BLASTX nr result

ID: Coptis24_contig00011229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011229
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33957.3| unnamed protein product [Vitis vinifera]              121   1e-25
ref|XP_002329540.1| predicted protein [Populus trichocarpa] gi|2...   115   9e-24
ref|XP_003516649.1| PREDICTED: uncharacterized protein LOC100784...   110   2e-22
ref|XP_003538763.1| PREDICTED: uncharacterized protein LOC100781...   110   3e-22
ref|XP_004163767.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   107   2e-21

>emb|CBI33957.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  121 bits (304), Expect = 1e-25
 Identities = 60/98 (61%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +1

Query: 349 CLKSNETDIWGGDVYAWSTLSDPWSYGSK-GASTFEKKFGGNGGGRICLKVKDALSLSGY 525
           CLKSN T  WGGDVYAWSTLS+PWSYGSK G ++ E +FGG+GGGR+ LKV+D L L+G 
Sbjct: 41  CLKSNRTKFWGGDVYAWSTLSEPWSYGSKGGGNSAENRFGGDGGGRVMLKVRDILYLNGS 100

Query: 526 VTAXXXXXXXXXXXXXXXXIVIHALKLKGNGTISAAGG 639
           VTA                I++HALKLKG GTISAAGG
Sbjct: 101 VTAEGGNGGPGRGGGSGGSIMVHALKLKGYGTISAAGG 138


>ref|XP_002329540.1| predicted protein [Populus trichocarpa] gi|222870249|gb|EEF07380.1|
           predicted protein [Populus trichocarpa]
          Length = 1337

 Score =  115 bits (287), Expect = 9e-24
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +1

Query: 349 CLKSNETDIWGGDVYAWSTLSDPWSYGSKGASTFEK-KFGGNGGGRICLKVKDALSLSGY 525
           CLK N+T  WGGDVYAWSTL++PWSYGSKG  T  + KFGGNGGGRI ++VK+ + L+G 
Sbjct: 128 CLKRNKTSNWGGDVYAWSTLAEPWSYGSKGGGTSSRNKFGGNGGGRIKIQVKEIVCLNGS 187

Query: 526 VTAXXXXXXXXXXXXXXXXIVIHALKLKGNGTISAAGGR 642
           + A                I +HA+KLKG GTISAAGGR
Sbjct: 188 IAAEGGDGGLIGGGGSGGSIFVHAVKLKGYGTISAAGGR 226



 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 40/69 (57%), Positives = 53/69 (76%)
 Frame = +3

Query: 3   PHVSVVCPFEGCTLNFKILGNVKVGQFAALVAGSIIVSATNLTLDLYSTINTTSLGGLPP 182
           PHVS+ CP EGC +   + GNV +GQ+A +VAGS++ +  NLT+D +S+INTT+LGG PP
Sbjct: 45  PHVSIACPIEGCMVTINMTGNVNIGQYATIVAGSVVFAVANLTMDSHSSINTTALGGSPP 104

Query: 183 AQTSGTPSG 209
            QTSGTP G
Sbjct: 105 PQTSGTPVG 113


>ref|XP_003516649.1| PREDICTED: uncharacterized protein LOC100784489 [Glycine max]
          Length = 1452

 Score =  110 bits (275), Expect = 2e-22
 Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +1

Query: 349 CLKSNETDIWGGDVYAWSTLSDPWSYGSK-GASTFEKKFGGNGGGRICLKVKDALSLSGY 525
           CLK+N+T+ WGGDVYAWSTLS+PWSYGSK G  + +K++GGNGGGR+ L VKD L ++G 
Sbjct: 200 CLKNNKTN-WGGDVYAWSTLSEPWSYGSKGGGKSTKKQYGGNGGGRVKLLVKDTLYVNGS 258

Query: 526 VTAXXXXXXXXXXXXXXXXIVIHALKLKGNGTISAAGG 639
           +TA                I++HA+KLKG G ISAAGG
Sbjct: 259 ITAKGGDGGSDGGGGSGGSILVHAVKLKGYGIISAAGG 296



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/67 (55%), Positives = 53/67 (79%)
 Frame = +3

Query: 9   VSVVCPFEGCTLNFKILGNVKVGQFAALVAGSIIVSATNLTLDLYSTINTTSLGGLPPAQ 188
           VS++CP EGC +   + GNVK+GQ A++V+GS+++SA NLT+   S I+++SLGG PP+Q
Sbjct: 119 VSLLCPMEGCMITVNVSGNVKLGQDASIVSGSVVLSAANLTMGYNSYIDSSSLGGSPPSQ 178

Query: 189 TSGTPSG 209
           TSGTP G
Sbjct: 179 TSGTPVG 185


>ref|XP_003538763.1| PREDICTED: uncharacterized protein LOC100781159 [Glycine max]
          Length = 1443

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +1

Query: 349 CLKSNETDIWGGDVYAWSTLSDPWSYGSK-GASTFEKKFGGNGGGRICLKVKDALSLSGY 525
           CLK+N+T+ WGGDVYAWSTLS+PWSYGSK G  + +KK+GGNGGGR+ L VKD L ++G 
Sbjct: 191 CLKNNKTN-WGGDVYAWSTLSEPWSYGSKGGGKSTKKKYGGNGGGRVKLLVKDNLYVNGS 249

Query: 526 VTAXXXXXXXXXXXXXXXXIVIHALKLKGNGTISAAGG 639
           +TA                I++HA+KLKG G I+AAGG
Sbjct: 250 ITAKGGDGGSDGGGGSGGSILVHAVKLKGYGIINAAGG 287



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 37/67 (55%), Positives = 54/67 (80%)
 Frame = +3

Query: 9   VSVVCPFEGCTLNFKILGNVKVGQFAALVAGSIIVSATNLTLDLYSTINTTSLGGLPPAQ 188
           VS++CP EGC +   + GN+K+GQ A++VAGS+++SA NLT++  S I+++SLGG PP+Q
Sbjct: 110 VSLLCPVEGCMITVNVSGNIKLGQNASIVAGSVVLSAANLTMEYNSYIDSSSLGGSPPSQ 169

Query: 189 TSGTPSG 209
           TSGTP G
Sbjct: 170 TSGTPVG 176


>ref|XP_004163767.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101208985
           [Cucumis sativus]
          Length = 1575

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
 Frame = +1

Query: 349 CLKSNETDIWGGDVYAWSTLSDPWSYGSKGAS-TFEKKFGGNGGGRICLKVKDALSLSGY 525
           C KSN+T  WGGDVYAWSTLS+PWSYGSKG   + EK +GG GGGR+ L +   L L+G 
Sbjct: 190 CFKSNQTSNWGGDVYAWSTLSEPWSYGSKGGGISDEKPYGGLGGGRVKLIIVGVLYLNGS 249

Query: 526 VTAXXXXXXXXXXXXXXXXIVIHALKLKGNGTISAAGGR 642
           + A                I +HA+KL+GNGTISAAGG+
Sbjct: 250 ILAEGGDGGSRGGGGSGGSIFVHAVKLRGNGTISAAGGK 288



 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 41/69 (59%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   PHVSVVCPFEGCTLNFKILGNVKVGQFAALVAGSIIVSATNLTLDLYSTINTTSLGGLPP 182
           PHV++ CP EGCT+   + GN+KV   A +VAGS+  SA NLT++  S INTTSLGG PP
Sbjct: 107 PHVAICCPIEGCTITLNMSGNIKVSHHAGVVAGSVXFSAANLTMEYNSYINTTSLGGAPP 166

Query: 183 AQTSGTPSG 209
           +QTSGTP G
Sbjct: 167 SQTSGTPFG 175


Top