BLASTX nr result

ID: Coptis24_contig00011239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011239
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276701.1| PREDICTED: uncharacterized protein LOC100267...    74   2e-11
ref|XP_003532422.1| PREDICTED: uncharacterized protein LOC100818...    72   6e-11
ref|XP_003525374.1| PREDICTED: uncharacterized protein LOC100784...    71   8e-11
ref|XP_002274512.1| PREDICTED: putative late blight resistance p...    68   9e-10
emb|CAN62788.1| hypothetical protein VITISV_029548 [Vitis vinifera]    68   9e-10

>ref|XP_002276701.1| PREDICTED: uncharacterized protein LOC100267123 isoform 1 [Vitis
           vinifera] gi|297745323|emb|CBI40403.3| unnamed protein
           product [Vitis vinifera]
          Length = 164

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
 Frame = -2

Query: 223 PKKDDPNKI--VNDLVNAYKAYNPHMTTHYYVRSMEDNPNACVIC 95
           PKK++  KI  V +LV AY+AYNPHMTTHYYV SME+NPNACVIC
Sbjct: 120 PKKEEEKKIDPVMELVKAYRAYNPHMTTHYYVHSMEENPNACVIC 164


>ref|XP_003532422.1| PREDICTED: uncharacterized protein LOC100818139 [Glycine max]
          Length = 161

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = -2

Query: 217 KDDPNKIVNDLVNAYKAYNPHMTTHYYVRSMEDNPNACVIC 95
           K DPN+ + +LV  YKAYNPHMTTHYYV+S E+NPNAC IC
Sbjct: 121 KKDPNQQIEELVKLYKAYNPHMTTHYYVQSAEENPNACAIC 161


>ref|XP_003525374.1| PREDICTED: uncharacterized protein LOC100784242 [Glycine max]
          Length = 136

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -2

Query: 220 KKDDPNKIVNDLVNAYKAYNPHMTTHYYVRSMEDNPNACVIC 95
           KK DPN+ + +LV  YKAYNPHMTT+YYV+S E+NPNAC IC
Sbjct: 95  KKKDPNQQIEELVKLYKAYNPHMTTYYYVQSAEENPNACAIC 136


>ref|XP_002274512.1| PREDICTED: putative late blight resistance protein homolog R1B-19
           [Vitis vinifera] gi|302143783|emb|CBI22644.3| unnamed
           protein product [Vitis vinifera]
          Length = 125

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 220 KKDDPNKIVNDLVNAYKAYNPHMTTHYYVRSMEDNPNACVIC 95
           KK+DP     DLV AY+AYNPH TTHY+VRS E++PNACVIC
Sbjct: 84  KKEDPKDQWADLVKAYQAYNPHYTTHYFVRSAEEDPNACVIC 125


>emb|CAN62788.1| hypothetical protein VITISV_029548 [Vitis vinifera]
          Length = 90

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 220 KKDDPNKIVNDLVNAYKAYNPHMTTHYYVRSMEDNPNACVIC 95
           KK+DP     DLV AY+AYNPH TTHY+VRS E++PNACVIC
Sbjct: 49  KKEDPKDQWADLVKAYQAYNPHYTTHYFVRSAEEDPNACVIC 90


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