BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011249
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   226   1e-57
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   224   4e-57
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              224   4e-57
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   224   7e-57
ref|XP_004164103.1| PREDICTED: DNA topoisomerase 1-like, partial...   213   2e-53

>ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1197

 Score =  226 bits (577), Expect = 1e-57
 Identities = 102/126 (80%), Positives = 116/126 (92%)
 Frame = +2

Query: 2    SAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGLLKDYWTRFSTYCAQAGNVDIRQV 181
            SAFL++HFSEVTDYSFTADMETELDNVSAG+TEWKGLL+DYWTRF +YC +  NV I QV
Sbjct: 922  SAFLSNHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFKSYCERTSNVHIHQV 981

Query: 182  EKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSRFGAGYFIGCDEHPKCKYIAKTLY 361
            EKMLE+KFGD+LFASLP++SR CPSC+ GTL FKVSRFGAGYFIGCD+HP+CKYIAKTLY
Sbjct: 982  EKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY 1041

Query: 362  GEEEED 379
            G EEE+
Sbjct: 1042 GTEEEE 1047


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  224 bits (572), Expect = 4e-57
 Identities = 102/126 (80%), Positives = 115/126 (91%)
 Frame = +2

Query: 2    SAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGLLKDYWTRFSTYCAQAGNVDIRQV 181
            SAFL+HHFSEVTDYSFTADMETELDNVSAG+TEWKGLLKDYWTRFS YC +  NV I QV
Sbjct: 914  SAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQV 973

Query: 182  EKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSRFGAGYFIGCDEHPKCKYIAKTLY 361
            EKMLE+KFGDFLF+ LP+KSRTCPSC+ GTL FKVSRFG+GYFIGCD+HPKCKYIAK L 
Sbjct: 974  EKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKMLD 1033

Query: 362  GEEEED 379
            G+++E+
Sbjct: 1034 GDDDEE 1039


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  224 bits (572), Expect = 4e-57
 Identities = 102/126 (80%), Positives = 115/126 (91%)
 Frame = +2

Query: 2    SAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGLLKDYWTRFSTYCAQAGNVDIRQV 181
            SAFL+HHFSEVTDYSFTADMETELDNVSAG+TEWKGLLKDYWTRFS YC +  NV I QV
Sbjct: 746  SAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQV 805

Query: 182  EKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSRFGAGYFIGCDEHPKCKYIAKTLY 361
            EKMLE+KFGDFLF+ LP+KSRTCPSC+ GTL FKVSRFG+GYFIGCD+HPKCKYIAK L 
Sbjct: 806  EKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKMLD 865

Query: 362  GEEEED 379
            G+++E+
Sbjct: 866  GDDDEE 871


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  224 bits (570), Expect = 7e-57
 Identities = 100/126 (79%), Positives = 113/126 (89%)
 Frame = +2

Query: 2    SAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGLLKDYWTRFSTYCAQAGNVDIRQV 181
            SAFL+HHFSEV DY FTADMETELDNVS G+TEWKGLL+DYWTRF +YC +  NV I QV
Sbjct: 795  SAFLSHHFSEVMDYGFTADMETELDNVSGGLTEWKGLLRDYWTRFKSYCERTSNVHIHQV 854

Query: 182  EKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSRFGAGYFIGCDEHPKCKYIAKTLY 361
            EKMLE+KFGD+LFASLP++SR CPSC+ GTL FKVSRFGAGYFIGCD+HP+CKYIAKTLY
Sbjct: 855  EKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY 914

Query: 362  GEEEED 379
            G EEE+
Sbjct: 915  GTEEEE 920


>ref|XP_004164103.1| PREDICTED: DNA topoisomerase 1-like, partial [Cucumis sativus]
          Length = 1103

 Score =  213 bits (541), Expect = 2e-53
 Identities = 95/126 (75%), Positives = 111/126 (88%)
 Frame = +2

Query: 2    SAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGLLKDYWTRFSTYCAQAGNVDIRQV 181
            SAFL HHFSEVTDYSFTADME ELDNVSAG+TEWKGLL+DYWTRFS+Y     +V I QV
Sbjct: 831  SAFLCHHFSEVTDYSFTADMENELDNVSAGLTEWKGLLRDYWTRFSSYFESVNSVHIHQV 890

Query: 182  EKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSRFGAGYFIGCDEHPKCKYIAKTLY 361
            EKMLE+K+G F+F+ LP+ SRTCPSC  GTLTFK+SRFGAGYF+GCD+HPKCKYIAKT +
Sbjct: 891  EKMLEKKYGSFIFSFLPDNSRTCPSCQEGTLTFKLSRFGAGYFVGCDQHPKCKYIAKTSH 950

Query: 362  GEEEED 379
            GE+E++
Sbjct: 951  GEDEDN 956