BLASTX nr result

ID: Coptis24_contig00011274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011274
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   354   1e-95
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   353   1e-95
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   353   1e-95
ref|XP_003593890.1| ABC transporter C family member [Medicago tr...   351   6e-95
ref|XP_002317351.1| multidrug resistance protein ABC transporter...   351   6e-95

>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534049|gb|EEF35768.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1569

 Score =  354 bits (908), Expect = 1e-95
 Identities = 184/225 (81%), Positives = 193/225 (85%), Gaps = 1/225 (0%)
 Frame = -3

Query: 673  IQTIVINKMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQDVRNDELSW 494
            IQT VI++MQK SKEGLQRTDKRIGLMNEILAAMDTVKCYAWE SFQ KVQ+VR+DELSW
Sbjct: 399  IQTFVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWENSFQGKVQNVRDDELSW 458

Query: 493  FRKAQLLGALNSFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLALFAVLRFPLFMLP 314
            FRKA LLGA N FILNSIPVVVTVISFGMFTLLGGDLTPARAFTSL+LFAVLRFPLFMLP
Sbjct: 459  FRKASLLGACNGFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 518

Query: 313  NLITQVVNANVSXXXXXXXXXXXXXXXLPNPPLDPTSPAISIKNGYFSWDSKAEQPTLSK 134
            N+ITQ VNANVS               LPNPPLDP  PAISIKNGYFSWDSKAE PTLS 
Sbjct: 519  NIITQAVNANVSLKRLEELLLAEERILLPNPPLDPVQPAISIKNGYFSWDSKAEMPTLSN 578

Query: 133  INLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPMRDATT-VIRG 2
            IN+DIP GSLVA+VGSTGEGKTSLISAMLGELP M D T+ VIRG
Sbjct: 579  INVDIPTGSLVAIVGSTGEGKTSLISAMLGELPAMSDTTSAVIRG 623


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score =  353 bits (907), Expect = 1e-95
 Identities = 179/224 (79%), Positives = 193/224 (86%)
 Frame = -3

Query: 673  IQTIVINKMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQDVRNDELSW 494
            IQT+VI++MQK SKEGLQRTDKRIGLMNEILAAMDTVKCYAWE SFQSKVQ VRN+ELSW
Sbjct: 449  IQTVVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWENSFQSKVQSVRNEELSW 508

Query: 493  FRKAQLLGALNSFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLALFAVLRFPLFMLP 314
            FRKA  LGA N F+LNSIPVVV VISFGMFTLLGGDLTPARAFTSL+LFAVLRFPLFMLP
Sbjct: 509  FRKASFLGAFNVFMLNSIPVVVIVISFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 568

Query: 313  NLITQVVNANVSXXXXXXXXXXXXXXXLPNPPLDPTSPAISIKNGYFSWDSKAEQPTLSK 134
            N+ITQ VNANVS               LPNPPL+P  PAISIKNGYFSWDSKA++PTLS 
Sbjct: 569  NIITQAVNANVSLKRLEELFLAEERILLPNPPLEPGLPAISIKNGYFSWDSKADRPTLSN 628

Query: 133  INLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPMRDATTVIRG 2
            +NLDIPVG LVA+VG TGEGKTSL+SAMLGELPPM DA+ VIRG
Sbjct: 629  VNLDIPVGGLVAIVGGTGEGKTSLVSAMLGELPPMSDASAVIRG 672


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score =  353 bits (907), Expect = 1e-95
 Identities = 179/224 (79%), Positives = 193/224 (86%)
 Frame = -3

Query: 673  IQTIVINKMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQDVRNDELSW 494
            IQT+VI++MQK SKEGLQRTDKRIGLMNEILAAMDTVKCYAWE SFQSKVQ VRN+ELSW
Sbjct: 456  IQTVVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWENSFQSKVQSVRNEELSW 515

Query: 493  FRKAQLLGALNSFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLALFAVLRFPLFMLP 314
            FRKA  LGA N F+LNSIPVVV VISFGMFTLLGGDLTPARAFTSL+LFAVLRFPLFMLP
Sbjct: 516  FRKASFLGAFNVFMLNSIPVVVIVISFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 575

Query: 313  NLITQVVNANVSXXXXXXXXXXXXXXXLPNPPLDPTSPAISIKNGYFSWDSKAEQPTLSK 134
            N+ITQ VNANVS               LPNPPL+P  PAISIKNGYFSWDSKA++PTLS 
Sbjct: 576  NIITQAVNANVSLKRLEELFLAEERILLPNPPLEPGLPAISIKNGYFSWDSKADRPTLSN 635

Query: 133  INLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPMRDATTVIRG 2
            +NLDIPVG LVA+VG TGEGKTSL+SAMLGELPPM DA+ VIRG
Sbjct: 636  VNLDIPVGGLVAIVGGTGEGKTSLVSAMLGELPPMSDASAVIRG 679


>ref|XP_003593890.1| ABC transporter C family member [Medicago truncatula]
            gi|355482938|gb|AES64141.1| ABC transporter C family
            member [Medicago truncatula]
          Length = 1712

 Score =  351 bits (901), Expect = 6e-95
 Identities = 178/224 (79%), Positives = 196/224 (87%)
 Frame = -3

Query: 673  IQTIVINKMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQDVRNDELSW 494
            + T++I++MQK SKEGLQRTDKRIGLMNEILAAMDTVKCYAWE SFQS+V +VRNDELSW
Sbjct: 549  LNTVIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSW 608

Query: 493  FRKAQLLGALNSFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLALFAVLRFPLFMLP 314
            FRKA LLGA NSFILNSIPV VTVISFG+FTLLGGDLTPARAFTSL+LFAVLRFPLFMLP
Sbjct: 609  FRKASLLGACNSFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLP 668

Query: 313  NLITQVVNANVSXXXXXXXXXXXXXXXLPNPPLDPTSPAISIKNGYFSWDSKAEQPTLSK 134
            N+ITQVVNANVS               LPNPPL+P  PAISI+NGYFSWD+KAE+ TLS 
Sbjct: 669  NIITQVVNANVSLKRLEELLLAEERILLPNPPLEPGLPAISIRNGYFSWDAKAERATLSN 728

Query: 133  INLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPMRDATTVIRG 2
            INLDIPVGSLVAVVGSTGEGKTSL+SAMLGELPP+ D+T V+RG
Sbjct: 729  INLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPPIADSTVVLRG 772


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score =  351 bits (901), Expect = 6e-95
 Identities = 180/224 (80%), Positives = 195/224 (87%)
 Frame = -3

Query: 673  IQTIVINKMQKWSKEGLQRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQDVRNDELSW 494
            IQT VI++MQK SKEGLQRTDKRIGLMNEILAAMDTVKCYAWE SFQ+KVQ VR+DELSW
Sbjct: 449  IQTFVISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQAKVQGVRDDELSW 508

Query: 493  FRKAQLLGALNSFILNSIPVVVTVISFGMFTLLGGDLTPARAFTSLALFAVLRFPLFMLP 314
            FRKA LLGA NSFILNSIPV+VTVISFGM+TLLGG+LTPARAFTSL+LFAVLRFPLFMLP
Sbjct: 509  FRKASLLGACNSFILNSIPVMVTVISFGMYTLLGGNLTPARAFTSLSLFAVLRFPLFMLP 568

Query: 313  NLITQVVNANVSXXXXXXXXXXXXXXXLPNPPLDPTSPAISIKNGYFSWDSKAEQPTLSK 134
            N+ITQVVNANVS               LPNP LDP  PA+SIKNGYFSWDSKAE+PTLS 
Sbjct: 569  NMITQVVNANVSLKRLEELFLAEERILLPNPLLDPCLPAVSIKNGYFSWDSKAERPTLSN 628

Query: 133  INLDIPVGSLVAVVGSTGEGKTSLISAMLGELPPMRDATTVIRG 2
            INLD+P+GSLVAVVGSTGEGKTSL+SAMLGELP   DA+ VIRG
Sbjct: 629  INLDVPIGSLVAVVGSTGEGKTSLVSAMLGELPATSDASVVIRG 672


Top