BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011246
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulat...    52   7e-07
ref|XP_002518996.1| 26S proteasome subunit, putative [Ricinus co...    52   3e-06
tpg|DAA36219.1| TPA: hypothetical protein ZEAMMB73_167293 [Zea m...    46   5e-06

>ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 2 [Vitis vinifera]
          Length = 400

 Score = 51.6 bits (122), Expect(2) = 7e-07
 Identities = 30/113 (26%), Positives = 50/113 (44%)
 Frame = +2

Query: 539 ALYLGNVYDFLEFSHDPKVKSVIGTSKEWIFEFLAPFYSADLNLFEANCHLYEEELVSSP 718
           AL   N+Y+F E    P +KS++GT  EW++  L  F S DL  ++  C ++   L + P
Sbjct: 209 ALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALSAQP 268

Query: 719 EXXXXXXXXXXXXXXXXXXXXXHGFLPSERIIPLQTLSLKMAVSIPEIESLLM 877
                                       +R IPL  ++ +  +S+ ++E LLM
Sbjct: 269 ALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDVEYLLM 321



 Score = 29.3 bits (64), Expect(2) = 7e-07
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +1

Query: 913  LVRGQLAAGLIDQVDGNVCVTSVKRRLLLDEVEERQVLERMAIWIDGV 1056
            L++  L  G+IDQV+G V V+ V+ R +L   + + + +R+  W+D V
Sbjct: 337  LLQVHLIEGIIDQVEGTVHVSWVQPR-VLGIPQIKSLRDRLDNWVDKV 383


>ref|XP_002518996.1| 26S proteasome subunit, putative [Ricinus communis]
           gi|223541983|gb|EEF43529.1| 26S proteasome subunit,
           putative [Ricinus communis]
          Length = 400

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 30/113 (26%), Positives = 50/113 (44%)
 Frame = +2

Query: 539 ALYLGNVYDFLEFSHDPKVKSVIGTSKEWIFEFLAPFYSADLNLFEANCHLYEEELVSSP 718
           AL   N+Y+F E    P +KS++GT  EW++  L  F S DL  ++  C ++   L + P
Sbjct: 209 ALLGDNIYNFGELLAHPIIKSLLGTQVEWLYYILQAFNSGDLVRYQELCRVHNASLRAQP 268

Query: 719 EXXXXXXXXXXXXXXXXXXXXXHGFLPSERIIPLQTLSLKMAVSIPEIESLLM 877
                                       +R IPL  ++ +  +S+ ++E LLM
Sbjct: 269 ALVENEQKLLEKINILCLMEIIFSRPSEDRTIPLTIIAERTKLSVEDVEHLLM 321



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 16/48 (33%), Positives = 30/48 (62%)
 Frame = +1

Query: 913  LVRGQLAAGLIDQVDGNVCVTSVKRRLLLDEVEERQVLERMAIWIDGV 1056
            L++  L  G+IDQV+G V V+ V+ R +L   + + + +R+  W++ V
Sbjct: 337  LLQVHLIEGIIDQVEGTVHVSWVQPR-VLGIPQIKSLRDRLDNWLEKV 383


>tpg|DAA36219.1| TPA: hypothetical protein ZEAMMB73_167293 [Zea mays]
          Length = 386

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 28/113 (24%), Positives = 48/113 (42%)
 Frame = +2

Query: 539 ALYLGNVYDFLEFSHDPKVKSVIGTSKEWIFEFLAPFYSADLNLFEANCHLYEEELVSSP 718
           AL   N+Y+F E    P + S++GT  EWIF  L  F S +L+L++  C  +   L +  
Sbjct: 209 ALLGENIYNFGELLAHPIIHSLLGTQAEWIFHMLQAFNSGNLSLYQEICKAHSNALSAQL 268

Query: 719 EXXXXXXXXXXXXXXXXXXXXXHGFLPSERIIPLQTLSLKMAVSIPEIESLLM 877
                                        R IP++ ++ +  + + ++E LLM
Sbjct: 269 ALVQNERNLLEKINMLCLMEIIFSRSSENRTIPMRDIAEQTKLPVEDVEYLLM 321



 Score = 32.0 bits (71), Expect(2) = 5e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 904  LITLVRGQLAAGLIDQVDGNVCVTSVKRRLL-LDEVEERQVLERMAIWIDGV 1056
            L+  +  +L  G+IDQVDG V V+ VK R+L +D+V  + + +R+  WI  V
Sbjct: 320  LMKSLSARLIEGIIDQVDGVVHVSRVKPRVLGIDQV--KCLHDRLDTWIGKV 369