BLASTX nr result
ID: Coptis24_contig00011225
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011225 (1788 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-... 98 6e-18 emb|CBI39750.3| unnamed protein product [Vitis vinifera] 98 6e-18 ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus c... 96 4e-17 emb|CBI16839.3| unnamed protein product [Vitis vinifera] 87 1e-14 ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-14 >ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera] Length = 4116 Score = 98.2 bits (243), Expect = 6e-18 Identities = 40/78 (51%), Positives = 59/78 (75%) Frame = -1 Query: 1788 TSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYRLPDSVVL 1609 T++ TH+ + VSP++T+GD R+L H+ CFP +GEI + GLMV+++S +Y LP+SV + Sbjct: 13 TNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPESVPI 72 Query: 1608 KDAFQGFKGTWFLHVDVT 1555 K AFQG KGTWFLH + + Sbjct: 73 KHAFQGLKGTWFLHTEAS 90 >emb|CBI39750.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 98.2 bits (243), Expect = 6e-18 Identities = 40/78 (51%), Positives = 59/78 (75%) Frame = -1 Query: 1788 TSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYRLPDSVVL 1609 T++ TH+ + VSP++T+GD R+L H+ CFP +GEI + GLMV+++S +Y LP+SV + Sbjct: 13 TNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPESVPI 72 Query: 1608 KDAFQGFKGTWFLHVDVT 1555 K AFQG KGTWFLH + + Sbjct: 73 KHAFQGLKGTWFLHTEAS 90 >ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus communis] gi|223544554|gb|EEF46071.1| hypothetical protein RCOM_1189860 [Ricinus communis] Length = 364 Score = 95.5 bits (236), Expect = 4e-17 Identities = 45/85 (52%), Positives = 60/85 (70%) Frame = -1 Query: 1788 TSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYRLPDSVVL 1609 T++ THI VSP +TA D KR+L EH FP++GEI + LMV+++S +Y L +S+ + Sbjct: 13 TNIGTHIAASVSPDITAADFKRELEREHLSFFPTLGEIKAHVLMVRRKSCFYHLTESLPI 72 Query: 1608 KDAFQGFKGTWFLHVDVTPSNQYDK 1534 K AFQG KGTWFLHV V PS+ DK Sbjct: 73 KYAFQGLKGTWFLHVKVQPSSNVDK 97 >emb|CBI16839.3| unnamed protein product [Vitis vinifera] Length = 1309 Score = 87.4 bits (215), Expect = 1e-14 Identities = 44/105 (41%), Positives = 61/105 (58%) Frame = -1 Query: 1788 TSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYRLPDSVVL 1609 TSL THI M VS T DLK+++ EH +CF SIG+I I+ L VK++ +Y L DS+ + Sbjct: 22 TSLDTHIAMIVSDVDTVADLKKKILLEHPLCFSSIGKIKIHALKVKRKGFFYHLSDSMFV 81 Query: 1608 KDAFQGFKGTWFLHVDVTPSNQYDKTACVSRDTQGGESTCQPTIE 1474 + AF G K TWFLHVD + S + + G C P+ + Sbjct: 82 RSAFDGVKRTWFLHVDASSSVEQSENQLACNPDSGNLLLCLPSAD 126 >ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|222852832|gb|EEE90379.1| predicted protein [Populus trichocarpa] Length = 435 Score = 87.0 bits (214), Expect = 1e-14 Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%) Frame = -1 Query: 1788 TSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGL-MVKKRSHYYRLPDSVV 1612 T++ THI MG+SP +T D KR+L H+ CFP +GEI + L V++ + +Y L +S+ Sbjct: 16 TNMDTHIAMGISPDITVADFKRELEKMHFNCFPKLGEIKVCELKQVRRNNCFYHLLESLP 75 Query: 1611 LKDAFQGFKGTWFLHVDVTPSNQY 1540 +K AFQG KG WFLHV++ SN + Sbjct: 76 IKYAFQGLKGNWFLHVEIRSSNSF 99