BLASTX nr result
ID: Coptis24_contig00011215
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00011215 (699 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518524.1| nuclear transport factor, putative [Ricinus ... 196 5e-48 ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|2... 192 4e-47 ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis... 192 7e-47 ref|XP_004145100.1| PREDICTED: nuclear transport factor 2-like [... 182 4e-44 ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [... 181 2e-43 >ref|XP_002518524.1| nuclear transport factor, putative [Ricinus communis] gi|223542369|gb|EEF43911.1| nuclear transport factor, putative [Ricinus communis] Length = 125 Score = 196 bits (497), Expect = 5e-48 Identities = 94/125 (75%), Positives = 107/125 (85%) Frame = -3 Query: 652 MEEQVELVGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFE 473 MEEQVE VGKAFV+HYY LFD R SL+SLY P+SMLTFEGQK+ G DDI++KLN LPF+ Sbjct: 1 MEEQVETVGKAFVNHYYNLFDNDRSSLASLYHPSSMLTFEGQKILGVDDISSKLNNLPFD 60 Query: 472 HCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLKFSQMFHLIPTLHGSFFVQNDIF 293 CKH I+TID QPSS GGI+VFVSG+LQLAGEEH L+FSQMFHLIP++ G FVQNDIF Sbjct: 61 QCKHAISTIDTQPSSFAGGIVVFVSGSLQLAGEEHPLRFSQMFHLIPSVQGGLFVQNDIF 120 Query: 292 RLNYG 278 RLNYG Sbjct: 121 RLNYG 125 >ref|XP_002317209.1| predicted protein [Populus trichocarpa] gi|222860274|gb|EEE97821.1| predicted protein [Populus trichocarpa] Length = 123 Score = 192 bits (489), Expect = 4e-47 Identities = 93/123 (75%), Positives = 105/123 (85%) Frame = -3 Query: 649 EEQVELVGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFEH 470 +EQVE+VGKAFVDHYY LFD R SL+SLYQPTSMLTFEGQK+ G +DI+ KLN LPF + Sbjct: 1 QEQVEVVGKAFVDHYYNLFDNDRSSLASLYQPTSMLTFEGQKIVGVEDISCKLNNLPFGN 60 Query: 469 CKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLKFSQMFHLIPTLHGSFFVQNDIFR 290 CKH I+TID QPS+ GGI+VFVSG+LQL GEEHHL+FSQMFHLIPT G FFVQND FR Sbjct: 61 CKHIISTIDSQPSAHGGGIVVFVSGSLQLPGEEHHLRFSQMFHLIPTQDGCFFVQNDFFR 120 Query: 289 LNY 281 LNY Sbjct: 121 LNY 123 >ref|XP_002267081.1| PREDICTED: nuclear transport factor 2 [Vitis vinifera] Length = 125 Score = 192 bits (487), Expect = 7e-47 Identities = 92/125 (73%), Positives = 105/125 (84%) Frame = -3 Query: 652 MEEQVELVGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFE 473 MEEQVE +G+AFVDHYY LFD R SL SLY TSMLTFEG KVQG D+I+ KLN LPF+ Sbjct: 1 MEEQVEGLGRAFVDHYYYLFDNDRSSLPSLYHSTSMLTFEGHKVQGVDEISQKLNLLPFD 60 Query: 472 HCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLKFSQMFHLIPTLHGSFFVQNDIF 293 C+H I+TID QPSS TGGI+VFVSG+L+L GEEH L+FSQMFHL+P+ GSFFVQNDIF Sbjct: 61 QCQHVISTIDSQPSSFTGGIMVFVSGSLKLPGEEHQLRFSQMFHLVPSSEGSFFVQNDIF 120 Query: 292 RLNYG 278 RLNYG Sbjct: 121 RLNYG 125 >ref|XP_004145100.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus] Length = 132 Score = 182 bits (463), Expect = 4e-44 Identities = 84/126 (66%), Positives = 105/126 (83%) Frame = -3 Query: 655 GMEEQVELVGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPF 476 GMEE+ +++GKAFV+HYY LFD R SLSSLYQP SMLTFEGQ++ G DI++KL QLPF Sbjct: 7 GMEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPF 66 Query: 475 EHCKHFITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLKFSQMFHLIPTLHGSFFVQNDI 296 E C+H ++TID QPSSV G IL+FVSG++++ EEH L+FSQMFHL+P+ G+ FVQNDI Sbjct: 67 ERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMFHLVPSPEGNLFVQNDI 126 Query: 295 FRLNYG 278 FRLNYG Sbjct: 127 FRLNYG 132 >ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus] Length = 173 Score = 181 bits (458), Expect = 2e-43 Identities = 84/119 (70%), Positives = 98/119 (82%) Frame = -3 Query: 637 ELVGKAFVDHYYLLFDTSRPSLSSLYQPTSMLTFEGQKVQGGDDIANKLNQLPFEHCKHF 458 + V KAFVDHYY FD +R +L +LYQ SMLTFEGQK+QG +I KL+ LPF+ CKH Sbjct: 54 DAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQCKHS 113 Query: 457 ITTIDCQPSSVTGGILVFVSGNLQLAGEEHHLKFSQMFHLIPTLHGSFFVQNDIFRLNY 281 ++T+DCQPS TGG+LVFVSGNLQLAGE+H LKFSQMFHL+PT GSFFVQNDIFRLNY Sbjct: 114 VSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFFVQNDIFRLNY 172