BLASTX nr result
ID: Coptis24_contig00011231
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011231 (1699 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera] 602 e-169 ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 598 e-168 ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 564 e-158 ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ... 561 e-157 ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2... 535 e-149 >emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera] Length = 592 Score = 602 bits (1551), Expect = e-169 Identities = 307/461 (66%), Positives = 361/461 (78%) Frame = +3 Query: 18 KKMDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXX 197 KKMDEE + +DENFPLFSKR KP P+ NS T + P + Sbjct: 102 KKMDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFAD 158 Query: 198 LNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAE 377 L L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE Sbjct: 159 LGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAE 218 Query: 378 NRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIA 557 + +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IA Sbjct: 219 DPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIA 278 Query: 558 TPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSA 737 TPGR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSA Sbjct: 279 TPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSA 338 Query: 738 TMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGI 917 TMT +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGI Sbjct: 339 TMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGI 398 Query: 918 RSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVA 1097 RSAI+FVS C++C RL+A+ RFKSGQVP+LLATDVA Sbjct: 399 RSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVA 458 Query: 1098 SRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTK 1277 SRGLDIPTVDLV+NYDIPR+ DY S+VTQNDVDLIHEIEA Sbjct: 459 SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 518 Query: 1278 KQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1400 KQL+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK Sbjct: 519 KQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 559 >ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis vinifera] gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera] Length = 489 Score = 598 bits (1541), Expect = e-168 Identities = 305/459 (66%), Positives = 359/459 (78%) Frame = +3 Query: 24 MDEEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKALEXXXXXXXXXXXXXXXXXLN 203 MDEE + +DENFPLFSKR KP P+ NS T + P + L Sbjct: 1 MDEETL-VDENFPLFSKR-KPTPKPSKNSTTTAQN-PNPEQPLTRTTNPTSPSSTFADLG 57 Query: 204 LSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAENR 383 L++WA++ CKELG+++PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL +LAE+ Sbjct: 58 LAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDP 117 Query: 384 YGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATP 563 +GV+ALV+TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IATP Sbjct: 118 FGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATP 177 Query: 564 GRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATM 743 GR+KVL+EQNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSATM Sbjct: 178 GRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATM 237 Query: 744 TENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRS 923 T +LQTLLELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGIRS Sbjct: 238 TSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRS 297 Query: 924 AIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVASR 1103 AI+FVS C++C RL+A+ RFKSGQVP+LLATDVASR Sbjct: 298 AIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASR 357 Query: 1104 GLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQ 1283 GLDIPTVDLV+NYDIPR+ DY S+VTQNDVDLIHEIEA KQ Sbjct: 358 GLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQ 417 Query: 1284 LEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAK 1400 L+KF+CKE EVL NITKVYKARR++ MKM DDGFEEKAK Sbjct: 418 LDKFDCKEKEVLDNITKVYKARRVATMKMMDDGFEEKAK 456 >ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis sativus] gi|449475871|ref|XP_004154575.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis sativus] Length = 491 Score = 564 bits (1454), Expect = e-158 Identities = 291/461 (63%), Positives = 344/461 (74%), Gaps = 3/461 (0%) Frame = +3 Query: 30 EEEIPIDENFPLFSKRSKPILTPTSNSQTPISHIPKA---LEXXXXXXXXXXXXXXXXXL 200 ++E+ +D NFPLFSK + P+ N + PK +E L Sbjct: 2 DQEVIVDRNFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFADL 61 Query: 201 NLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQKLAEN 380 LS+W ++TCKEL +KKPT VQ HCIPKILAG DVLG+A+TGSGKTAAFALPILQ+L+E Sbjct: 62 GLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSET 121 Query: 381 RYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIAT 560 +GV+ALV+TPTRELA+QLA+QF+ALGS L+LRCSV+VGGMDM+ Q + L+ RPH++IAT Sbjct: 122 PFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIAT 181 Query: 561 PGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSAT 740 PGRIKVL+E NPDI VF +TKFLVLDEADRVLDVGFEEEL+VIF+CLP NRQTLLFSAT Sbjct: 182 PGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSAT 241 Query: 741 MTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIR 920 MT++L+TL +LSANKAYFY+AYEG +TV+ LKQQY+FIP+++KD+YLLH+LSKMEDMGIR Sbjct: 242 MTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIR 301 Query: 921 SAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVLLATDVAS 1100 SAI+FV CK+C RL+AL RFKSG+VPVLLATDVAS Sbjct: 302 SAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVAS 361 Query: 1101 RGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKK 1280 RGLDIPTVDLVINYDIPR DY S +TQNDV LIHEIEAN K Sbjct: 362 RGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGK 421 Query: 1281 QLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403 QLE FECKENEVL NITKVYKAR ++ MKM D GFEEK KE Sbjct: 422 QLEIFECKENEVLENITKVYKARHVAKMKMVDGGFEEKVKE 462 >ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 502 Score = 561 bits (1445), Expect = e-157 Identities = 284/469 (60%), Positives = 351/469 (74%), Gaps = 9/469 (1%) Frame = +3 Query: 24 MDEEEIPIDENFPLF---SKRSKPILT------PTSNSQTPISHIPKALEXXXXXXXXXX 176 M++EEI +++NFPLF SK KP+ T P + ++ PK + Sbjct: 1 MEQEEIQVEKNFPLFFKPSKTHKPLQTIKPPKAPKTQNRKNDLETPKIEKEKSTNSITMD 60 Query: 177 XXXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALP 356 L L++WA+ TCKELG+K+PTPVQ HCIPKIL G DVLGLA+TGSGKTA FALP Sbjct: 61 ETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALP 120 Query: 357 ILQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMS 536 IL +LAE+ YG++ALVITPTRELA+QLA+QF+ALGS L+LRC+V+VGGMD + Q K LM+ Sbjct: 121 ILHRLAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMA 180 Query: 537 RPHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENR 716 RPHV+IATPGR+KVL+E NPDI +VF +TKFLVLDEADRVLDVGFE+ELRV+F+CLP+NR Sbjct: 181 RPHVVIATPGRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNR 240 Query: 717 QTLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILS 896 QTLLFSATMT NL++LLE+SANKAYFY+AYEG +TV++LKQQY+ +P+N+KDVYL++ILS Sbjct: 241 QTLLFSATMTSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILS 300 Query: 897 KMEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPV 1076 KMEDMGIRSAI+FVS C+TC RLSAL+RFKSGQ + Sbjct: 301 KMEDMGIRSAIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKSGQASI 360 Query: 1077 LLATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIH 1256 L+ATDVASRGLDIPTVDLV+NYD+PR+ DY S ++QND LI Sbjct: 361 LIATDVASRGLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQNDFVLIR 420 Query: 1257 EIEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403 EIEA KQL +FECKENEVL++ITK++KAR ++ MKM DDGFEEK KE Sbjct: 421 EIEAVLGKQLGEFECKENEVLSDITKIFKARHVATMKMLDDGFEEKEKE 469 >ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa] Length = 496 Score = 535 bits (1377), Expect = e-149 Identities = 283/468 (60%), Positives = 339/468 (72%), Gaps = 6/468 (1%) Frame = +3 Query: 18 KKMDEEEIPIDENFPLFSKRSK-PILTPTSN-SQTPISHIPK----ALEXXXXXXXXXXX 179 ++ E+ +D NFPLFSK K P L T N ++P IPK A Sbjct: 3 EQQQEKTHVVDSNFPLFSKTPKRPKLQKTQNPDESP--EIPKLEKEASSNPSNPDSAAAK 60 Query: 180 XXXXXXLNLSDWALETCKELGLKKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPI 359 L LS+WAL+TCKELG+K PT VQ HCIPKIL+G DVLGLA+TGSGKTAAFALPI Sbjct: 61 TTLFSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPI 120 Query: 360 LQKLAENRYGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSR 539 L +LAE+ +GV+ALVITPTRELA+QLA+QF+A GS L LRC+V+VGGMD++ Q K LM R Sbjct: 121 LHRLAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGR 180 Query: 540 PHVIIATPGRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQ 719 PHV+IATPGRIKVL+E NPDI VF RTKFLVLDEADR++DVGF+EELRV+FKCLP++RQ Sbjct: 181 PHVVIATPGRIKVLLE-NPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQ 239 Query: 720 TLLFSATMTENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSK 899 TLLFSATMT LQTLLELS NKAYFY+ YEG +TV++L QQY+ +P+N+K+VYL++ILSK Sbjct: 240 TLLFSATMTSELQTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSK 299 Query: 900 MEDMGIRSAIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALQRFKSGQVPVL 1079 ME+MGIRSAI+FVS C TC RL++L RFKSGQ +L Sbjct: 300 MEEMGIRSAIIFVSACSTCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQASIL 359 Query: 1080 LATDVASRGLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHE 1259 +ATD+ASRGLDIPTVDLVINYD+PR DY SLV Q+D L+ Sbjct: 360 IATDLASRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKA 419 Query: 1260 IEANTKKQLEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1403 IEA KQ EKFECKENEVL++ITKVYKARR++ MKM DDGF+E KE Sbjct: 420 IEAEVGKQFEKFECKENEVLSDITKVYKARRVAKMKMMDDGFDELVKE 467