BLASTX nr result
ID: Coptis24_contig00011232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00011232
(309 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi... 104 8e-21
ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
ref|NP_176496.1| pentatricopeptide repeat-containing protein [Ar... 100 2e-19
emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protei... 100 2e-19
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 99 4e-19
>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product
[Vitis vinifera]
Length = 627
Score = 104 bits (259), Expect = 8e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
RG+ PDV ++S+I +C + +WE AK +F++M+ E V P+VVTFN+L+D+LCK G+ +E
Sbjct: 267 RGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
A + + M QRG P FTYN+LIDG G+ DA +F
Sbjct: 327 ANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLF 366
Score = 91.3 bits (225), Expect = 7e-17
Identities = 41/101 (40%), Positives = 65/101 (64%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
QRG PD FT+ +LI C + +DA+ +F M S+ + D V++N+L++ CK GR
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMV 395
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
EA ++++EM + + PTV TYN+L+ GL+ GK +DA +F
Sbjct: 396 EAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLF 436
Score = 73.6 bits (179), Expect = 2e-11
Identities = 34/99 (34%), Positives = 57/99 (57%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ P+V TF LI LC + + E+A + M+ SPD T+N L+D C +GR +A
Sbjct: 303 GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDA 362
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
++F M +G++ +YN LI+G SG+ +A +++
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLY 401
Score = 71.6 bits (174), Expect = 6e-11
Identities = 31/101 (30%), Positives = 61/101 (60%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G++ D ++ LI C S + +AK+++ +M+ + + P V+T+N L+ L ++G+ ++
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A+ +F EM L P TYN L+DGL + +A+ +F+
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH 472
Score = 69.3 bits (168), Expect = 3e-10
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
+KP++ + ++I LC + K +F +M +SPDVV ++ ++ +C GR + A
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDA 294
+F EM G+ P V T+N LID L +GK ++A
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327
Score = 67.4 bits (163), Expect = 1e-09
Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSEN------VSPDVVTFNILVDSLCKQ 171
G +P+V T+ +L+ LC + A ++ +ML+ N + P++V + ++DSLCK
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
Query: 172 GRTKEAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
G + E+F EM RG+ P V Y+S+I G+ +G+ + A +FN
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/101 (32%), Positives = 57/101 (56%)
Frame = +1
Query: 1 SQRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRT 180
S GL+P+V T+T +I LC S Q E+AK +F M + +P++VTFN L+ C+
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569
Query: 181 KEAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRM 303
++ E+ QEM ++ P T + ++D L K ++ + +
Sbjct: 570 QKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHL 610
Score = 67.0 bits (162), Expect = 1e-09
Identities = 33/99 (33%), Positives = 55/99 (55%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
+ P V T+ +L+ L + DA +F +M +++P+ T+NIL+D LCK EA
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
E+F + +P++ +N LIDGL + K + A +FN
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507
Score = 66.6 bits (161), Expect = 2e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
L P+ T+ L+ LC +N +A +F + + + P + FN L+D LCK + + A
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
E+F + GL+P V TY +I GL SG+ ++A +F
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
GL PD T LI C N+ + V +ML SP+ VTF LV LC R EA
Sbjct: 122 GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEA 181
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRM 303
+ ++M + G +P V TY +L++GL +G A+++
Sbjct: 182 TGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/83 (31%), Positives = 52/83 (62%)
Frame = +1
Query: 16 KPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAFE 195
+P + F LI LC + + E A+ +F+++ E + P+V+T+ +++ LCK G+ + A +
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539
Query: 196 VFQEMYQRGLKPTVFTYNSLIDG 264
+F M ++G P + T+N+L+ G
Sbjct: 540 LFLGMEEKGCAPNLVTFNTLMRG 562
>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 102 bits (253), Expect = 4e-20
Identities = 45/100 (45%), Positives = 69/100 (69%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G+ P V ++TSLI C +WE+AKR+F++M+++ V P+VVTFN+L+D LCK+G+ E
Sbjct: 271 QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
A ++ + M QRG+ P + TYNSLI+G G A +F
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370
Score = 80.1 bits (196), Expect = 2e-13
Identities = 36/101 (35%), Positives = 59/101 (58%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
QRG+ P++ T+ SLI C A+ +F M S+ PDV+ + +L++ CK + +
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
EA +++ M Q G +P V TY +L+ GL+ GK DA ++F
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 440
Score = 77.4 bits (189), Expect = 1e-12
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSE------NVSPDVVTFNILVDSLCKQ 171
G P+ T+ +L++ LC + A ++ +ML++ N P V++++I++D+LCK
Sbjct: 196 GCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKD 255
Query: 172 GRTKEAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
R EA ++F+EM +G+ PTV +Y SLI G GK ++A R+FN
Sbjct: 256 RREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Score = 67.8 bits (164), Expect = 9e-10
Identities = 32/101 (31%), Positives = 58/101 (57%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G++P+V TF LI LC + +AK + M+ + P+++T+N L++ C G
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A E+F M +G +P V Y LI+G + K ++A++++N
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 406
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
+K D+ F LI LC + + E A +F ++ E + PDVVT+NI++ C+ G+ +A
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+FQ+M + G P TY +LI G + S K + + + +
Sbjct: 543 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581
Score = 65.5 bits (158), Expect = 4e-09
Identities = 30/89 (33%), Positives = 54/89 (60%)
Frame = +1
Query: 16 KPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAFE 195
KP V +++ +I LC + ++A+ +F +M + ++P V+++ L+ C G+ +EA
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298
Query: 196 VFQEMYQRGLKPTVFTYNSLIDGLYTSGK 282
+F EM +G++P V T+N LID L GK
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGK 327
Score = 63.5 bits (153), Expect = 2e-08
Identities = 29/91 (31%), Positives = 53/91 (58%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ D++ + + LC + +A +F+++ S N+ D+ FN L+D LCK G+ + A
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 506
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGK 282
+E+F+++ Q L+P V TYN +I G+
Sbjct: 507 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQ 537
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/101 (33%), Positives = 55/101 (54%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
Q G +PDV T+ +L+ L + DAK++F M + D+ + I ++ LCK G
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
EA E+F ++ +K + +N LIDGL +GK + A +F
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/98 (30%), Positives = 49/98 (50%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ PD T L+ LC N+ + V + +L PD+VT+ L+ LC + R +A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRM 303
+F M + G P TY +L+ GL +G A+++
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/101 (29%), Positives = 57/101 (56%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G +PDV +T LI C +++ E+A ++++ ML PDV T+ L+ L + G+ +
Sbjct: 376 KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGD 435
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A ++F M G+ ++ Y ++GL +G +A+ +FN
Sbjct: 436 AKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476
Score = 55.5 bits (132), Expect = 4e-06
Identities = 30/96 (31%), Positives = 46/96 (47%)
Frame = +1
Query: 19 PDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAFEV 198
P + +FT L+ L + +++QM +SPD T NIL++ LC R E V
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 199 FQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
+ +RG P + TY +LI GL + A +F
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
>ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein;
41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 99.8 bits (247), Expect = 2e-19
Identities = 45/100 (45%), Positives = 68/100 (68%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G++PDVFT++SLI LC +W DA R+ S ML ++P+VVTFN L+D+ K+G+ E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
A ++F EM QR + P + TYNSLI+G + +A ++F
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Score = 82.0 bits (201), Expect = 4e-14
Identities = 36/102 (35%), Positives = 68/102 (66%)
Frame = +1
Query: 1 SQRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRT 180
S+RGL + T+T+LI ++ ++A+ VF QM+S+ V P+++T+N L+D LCK G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 181 KEAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
++A VF+ + + ++P ++TYN + +G+ +GK +D +F
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 77.4 bits (189), Expect = 1e-12
Identities = 34/101 (33%), Positives = 63/101 (62%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
QR + P++ T+ SLI C ++ ++A+++F+ M+S++ PDVVT+N L++ CK +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
+ E+F++M +RGL TY +LI G + + +A +F
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Score = 74.7 bits (182), Expect = 7e-12
Identities = 30/99 (30%), Positives = 59/99 (59%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ P++ T+ +L+ LC + + E A VF + + PD+ T+NI+ + +CK G+ ++
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
+++F + +G+KP V YN++I G G ++A +F
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Score = 73.9 bits (180), Expect = 1e-11
Identities = 35/101 (34%), Positives = 60/101 (59%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G +PD+ T+ ++I LC + + A + ++M + DVV ++ ++DSLCK +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A +F EM +G++P VFTY+SLI L G+ DA R+ +
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Score = 71.6 bits (174), Expect = 6e-11
Identities = 33/99 (33%), Positives = 59/99 (59%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
++ DV ++++I LC +DA +F++M ++ + PDV T++ L+ LC GR +A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+ +M +R + P V T+NSLID GK +A ++F+
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/100 (31%), Positives = 50/100 (50%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G P + T SL+ C N+ +A + QM+ PD VTF LV L + + EA
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+ + M +G +P + TY ++I+GL G+ A+ + N
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Score = 62.4 bits (150), Expect = 4e-08
Identities = 26/82 (31%), Positives = 49/82 (59%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
++PD++T+ + +C + + ED +F + + V PDV+ +N ++ CK+G +EA+
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 193 EVFQEMYQRGLKPTVFTYNSLI 258
+F +M + G P TYN+LI
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLI 562
Score = 60.1 bits (144), Expect = 2e-07
Identities = 26/98 (26%), Positives = 50/98 (51%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ +++T+ +I LC +Q A + +M+ P +VT N L++ C R EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRM 303
+ +M + G +P T+ +L+ GL+ K +A+ +
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
>emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 99.8 bits (247), Expect = 2e-19
Identities = 45/100 (45%), Positives = 67/100 (67%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G+KPDVFT+ SLI LC +W DA R+ S M+ ++P+VVTFN L+D+ K+G+ E
Sbjct: 285 KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIE 344
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
A ++F EM QR + P + TYNSLI+G + +A ++F
Sbjct: 345 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Score = 89.0 bits (219), Expect = 4e-16
Identities = 41/101 (40%), Positives = 66/101 (65%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
QR + P++ T+ SLI C ++ ++A+++F+ M+S++ PDVVT+N L+ CK R +
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
E E+F+EM QRGL TYN+LI GL+ +G A ++F
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Score = 85.9 bits (211), Expect = 3e-15
Identities = 37/102 (36%), Positives = 70/102 (68%)
Frame = +1
Query: 1 SQRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRT 180
SQRGL + T+ +LI+ L + + A+++F +M+S+ V PD++T++IL+D LCK G+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482
Query: 181 KEAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
++A VF+ + + ++P ++TYN +I+G+ +GK +D +F
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 79.7 bits (195), Expect = 2e-13
Identities = 37/101 (36%), Positives = 60/101 (59%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
RG +PD+FT+ +++ LC + A + +M + +VV +N ++D LCK +
Sbjct: 215 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
AF++F +M +G+KP VFTYNSLI L G+ DA R+ +
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315
Score = 71.2 bits (173), Expect = 8e-11
Identities = 33/99 (33%), Positives = 58/99 (58%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
++ +V + ++I LC +DA +F++M ++ + PDV T+N L+ LC GR +A
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311
Query: 193 EVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+ +M +R + P V T+NSLID GK +A ++F+
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
Score = 71.2 bits (173), Expect = 8e-11
Identities = 29/99 (29%), Positives = 58/99 (58%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ PD+ T++ L+ LC + E A VF + + P++ T+NI+++ +CK G+ ++
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDG 520
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMF 306
+++F + +G+KP V Y ++I G G ++A +F
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559
Score = 65.1 bits (157), Expect = 6e-09
Identities = 33/102 (32%), Positives = 55/102 (53%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
+ G KPD TF +LI L N+ +A + +M++ PD+ T+ +V+ LCK+G
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A + ++M + ++ V YN++IDGL DA +FN
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFN 280
Score = 64.7 bits (156), Expect = 7e-09
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G +PD+ T +SL+ C + +A + QM+ PD VTFN L+ L + EA
Sbjct: 146 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEA 205
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSG 279
+ M RG +P +FTY ++++GL G
Sbjct: 206 VALIDRMVARGCQPDLFTYGTVVNGLCKRG 235
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/100 (29%), Positives = 52/100 (52%)
Frame = +1
Query: 10 GLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEA 189
G+ + +T++ L+ C +Q A V +M+ PD+VT + L++ C R EA
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170
Query: 190 FEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+ +M + G KP T+N+LI GL+ K +A+ + +
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALID 210
Score = 56.2 bits (134), Expect = 3e-06
Identities = 23/82 (28%), Positives = 48/82 (58%)
Frame = +1
Query: 13 LKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAF 192
++P+++T+ +I +C + + ED +F + + V P+V+ + ++ C++G +EA
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556
Query: 193 EVFQEMYQRGLKPTVFTYNSLI 258
+F+EM + G P YN+LI
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLI 578
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 99.0 bits (245), Expect = 4e-19
Identities = 42/102 (41%), Positives = 72/102 (70%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
Q+ + P++FT+ SLI LC QWE K + S+M++ N++P+V TF+IL+D LCK+G+ +
Sbjct: 231 QKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVE 290
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+A EV + M ++G++P + TY++++DG G+ A R+FN
Sbjct: 291 DADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFN 332
Score = 78.2 bits (191), Expect = 6e-13
Identities = 31/102 (30%), Positives = 68/102 (66%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
++G++PD+ T+++++ C Q + A+RVF+ + + + P++ +++IL++ CK+
Sbjct: 301 EKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLA 360
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
+A ++F E+ Q+GLKP TY++++ GL G+ DA ++F+
Sbjct: 361 KAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402
Score = 71.6 bits (174), Expect = 6e-11
Identities = 35/97 (36%), Positives = 56/97 (57%)
Frame = +1
Query: 4 QRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTK 183
Q KPDV T++ +I LC + A + ++M +N+ P++ T+N L+D LCK G+ +
Sbjct: 196 QGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWE 255
Query: 184 EAFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDA 294
+ + EM + P V T++ LIDGL GK +DA
Sbjct: 256 KVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDA 292
Score = 62.8 bits (151), Expect = 3e-08
Identities = 27/101 (26%), Positives = 60/101 (59%)
Frame = +1
Query: 7 RGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKE 186
+G+KP++F+++ LI C A ++F ++ + + PD VT++ ++ L + GR +
Sbjct: 337 KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGD 396
Query: 187 AFEVFQEMYQRGLKPTVFTYNSLIDGLYTSGKGKDAIRMFN 309
A ++F EM + G P + +++L+ G + G ++A+ +F+
Sbjct: 397 AKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFS 437
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/89 (33%), Positives = 47/89 (52%)
Frame = +1
Query: 16 KPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVTFNILVDSLCKQGRTKEAFE 195
+P+ + +++ L E + M N PDV T++I++D+LCK A
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224
Query: 196 VFQEMYQRGLKPTVFTYNSLIDGLYTSGK 282
+ EM Q+ + P +FTYNSLIDGL G+
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 35/128 (27%)
Frame = +1
Query: 1 SQRGLKPDVFTFTSLIRHLCTSNQWEDAKRVFSQMLSENVSPDVVT-------------- 138
SQ+GLKPD T+++++ L + DAK++F +ML +PD+
Sbjct: 370 SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV 429
Query: 139 ---------------------FNILVDSLCKQGRTKEAFEVFQEMYQRGLKPTVFTYNSL 255
+ ++++ LCK R +EA +F+++ GL P V TYN +
Sbjct: 430 EEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVM 489
Query: 256 IDGLYTSG 279
I G G
Sbjct: 490 ITGFCREG 497