BLASTX nr result

ID: Coptis24_contig00011261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011261
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24025.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_003576493.1| PREDICTED: uncharacterized protein LOC100840...    75   4e-12
ref|XP_002331551.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago t...    75   7e-12

>emb|CBI24025.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = -1

Query: 387 FVSPENVNECISLAQEFRELPKSHRAKEDKLEVKKMILHTINKAVSELEQLS 232
           FVSPEN++EC+ L +EFR LP +HRAKEDKLEVKKM LH + +AV  LEQL+
Sbjct: 787 FVSPENIHECVRLTEEFRALPHNHRAKEDKLEVKKMSLHALRQAVDNLEQLT 838


>ref|XP_003576493.1| PREDICTED: uncharacterized protein LOC100840043 [Brachypodium
           distachyon]
          Length = 895

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -1

Query: 387 FVSPENVNECISLAQEFRELPKSHRAKEDKLEVKKMILHTINKAVSELE 241
           FVSPENVNEC+ L Q+FR LPK+HRAKEDKLEVKKMI++ + +AV  L+
Sbjct: 830 FVSPENVNECLKLTQQFRMLPKNHRAKEDKLEVKKMIIYAVEQAVRTLK 878


>ref|XP_002331551.1| predicted protein [Populus trichocarpa] gi|222873775|gb|EEF10906.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/51 (60%), Positives = 45/51 (88%)
 Frame = -1

Query: 387 FVSPENVNECISLAQEFRELPKSHRAKEDKLEVKKMILHTINKAVSELEQL 235
           FVSPEN+ EC+ L +EFR+LP +HRA+EDKLE+KKMI++ I+KA+ +L++L
Sbjct: 638 FVSPENIKECLRLTEEFRQLPMNHRAREDKLEIKKMIIYAIDKAIIDLQEL 688


>ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|222860207|gb|EEE97754.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/52 (59%), Positives = 46/52 (88%)
 Frame = -1

Query: 387 FVSPENVNECISLAQEFRELPKSHRAKEDKLEVKKMILHTINKAVSELEQLS 232
           FVSPEN+ EC+ L +EFR+LP +HRA+EDKLE+KKMI++ I+KA+ +L++L+
Sbjct: 645 FVSPENIRECLRLTEEFRQLPVNHRAREDKLEIKKMIIYAIDKAIIDLQELT 696


>ref|XP_003610469.1| Lysine-specific demethylase 3A-B [Medicago truncatula]
           gi|355511524|gb|AES92666.1| Lysine-specific demethylase
           3A-B [Medicago truncatula]
          Length = 870

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/51 (62%), Positives = 45/51 (88%)
 Frame = -1

Query: 387 FVSPENVNECISLAQEFRELPKSHRAKEDKLEVKKMILHTINKAVSELEQL 235
           FVSPENV+EC+ L +EFR+LPK H+A+EDKLE++KMI++ I++AV +LE L
Sbjct: 816 FVSPENVHECLRLTEEFRQLPKKHKAREDKLEIQKMIVYAIDQAVKDLEAL 866


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