BLASTX nr result

ID: Coptis24_contig00011252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011252
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   240   2e-61
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   239   3e-61
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   239   3e-61
emb|CBI36765.3| unnamed protein product [Vitis vinifera]              238   6e-61
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   238   6e-61

>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  240 bits (612), Expect = 2e-61
 Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 2/202 (0%)
 Frame = -1

Query: 600 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 421
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 420 SNSENQVSLHNELKSADAIVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDA 241
           S +E+   +  ELK ADA+VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD 
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDL 131

Query: 240 VEDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVFYYANVAVLFPTSPLFDKKK 67
            ++      ++ +  +MQ++ EIETC ECSA    Q+ +VFYYA  AVL PT PLFD++ 
Sbjct: 132 RDENQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQET 191

Query: 66  QKLKPRCERALKRIFNLCDHDK 1
           Q LKPRC RALKRIF LCDHDK
Sbjct: 192 QTLKPRCVRALKRIFILCDHDK 213


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  239 bits (611), Expect = 3e-61
 Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 2/202 (0%)
 Frame = -1

Query: 600 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 421
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 420 SNSENQVSLHNELKSADAIVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDA 241
           S +E+   +  ELK ADA+VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD 
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDL 131

Query: 240 VED--TTGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVFYYANVAVLFPTSPLFDKKK 67
            ++      ++ +  +MQ++ EIETC ECSA    Q+ +VFYYA  AVL PT PLFD++ 
Sbjct: 132 RDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQET 191

Query: 66  QKLKPRCERALKRIFNLCDHDK 1
           Q LKPRC RALKRIF LCDHDK
Sbjct: 192 QTLKPRCVRALKRIFILCDHDK 213


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  239 bits (611), Expect = 3e-61
 Identities = 125/202 (61%), Positives = 151/202 (74%), Gaps = 2/202 (0%)
 Frame = -1

Query: 600 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 421
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 420 SNSENQVSLHNELKSADAIVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDA 241
           S +E+   +  ELK ADA+VLTYACDQP +L+ LS+FWLP LRQL+V+VPVIVVGCKLD 
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLDL 131

Query: 240 VED--TTGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVFYYANVAVLFPTSPLFDKKK 67
            ++      ++ +  +MQ++ EIETC ECSA    Q+ +VFYYA  AVL PT PLFD++ 
Sbjct: 132 RDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQET 191

Query: 66  QKLKPRCERALKRIFNLCDHDK 1
           Q LKPRC RALKRIF LCDHDK
Sbjct: 192 QTLKPRCVRALKRIFILCDHDK 213


>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  238 bits (608), Expect = 6e-61
 Identities = 125/201 (62%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
 Frame = -1

Query: 597 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 418
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 54  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 109

Query: 417 NSENQVSLHNELKSADAIVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAV 238
           + EN+ +L +EL+ ADA+VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD  
Sbjct: 110 SLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLR 169

Query: 237 EDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVFYYANVAVLFPTSPLFDKKKQ 64
           ++      ++ +  +MQ++ EIETC ECSA    Q+ +VFYYA  AVL PT PLFD++ Q
Sbjct: 170 DENQQMSLEQVMSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGPLFDQETQ 229

Query: 63  KLKPRCERALKRIFNLCDHDK 1
            LKPRC RALKRIF LCDHD+
Sbjct: 230 TLKPRCVRALKRIFILCDHDR 250


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  238 bits (608), Expect = 6e-61
 Identities = 125/201 (62%), Positives = 151/201 (75%), Gaps = 2/201 (0%)
 Frame = -1

Query: 597 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 418
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 17  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 72

Query: 417 NSENQVSLHNELKSADAIVLTYACDQPLSLESLSSFWLPLLRQLQVKVPVIVVGCKLDAV 238
           + EN+ +L +EL+ ADA+VLTYACDQP +L+ LS+FWLP LR+L+VKVPVIVVGCKLD  
Sbjct: 73  SLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVVGCKLDLR 132

Query: 237 EDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVFYYANVAVLFPTSPLFDKKKQ 64
           ++      ++ +  +MQ++ EIETC ECSA    Q+ +VFYYA  AVL PT PLFD++ Q
Sbjct: 133 DENQQMSLEQVMSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGPLFDQETQ 192

Query: 63  KLKPRCERALKRIFNLCDHDK 1
            LKPRC RALKRIF LCDHD+
Sbjct: 193 TLKPRCVRALKRIFILCDHDR 213


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