Query: 377 TRASPTTPLSWSAGGTSNSA----GDGYEESSVR-------PSYSRSKVNSSSEINN--- 514
           TR SPTTPLSWS GG   ++    GDG+EE+S R       P   RSK     E  +   
Sbjct: 81  TRCSPTTPLSWSGGGDGGASPSGTGDGFEETSRRHLSSSPPPPGVRSKGAGIGETTSNIV 140

Query: 515 KRSRKKKTFAELKEEEGFLQNEAVHLKRALASEHVLYGKEKVRNESLKRLKLDWQLQ--S 688
           KRSRKKKTF+ELKEEE  L  E V+LK+ +++    + +E+ RNE+LKR+K+D  L    
Sbjct: 141 KRSRKKKTFSELKEEETQLVKEGVYLKKEISTVRATFKEERARNENLKRIKIDLNLHYGD 200

Query: 689 ALQPGTSTDI 718
            L+  TS  I
Sbjct: 201 ELEASTSNGI 210


>ref|XP_003542130.1| PREDICTED: uncharacterized protein LOC100810953 [Glycine max]
          Length = 238

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 61/122 (50%), Positives = 81/122 (66%), Gaps = 5/122 (4%)
 Frame = +2

Query: 368 SELTRASPTTPLSWSAGGTSNSAG--DGYEESSVRPSY-SRSKV-NSSSEINNKRSRKKK 535
           +E TRASPTTPLSWS G TS S G  DGYEES  +PS  SRSKV N S     +++R+KK
Sbjct: 52  AESTRASPTTPLSWS-GATSASGGNLDGYEES--KPSQTSRSKVANPSETATTRKTRRKK 108

Query: 536 TFAELKEEEGFLQNEAVHLKRALASEHVLYGKEKVRNESLKRLKLDWQ-LQSALQPGTST 712
           T  ELKEEE  L  E  +L++ LAS  +   K +  NES+KRLKLD++  Q++    T++
Sbjct: 109 TLTELKEEEDLLLKERRNLEKELASLRLTIQKHRATNESIKRLKLDFESRQNSSAAATAS 168

Query: 713 DI 718
           ++
Sbjct: 169 EV 170


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