BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011231
         (1699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   602   e-169
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   598   e-168
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   564   e-158
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ...   561   e-157
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149

>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  602 bits (1551), Expect = e-169
 Identities = 307/461 (66%), Positives = 361/461 (78%)
 Frame = +3

Query: 18   KKMDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXX 197
            KKMDEE + +DENFPLFSKR KP   P+ NS T   + P   +                 
Sbjct: 102  KKMDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFAD 158

Query: 198  LNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAE 377
            L L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE
Sbjct: 159  LGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAE 218

Query: 378  NRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIA 557
            + +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IA
Sbjct: 219  DPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIA 278

Query: 558  TPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSA 737
            TPGR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSA
Sbjct: 279  TPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSA 338

Query: 738  TMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGI 917
            TMT +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGI
Sbjct: 339  TMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGI 398

Query: 918  RSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVA 1097
            RSAI+FVS C++C                         RL+A+ RFKSGQVP+LLATDVA
Sbjct: 399  RSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVA 458

Query: 1098 SRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTK 1277
            SRGLDIPTVDLV+NYDIPR+  DY                 S+VTQNDVDLIHEIEA   
Sbjct: 459  SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 518

Query: 1278 KQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1400
            KQL+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 519  KQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 559


>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
            vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
            product [Vitis vinifera]
          Length = 489

 Score =  598 bits (1541), Expect = e-168
 Identities = 305/459 (66%), Positives = 359/459 (78%)
 Frame = +3

Query: 24   MDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXXLN 203
            MDEE + +DENFPLFSKR KP   P+ NS T   + P   +                 L 
Sbjct: 1    MDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFADLG 57

Query: 204  LSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAENR 383
            L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE+ 
Sbjct: 58   LAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDP 117

Query: 384  YGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATP 563
            +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IATP
Sbjct: 118  FGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATP 177

Query: 564  GRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATM 743
            GR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSATM
Sbjct: 178  GRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATM 237

Query: 744  TENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRS 923
            T +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGIRS
Sbjct: 238  TSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRS 297

Query: 924  AIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVASR 1103
            AI+FVS C++C                         RL+A+ RFKSGQVP+LLATDVASR
Sbjct: 298  AIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASR 357

Query: 1104 GLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQ 1283
            GLDIPTVDLV+NYDIPR+  DY                 S+VTQNDVDLIHEIEA   KQ
Sbjct: 358  GLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQ 417

Query: 1284 LEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1400
            L+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 418  LDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 456


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus]
          Length = 491

 Score =  564 bits (1454), Expect = e-158
 Identities = 291/461 (63%), Positives = 344/461 (74%), Gaps = 3/461 (0%)
 Frame = +3

Query: 30   EEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKA---LEXXXXXXXXXXXXXXXXXL 200
            ++E+ +D NFPLFSK  +    P+ N     +  PK    +E                 L
Sbjct: 2    DQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFADL 61

Query: 201  NLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAEN 380
             LS+W ++TCKEL +KKPT VQ HCIPKILAG DVLG+A+TGSGKTAAFALPILQ+L+E 
Sbjct: 62   GLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSET 121

Query: 381  RYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIAT 560
             +GV+ALV+TPTRELA+QLA+QF+ALGS L+LRCSV+VGGMDM+ Q + L+ RPH++IAT
Sbjct: 122  PFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIAT 181

Query: 561  PGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSAT 740
            PGRIKVL+E NPDI  VF +TKFLVLDEADRVLDVGFEEEL+VIF+CLP NRQTLLFSAT
Sbjct: 182  PGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSAT 241

Query: 741  MTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIR 920
            MT++L+TL +LSANKAYFY+AYEG +TV+ LKQQY+FIP+++KD+YLLH+LSKMEDMGIR
Sbjct: 242  MTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIR 301

Query: 921  SAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVAS 1100
            SAI+FV  CK+C                         RL+AL RFKSG+VPVLLATDVAS
Sbjct: 302  SAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVAS 361

Query: 1101 RGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKK 1280
            RGLDIPTVDLVINYDIPR   DY                 S +TQNDV LIHEIEAN  K
Sbjct: 362  RGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGK 421

Query: 1281 QLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403
            QLE FECKENEVL NITKVYKAR ++ MKM D GFEEK KE
Sbjct: 422  QLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKE 462


>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 502

 Score =  561 bits (1445), Expect = e-157
 Identities = 284/469 (60%), Positives = 351/469 (74%), Gaps = 9/469 (1%)
 Frame = +3

Query: 24   MDEEEIPIDENFPLF---SKRSKPILT------PTSNSQTPISHIPKALEXXXXXXXXXX 176
            M++EEI +++NFPLF   SK  KP+ T      P + ++      PK  +          
Sbjct: 1    MEQEEIQVEKNFPLFFKPSKTHKPLQTIKPPKAPKTQNRKNDLETPKIEKEKSTNSITMD 60

Query: 177  XXXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALP 356
                   L L++WA+ TCKELG+K+PTPVQ HCIPKIL G DVLGLA+TGSGKTA FALP
Sbjct: 61   ETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALP 120

Query: 357  ILQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMS 536
            IL +LAE+ YG++ALVITPTRELA+QLA+QF+ALGS L+LRC+V+VGGMD + Q K LM+
Sbjct: 121  ILHRLAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMA 180

Query: 537  RPHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENR 716
            RPHV+IATPGR+KVL+E NPDI +VF +TKFLVLDEADRVLDVGFE+ELRV+F+CLP+NR
Sbjct: 181  RPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNR 240

Query: 717  QTLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILS 896
            QTLLFSATMT NL++LLE+SANKAYFY+AYEG +TV++LKQQY+ +P+N+KDVYL++ILS
Sbjct: 241  QTLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILS 300

Query: 897  KMEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPV 1076
            KMEDMGIRSAI+FVS C+TC                         RLSAL+RFKSGQ  +
Sbjct: 301  KMEDMGIRSAIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKSGQASI 360

Query: 1077 LLATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIH 1256
            L+ATDVASRGLDIPTVDLV+NYD+PR+  DY                 S ++QND  LI 
Sbjct: 361  LIATDVASRGLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQNDFVLIR 420

Query: 1257 EIEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403
            EIEA   KQL +FECKENEVL++ITK++KAR ++ MKM DDGFEEK KE
Sbjct: 421  EIEAVLGKQLGEFECKENEVLSDITKIFKARHVATMKMLDDGFEEKEKE 469


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  535 bits (1377), Expect = e-149
 Identities = 283/468 (60%), Positives = 339/468 (72%), Gaps = 6/468 (1%)
 Frame = +3

Query: 18   KKMDEEEIPIDENFPLFSKRSK-PILTPTSN-SQTPISHIPK----ALEXXXXXXXXXXX 179
            ++  E+   +D NFPLFSK  K P L  T N  ++P   IPK    A             
Sbjct: 3    EQQQEKTHVVDSNFPLFSKTPKRPKLQKTQNPDESP--EIPKLEKEASSNPSNPDSAAAK 60

Query: 180  XXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPI 359
                  L LS+WAL+TCKELG+K PT VQ HCIPKIL+G DVLGLA+TGSGKTAAFALPI
Sbjct: 61   TTLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPI 120

Query: 360  LQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSR 539
            L +LAE+ +GV+ALVITPTRELA+QLA+QF+A GS L LRC+V+VGGMD++ Q K LM R
Sbjct: 121  LHRLAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGR 180

Query: 540  PHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQ 719
            PHV+IATPGRIKVL+E NPDI  VF RTKFLVLDEADR++DVGF+EELRV+FKCLP++RQ
Sbjct: 181  PHVVIATPGRIKVLLE-NPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQ 239

Query: 720  TLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSK 899
            TLLFSATMT  LQTLLELS NKAYFY+ YEG +TV++L QQY+ +P+N+K+VYL++ILSK
Sbjct: 240  TLLFSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSK 299

Query: 900  MEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVL 1079
            ME+MGIRSAI+FVS C TC                         RL++L RFKSGQ  +L
Sbjct: 300  MEEMGIRSAIIFVSACSTCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQASIL 359

Query: 1080 LATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHE 1259
            +ATD+ASRGLDIPTVDLVINYD+PR   DY                 SLV Q+D  L+  
Sbjct: 360  IATDLASRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKA 419

Query: 1260 IEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403
            IEA   KQ EKFECKENEVL++ITKVYKARR++ MKM DDGF+E  KE
Sbjct: 420  IEAEVGKQFEKFECKENEVLSDITKVYKARRVAKMKMMDDGFDELVKE 467