BLASTX nr result

ID: Coptis24_contig00011275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011275
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis ...   150   2e-34
ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp....   150   2e-34
ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis tha...   150   2e-34
gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|221363...   150   2e-34
ref|XP_003546608.1| PREDICTED: transmembrane 9 superfamily membe...   149   4e-34

>ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|10176814|dbj|BAB10022.1| endosomal protein-like
           [Arabidopsis thaliana] gi|332006552|gb|AED93935.1|
           endomembrane family protein 70 [Arabidopsis thaliana]
          Length = 658

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = -1

Query: 595 WKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 416
           WKSFFASGSVAIYIF+YSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS
Sbjct: 584 WKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 643

Query: 415 SFWFVHYLFSSVKLD 371
           SFWFVHYLFSSVKLD
Sbjct: 644 SFWFVHYLFSSVKLD 658


>ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314243|gb|EFH44666.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 630

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = -1

Query: 595 WKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 416
           WKSFFASGSVAIYIF+YSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS
Sbjct: 556 WKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 615

Query: 415 SFWFVHYLFSSVKLD 371
           SFWFVHYLFSSVKLD
Sbjct: 616 SFWFVHYLFSSVKLD 630


>ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|332006551|gb|AED93934.1| endomembrane family protein
           70 [Arabidopsis thaliana]
          Length = 630

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = -1

Query: 595 WKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 416
           WKSFFASGSVAIYIF+YSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS
Sbjct: 556 WKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 615

Query: 415 SFWFVHYLFSSVKLD 371
           SFWFVHYLFSSVKLD
Sbjct: 616 SFWFVHYLFSSVKLD 630


>gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|22136376|gb|AAM91266.1|
           putative protein [Arabidopsis thaliana]
          Length = 425

 Score =  150 bits (379), Expect = 2e-34
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = -1

Query: 595 WKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 416
           WKSFFASGSVAIYIF+YSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS
Sbjct: 351 WKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 410

Query: 415 SFWFVHYLFSSVKLD 371
           SFWFVHYLFSSVKLD
Sbjct: 411 SFWFVHYLFSSVKLD 425


>ref|XP_003546608.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 660

 Score =  149 bits (376), Expect = 4e-34
 Identities = 72/75 (96%), Positives = 75/75 (100%)
 Frame = -1

Query: 595 WKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFLS 416
           WKSFFASGSVAIYIFLYS+NYLVFDLKSLSGPVSATLYLGYSLFMVLAIML+TGT+GFLS
Sbjct: 586 WKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLSTGTIGFLS 645

Query: 415 SFWFVHYLFSSVKLD 371
           SFWFVHYLFSSVKLD
Sbjct: 646 SFWFVHYLFSSVKLD 660


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