BLASTX nr result
ID: Coptis24_contig00011256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011256
(1123 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264011.2| PREDICTED: tRNA uridine 5-carboxymethylamino... 291 2e-76
emb|CBI37507.3| unnamed protein product [Vitis vinifera] 285 1e-74
ref|XP_002516320.1| glucose inhibited division protein A, putati... 283 4e-74
ref|XP_004159235.1| PREDICTED: LOW QUALITY PROTEIN: tRNA uridine... 283 7e-74
ref|XP_004143346.1| PREDICTED: tRNA uridine 5-carboxymethylamino... 282 9e-74
>ref|XP_002264011.2| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
enzyme MnmG-like [Vitis vinifera]
Length = 722
Score = 291 bits (746), Expect = 2e-76
Identities = 146/197 (74%), Positives = 171/197 (86%)
Frame = +3
Query: 3 GWEIGLIDDRRWKLYQDKQEHILEEKQRLKAVRISGGDLAADVTLSSGQPVKDYSTLESL 182
G EIGLIDDRRWK+YQDKQ I +EK+RL+ VRISGGDLA+DVT SGQPVKD STLES+
Sbjct: 516 GREIGLIDDRRWKIYQDKQAQISQEKKRLRTVRISGGDLASDVTHLSGQPVKDSSTLESI 575
Query: 183 LKKPHVQYKILDKHGFGNGSLSRAEKDCVEIDIKYEGFIARQKTQLREIANLQQKSLPDD 362
LKKPHVQYK+LDKHGFGN LS+ EK+CVEIDIKYEGFI RQ++QL+++A Q + LP+D
Sbjct: 576 LKKPHVQYKVLDKHGFGNELLSKIEKECVEIDIKYEGFIMRQQSQLQQMARQQHRPLPED 635
Query: 363 LDYNAMTTLCLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILETNRRKAHELNRHK 542
LDY AMTTL LEAREKLSK+RPQTIGQASRVGGVSPADITALLIILETNRRKA E R +
Sbjct: 636 LDYYAMTTLSLEAREKLSKIRPQTIGQASRVGGVSPADITALLIILETNRRKAQEQRRCQ 695
Query: 543 ILTTMMVDAEQNASTPV 593
+LT++MVD ++ + P+
Sbjct: 696 LLTSVMVDQDKCITAPL 712
>emb|CBI37507.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 285 bits (729), Expect = 1e-74
Identities = 143/186 (76%), Positives = 164/186 (88%)
Frame = +3
Query: 3 GWEIGLIDDRRWKLYQDKQEHILEEKQRLKAVRISGGDLAADVTLSSGQPVKDYSTLESL 182
G EIGLIDDRRWK+YQDKQ I +EK+RL+ VRISGGDLA+DVT SGQPVKD STLES+
Sbjct: 612 GREIGLIDDRRWKIYQDKQAQISQEKKRLRTVRISGGDLASDVTHLSGQPVKDSSTLESI 671
Query: 183 LKKPHVQYKILDKHGFGNGSLSRAEKDCVEIDIKYEGFIARQKTQLREIANLQQKSLPDD 362
LKKPHVQYK+LDKHGFGN LS+ EK+CVEIDIKYEGFI RQ++QL+++A Q + LP+D
Sbjct: 672 LKKPHVQYKVLDKHGFGNELLSKIEKECVEIDIKYEGFIMRQQSQLQQMARQQHRPLPED 731
Query: 363 LDYNAMTTLCLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILETNRRKAHELNRHK 542
LDY AMTTL LEAREKLSK+RPQTIGQASRVGGVSPADITALLIILETNRRKA E R +
Sbjct: 732 LDYYAMTTLSLEAREKLSKIRPQTIGQASRVGGVSPADITALLIILETNRRKAQEQRRCQ 791
Query: 543 ILTTMM 560
+LT++M
Sbjct: 792 LLTSVM 797
>ref|XP_002516320.1| glucose inhibited division protein A, putative [Ricinus communis]
gi|223544550|gb|EEF46067.1| glucose inhibited division
protein A, putative [Ricinus communis]
Length = 319
Score = 283 bits (725), Expect = 4e-74
Identities = 144/197 (73%), Positives = 165/197 (83%)
Frame = +3
Query: 3 GWEIGLIDDRRWKLYQDKQEHILEEKQRLKAVRISGGDLAADVTLSSGQPVKDYSTLESL 182
G EIGLIDDRRW LYQDKQ I EEK+RLK VRISGG+LAADVT S QPVK STLESL
Sbjct: 117 GHEIGLIDDRRWGLYQDKQARISEEKKRLKTVRISGGELAADVTCLSRQPVKGSSTLESL 176
Query: 183 LKKPHVQYKILDKHGFGNGSLSRAEKDCVEIDIKYEGFIARQKTQLREIANLQQKSLPDD 362
LKKPH+QY++LDKHGFGN LSR EK+CVEIDIKYEGFI RQ+ QL+++A+ Q + LP+D
Sbjct: 177 LKKPHIQYRVLDKHGFGNELLSREEKECVEIDIKYEGFIIRQQIQLQQMAHQQNRPLPED 236
Query: 363 LDYNAMTTLCLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILETNRRKAHELNRHK 542
LDY AMTTL LEAREKLSKVRPQTIGQASR+ GVSPADITALLIILE NRRKA E RH+
Sbjct: 237 LDYYAMTTLSLEAREKLSKVRPQTIGQASRIAGVSPADITALLIILEANRRKAQEKRRHQ 296
Query: 543 ILTTMMVDAEQNASTPV 593
IL +++ DA ++ P+
Sbjct: 297 ILKSVVTDANPVSNVPL 313
>ref|XP_004159235.1| PREDICTED: LOW QUALITY PROTEIN: tRNA uridine
5-carboxymethylaminomethyl modification enzyme MnmG-like
[Cucumis sativus]
Length = 730
Score = 283 bits (723), Expect = 7e-74
Identities = 143/197 (72%), Positives = 168/197 (85%), Gaps = 3/197 (1%)
Frame = +3
Query: 3 GWEIGLIDDRRWKLYQDKQEHILEEKQRLKAVRISGGDLAADVTLSSGQPVKDYSTLESL 182
G EIGLIDDRRWKLYQ+KQ I +EK+RLK VRISGG+LAADV+L SGQPVKDYSTLESL
Sbjct: 524 GREIGLIDDRRWKLYQEKQAKISDEKKRLKTVRISGGELAADVSLLSGQPVKDYSTLESL 583
Query: 183 LKKPHVQYKILDKHGFGNGSLSRAEKDCVEIDIKYEGFIARQKTQLREIANLQQKSLPDD 362
LKKPH+ Y + DKHGFGN L+++EKDCVEIDIKYEGFI RQ+TQL+++ + Q + LP+
Sbjct: 584 LKKPHIGYNVFDKHGFGNKLLTKSEKDCVEIDIKYEGFILRQQTQLQQMVHQQHRVLPEG 643
Query: 363 LDYNAMTTLCLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILETNRRKAHELNRHK 542
LDY AMTTL LEAREKLSKVRPQTIGQASRVGGVSPADITALLIILE+NRRKA E+ RH+
Sbjct: 644 LDYYAMTTLSLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILESNRRKAQEMKRHQ 703
Query: 543 ILTTMM---VDAEQNAS 584
+L +++ D E+ S
Sbjct: 704 MLGSIIRESTDVEERPS 720
>ref|XP_004143346.1| PREDICTED: tRNA uridine 5-carboxymethylaminomethyl modification
enzyme MnmG-like [Cucumis sativus]
Length = 730
Score = 282 bits (722), Expect = 9e-74
Identities = 142/197 (72%), Positives = 168/197 (85%), Gaps = 3/197 (1%)
Frame = +3
Query: 3 GWEIGLIDDRRWKLYQDKQEHILEEKQRLKAVRISGGDLAADVTLSSGQPVKDYSTLESL 182
G EIGLIDDRRWKLYQ+KQ I +EK+RLK VRISGG+LAAD++L SGQPVKDYSTLESL
Sbjct: 524 GREIGLIDDRRWKLYQEKQAKISDEKKRLKTVRISGGELAADISLLSGQPVKDYSTLESL 583
Query: 183 LKKPHVQYKILDKHGFGNGSLSRAEKDCVEIDIKYEGFIARQKTQLREIANLQQKSLPDD 362
LKKPH+ Y + DKHGFGN L+++EKDCVEIDIKYEGFI RQ+TQL+++ + Q + LP+
Sbjct: 584 LKKPHIGYNVFDKHGFGNKLLTKSEKDCVEIDIKYEGFILRQQTQLQQMVHQQHRVLPEG 643
Query: 363 LDYNAMTTLCLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILETNRRKAHELNRHK 542
LDY AMTTL LEAREKLSKVRPQTIGQASRVGGVSPADITALLIILE+NRRKA E+ RH+
Sbjct: 644 LDYYAMTTLSLEAREKLSKVRPQTIGQASRVGGVSPADITALLIILESNRRKAQEMKRHQ 703
Query: 543 ILTTMM---VDAEQNAS 584
+L +++ D E+ S
Sbjct: 704 MLGSIIRESTDVEERPS 720