BLASTX nr result

ID: Coptis24_contig00011220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011220
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycin...   263   3e-68
ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355...   261   1e-67
ref|XP_004142560.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   260   3e-67
ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   259   5e-67
gb|ADN33851.1| ABC-transporter [Cucumis melo subsp. melo]             259   7e-67

>ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycine max]
           gi|255638918|gb|ACU19761.1| unknown [Glycine max]
          Length = 345

 Score =  263 bits (672), Expect = 3e-68
 Identities = 133/157 (84%), Positives = 146/157 (92%)
 Frame = -3

Query: 821 NMSDNEIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLL 642
           +MS+++I E V E LAAVGLKGVEDRLPSELSGGMKKRVALARSII D TKE+IEPEVLL
Sbjct: 190 SMSEDQISELVMETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLL 249

Query: 641 YDEPTAGLDPIASTVVEDLIRSVHLKGEDGFGEVGHNIASYVVVTHQHSTIKRAVDRLLF 462
           YDEPTAGLDPIASTVVEDLIRSVH+KG+D  G+ G NI+SYVVVTHQHSTIKRA+DRLLF
Sbjct: 250 YDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPG-NISSYVVVTHQHSTIKRAIDRLLF 308

Query: 461 LHEGKVVWEGRTHEFTTSTNPIVKQFASGSLDGPIRY 351
           LH+GK+VWEG THEFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 309 LHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIRY 345


>ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355499144|gb|AES80347.1|
           ABC transporter [Medicago truncatula]
          Length = 346

 Score =  261 bits (668), Expect = 1e-67
 Identities = 131/157 (83%), Positives = 145/157 (92%)
 Frame = -3

Query: 821 NMSDNEIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLL 642
           +M + EI E V+E LAAVGLKGVE+RLPSELSGGMKKRVALARSIIFD TK++IEPEVLL
Sbjct: 191 SMPEEEISELVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLL 250

Query: 641 YDEPTAGLDPIASTVVEDLIRSVHLKGEDGFGEVGHNIASYVVVTHQHSTIKRAVDRLLF 462
           YDEPTAGLDPIASTVVEDLIRSVH+KG D  G+ G NI+SYVVVTHQHSTIKRA+DRLLF
Sbjct: 251 YDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPG-NISSYVVVTHQHSTIKRAIDRLLF 309

Query: 461 LHEGKVVWEGRTHEFTTSTNPIVKQFASGSLDGPIRY 351
           LH+GK+VWEG THEFTTSTNPIV+QFASGSLDGPI+Y
Sbjct: 310 LHKGKLVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 346


>ref|XP_004142560.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3,
           chloroplastic-like [Cucumis sativus]
           gi|449485367|ref|XP_004157146.1| PREDICTED: protein
           TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
           [Cucumis sativus]
          Length = 348

 Score =  260 bits (664), Expect = 3e-67
 Identities = 132/157 (84%), Positives = 146/157 (92%)
 Frame = -3

Query: 821 NMSDNEIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLL 642
           ++S+++I E V ENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNT++ IEPEVLL
Sbjct: 193 SLSEDQISELVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEIEPEVLL 252

Query: 641 YDEPTAGLDPIASTVVEDLIRSVHLKGEDGFGEVGHNIASYVVVTHQHSTIKRAVDRLLF 462
           YDEPTAGLDPIASTVVEDLIRSVH+KGED  G+ G  IASY+VVTHQHSTI+RAVDRLLF
Sbjct: 253 YDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPG-KIASYIVVTHQHSTIRRAVDRLLF 311

Query: 461 LHEGKVVWEGRTHEFTTSTNPIVKQFASGSLDGPIRY 351
           L+EGKVVW+G T EFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 312 LYEGKVVWQGMTGEFTTSTNPIVQQFASGSLDGPIRY 348


>ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3,
           chloroplastic-like [Glycine max]
          Length = 345

 Score =  259 bits (662), Expect = 5e-67
 Identities = 132/157 (84%), Positives = 144/157 (91%)
 Frame = -3

Query: 821 NMSDNEIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLL 642
           +MS+++I E V E LAAVGLKGVEDRLPSELSGGMKKRVALARSII D T+E+ EPEVLL
Sbjct: 190 SMSEDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTEESKEPEVLL 249

Query: 641 YDEPTAGLDPIASTVVEDLIRSVHLKGEDGFGEVGHNIASYVVVTHQHSTIKRAVDRLLF 462
           YDEPTAGLDPIASTVVEDLIRSVH+KG D  G+ G NIASYVVVTHQHSTIKRA+DRLLF
Sbjct: 250 YDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPG-NIASYVVVTHQHSTIKRAIDRLLF 308

Query: 461 LHEGKVVWEGRTHEFTTSTNPIVKQFASGSLDGPIRY 351
           LH+GK+VWEG THEFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 309 LHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIRY 345


>gb|ADN33851.1| ABC-transporter [Cucumis melo subsp. melo]
          Length = 171

 Score =  259 bits (661), Expect = 7e-67
 Identities = 131/157 (83%), Positives = 146/157 (92%)
 Frame = -3

Query: 821 NMSDNEIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLL 642
           ++S+++I E V ENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNT++ IEPEVLL
Sbjct: 16  SLSEDQISELVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEIEPEVLL 75

Query: 641 YDEPTAGLDPIASTVVEDLIRSVHLKGEDGFGEVGHNIASYVVVTHQHSTIKRAVDRLLF 462
           YDEPTAGLDPIASTVVEDLIRSVH+KGED  G+ G  IASY+VVTHQHSTI+RAVDRLLF
Sbjct: 76  YDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPG-KIASYIVVTHQHSTIRRAVDRLLF 134

Query: 461 LHEGKVVWEGRTHEFTTSTNPIVKQFASGSLDGPIRY 351
           L+EG+VVW+G T EFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 135 LYEGRVVWQGMTGEFTTSTNPIVQQFASGSLDGPIRY 171


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