BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011272
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   315   1e-83
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   288   4e-82
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   307   2e-81
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        305   8e-81
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   290   1e-80

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  315 bits (807), Expect = 1e-83
 Identities = 154/305 (50%), Positives = 201/305 (65%), Gaps = 1/305 (0%)
 Frame = +1

Query: 13   NCQGLHGQHIQVAWPSPIHYIRPRQNLINS-FWKNLFKTLGTKLHLSTSYHPQTDGQTER 189
            N   LHG         PI  +  R  +  S F++ +FK+   +L  ST+YHPQTDGQTER
Sbjct: 659  NIHKLHGM--------PIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTER 710

Query: 190  TYTCLETYLRCMTGHKPQSWVKWLPLAEGWFNTNYHNSLKMAPFTALYGYSPPHLAILAN 369
               CLE+YLRCMT  +PQ+W  W+ LAE W+NT YH +++M PF ALYGYSPP ++  + 
Sbjct: 711  VNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSV 770

Query: 370  VTHSIAAVDDYLKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFAVGDWVYLKLQPYR 549
                       L+E++ +V+ +K  +  AQ RMK+YAD+ RTER   VGD VYLKLQPYR
Sbjct: 771  PCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYR 830

Query: 550  QTSVALRKNLKLSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPVFHVSQLKPKLGITITP 729
            Q +  +R +LKL  K+YGPF+VL ++G VAY+LQLP  + IHPVFHVSQLK  LG    P
Sbjct: 831  QNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVP 890

Query: 730  VPQLPLVDQEGQFLVEPVAILSRRIVPRNNKAVTQVLVQWSNTVPEDSTWEDWSSIIAHY 909
            +P LP V  +GQ   EPVA+L RR++PRNN AVTQ L+ WSN  P ++TWED S I   +
Sbjct: 891  MPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVF 950

Query: 910  PHFNP 924
            P+F P
Sbjct: 951  PNFQP 955


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  288 bits (737), Expect(2) = 4e-82
 Identities = 138/272 (50%), Positives = 188/272 (69%)
 Frame = +1

Query: 97   NSFWKNLFKTLGTKLHLSTSYHPQTDGQTERTYTCLETYLRCMTGHKPQSWVKWLPLAEG 276
            ++FWK LFK  GT L  S++YHPQTDGQTE     +E YLRC +G KP+ WVKWLPLAE 
Sbjct: 1191 STFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEW 1250

Query: 277  WFNTNYHNSLKMAPFTALYGYSPPHLAILANVTHSIAAVDDYLKERQAMVEVIKDDLYKA 456
            W+NTN H S K++PF ++YGY PP L      T  +  V++ LK R  ++ +++ +L  A
Sbjct: 1251 WYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLA 1310

Query: 457  QERMKFYADKKRTERSFAVGDWVYLKLQPYRQTSVALRKNLKLSAKFYGPFQVLARIGVV 636
            Q+RMK +AD K T RSF +GD VYL+LQPY+Q SV  R+NLKLS +FYGP++VL +IG V
Sbjct: 1311 QDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTV 1370

Query: 637  AYKLQLPIGSKIHPVFHVSQLKPKLGITITPVPQLPLVDQEGQFLVEPVAILSRRIVPRN 816
            AY+L+LP  +KIHPVFHVS LK KLG     V  LP  D++G    EP  IL RR+  + 
Sbjct: 1371 AYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKK 1430

Query: 817  NKAVTQVLVQWSNTVPEDSTWEDWSSIIAHYP 912
            N AVT+VLV+W     ++++W ++S+++  +P
Sbjct: 1431 NHAVTEVLVKWKGLGEDEASWVEYSTLVNEFP 1462



 Score = 43.9 bits (102), Expect(2) = 4e-82
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +2

Query: 2    TASTIAKVFMDNIYKLHGLPQSITLDRD 85
            TAS IA+VF+ NI+KLHGLP SI  DRD
Sbjct: 1159 TASKIAQVFLANIFKLHGLPNSIVTDRD 1186


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  307 bits (787), Expect = 2e-81
 Identities = 149/305 (48%), Positives = 201/305 (65%), Gaps = 1/305 (0%)
 Frame = +1

Query: 13   NCQGLHGQHIQVAWPSPIHYIRPRQNLINS-FWKNLFKTLGTKLHLSTSYHPQTDGQTER 189
            N   LHG         P+  +  R  +  S F++ +FKT   KL  ST++HPQTDGQTER
Sbjct: 1315 NIHKLHGM--------PMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTER 1366

Query: 190  TYTCLETYLRCMTGHKPQSWVKWLPLAEGWFNTNYHNSLKMAPFTALYGYSPPHLAILAN 369
               CLE+YLR MT  +PQ W  WL LAE W+NT YH S++M PF ALYGY PP +   A 
Sbjct: 1367 VNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAI 1426

Query: 370  VTHSIAAVDDYLKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFAVGDWVYLKLQPYR 549
              +        L+++  +++ +K  + +AQ R+KFYADK R+ER+  +GD VYLKLQPYR
Sbjct: 1427 PCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYR 1486

Query: 550  QTSVALRKNLKLSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPVFHVSQLKPKLGITITP 729
            Q ++ +R +LKL +K+YGPF+V+ ++G VAYKLQLP G+ IHPVFHVSQLK  LG    P
Sbjct: 1487 QVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAIP 1546

Query: 730  VPQLPLVDQEGQFLVEPVAILSRRIVPRNNKAVTQVLVQWSNTVPEDSTWEDWSSIIAHY 909
            +P LP +  +GQ   EP A+L RR++PR+N+ VTQ L+ W N  P ++TWED S I A +
Sbjct: 1547 MPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAAF 1606

Query: 910  PHFNP 924
            P+F P
Sbjct: 1607 PNFQP 1611


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  305 bits (782), Expect = 8e-81
 Identities = 153/308 (49%), Positives = 202/308 (65%), Gaps = 4/308 (1%)
 Frame = +1

Query: 13   NCQGLHGQHIQVAWPSPIHYIRPRQNLINS-FWKNLFKTLGTKLHLSTSYHPQTDGQTER 189
            N   LHG         P+  I  R  +  S  ++ +FK++  +L  STSYHPQTDGQTER
Sbjct: 1290 NIHRLHGM--------PMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTER 1341

Query: 190  TYTCLETYLRCMTGHKPQSWVKWLPLAEGWFNTNYHNSLKMAPFTALYGYSPPHL---AI 360
               CLE+YLR MT  +P  W  WL LAE W+NT YH S++M PF ALYGY PP +   ++
Sbjct: 1342 VNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSV 1401

Query: 361  LANVTHSIAAVDDYLKERQAMVEVIKDDLYKAQERMKFYADKKRTERSFAVGDWVYLKLQ 540
              NV+         ++++ A+++ +K  L +AQ R+K YAD+ R+ER+ AVGD VYLKLQ
Sbjct: 1402 PCNVSEEARVT---IEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQ 1458

Query: 541  PYRQTSVALRKNLKLSAKFYGPFQVLARIGVVAYKLQLPIGSKIHPVFHVSQLKPKLGIT 720
            PYRQT+  +R +LKL +KFYGPF+++ ++G VAYKLQLP GS IHPVFHVSQLK  +G  
Sbjct: 1459 PYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSR 1518

Query: 721  ITPVPQLPLVDQEGQFLVEPVAILSRRIVPRNNKAVTQVLVQWSNTVPEDSTWEDWSSII 900
              P+  LP V  +GQ   EPVA+L RR++PR   AVTQ LV W N  P ++TWED S I 
Sbjct: 1519 AVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQ 1578

Query: 901  AHYPHFNP 924
            + +P FNP
Sbjct: 1579 SMFPSFNP 1586


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  290 bits (743), Expect(2) = 1e-80
 Identities = 141/276 (51%), Positives = 184/276 (66%)
 Frame = +1

Query: 97   NSFWKNLFKTLGTKLHLSTSYHPQTDGQTERTYTCLETYLRCMTGHKPQSWVKWLPLAEG 276
            +S WK +F+  G KLH S++YHPQTDGQ+ER   CLE YLRCMT  KP+ W   LP AE 
Sbjct: 591  SSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEW 650

Query: 277  WFNTNYHNSLKMAPFTALYGYSPPHLAILANVTHSIAAVDDYLKERQAMVEVIKDDLYKA 456
            W+NT +H SL M+P+ AL+G  PP LA L      +    +  + + A++E IK  L KA
Sbjct: 651  WYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKA 710

Query: 457  QERMKFYADKKRTERSFAVGDWVYLKLQPYRQTSVALRKNLKLSAKFYGPFQVLARIGVV 636
            Q RMK++AD+ R ER+  VGD VYLK+QPYR  S+ L  +LKL +++YGPF+VL RIG V
Sbjct: 711  QARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSV 770

Query: 637  AYKLQLPIGSKIHPVFHVSQLKPKLGITITPVPQLPLVDQEGQFLVEPVAILSRRIVPRN 816
            AYKL LP+ S+IH VFHVSQLK  LG    P   LPL+D EG+ L  P+A+L RR++PRN
Sbjct: 771  AYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRN 830

Query: 817  NKAVTQVLVQWSNTVPEDSTWEDWSSIIAHYPHFNP 924
            N+ V Q  + W+N     +TWED + I   +P F P
Sbjct: 831  NEPVVQWKIHWANLPESAATWEDAAFITKVFPSFTP 866



 Score = 37.0 bits (84), Expect(2) = 1e-80
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 2   TASTIAKVFMDNIYKLHGLPQSITLDRDKILST 100
           TA  I   F+++ YKLHGLP  I  DRD+I ++
Sbjct: 559 TADQILTQFLEHFYKLHGLPTVIVSDRDRIFTS 591