BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011202
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   547   e-153
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   528   e-148
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   514   e-143
gb|ABR16597.1| unknown [Picea sitchensis]                             508   e-141
ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810...   481   e-133

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  547 bits (1410), Expect = e-153
 Identities = 274/349 (78%), Positives = 303/349 (86%), Gaps = 4/349 (1%)
 Frame = -2

Query: 1035 RAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKDLKLHAKQLRRTLR 856
            RAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAKDLKLH+KQLRRTLR
Sbjct: 15   RAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHSKQLRRTLR 74

Query: 855  FFEEEKLVTRDHRKETAKGAKIFSAAVAATADGLM-KEGEDKLKLHTHSYCCLDYAQIYD 679
            FFEEEKLVTRDHR+ETAKGAKI+SAA+AAT DG   KEG++K+KLHTHSYCCLDYAQIYD
Sbjct: 75   FFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQTKEGDEKIKLHTHSYCCLDYAQIYD 134

Query: 678  VVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPNDEYFHCENCDTVL 499
            VVRYR+HRMKKKLKDELE++NTVQEYICPNC +RY ALDALRLIS  DEYFHCE+C+  L
Sbjct: 135  VVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISMEDEYFHCESCNGEL 194

Query: 498  VAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARIKDLPAPEFGSLQ 319
            VA SDKLA+ EIGDGDDNAR RR EKLKD+LQKM+VQLKPLM+QL+R+KDLP PEFGSLQ
Sbjct: 195  VAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQ 254

Query: 318  AWE-XXXXXXXXANGDSSTNDPSKSSLGQGYGGTPMPYLGETKVEVALS--GVKEEDVKP 148
            AWE         ANGDS+ ND SKSS G G+GGTPMP++GETKVEVA S  GVKEED K 
Sbjct: 255  AWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVGVKEEDSKS 314

Query: 147  DTGITSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDDKK 1
            +    S KVLPPWMIK+GM LT EQRGE+KQESKM SSS P+  SDDKK
Sbjct: 315  EIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSDDKK 363


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  528 bits (1361), Expect = e-148
 Identities = 269/348 (77%), Positives = 296/348 (85%), Gaps = 3/348 (0%)
 Frame = -2

Query: 1035 RAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKDLKLHAKQLRRTLR 856
            RAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAK+LKLH+KQLRRTLR
Sbjct: 15   RAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKELKLHSKQLRRTLR 74

Query: 855  FFEEEKLVTRDHRKETAKGAKIFSAAVAATADG-LMKEGEDKLKLHTHSYCCLDYAQIYD 679
            FFEEEKLVTRDHRKETAK AK+ +AAVA T DG   KEG+DK+K+HTHSYCCLDYAQIYD
Sbjct: 75   FFEEEKLVTRDHRKETAKAAKMHNAAVANTTDGHRTKEGDDKIKMHTHSYCCLDYAQIYD 134

Query: 678  VVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPNDEYFHCENCDTVL 499
            VVRYR+HRM+KKLKDELE++NTVQEY CPNC RRY ALDALRL+S  DEYFHCENCD  L
Sbjct: 135  VVRYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSLVDEYFHCENCDGEL 194

Query: 498  VAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARIKDLPAPEFGSLQ 319
            VA SDKLAA E GDGDDNAR RR EKLKD+LQKM+VQLKPLM QL+R+KDLP PEFGSLQ
Sbjct: 195  VAESDKLAAQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQLSRVKDLPVPEFGSLQ 254

Query: 318  AWE-XXXXXXXXANGDSSTNDPSKSSLGQGYGGTPMPYLGETKVEVALSGVK-EEDVKPD 145
             W+         ANGDSS NDPS+SS  QGYGGTPMP+LGETKVEV+ SGV+ +ED+K +
Sbjct: 255  EWQIHASAAGRAANGDSSYNDPSRSS--QGYGGTPMPFLGETKVEVSFSGVEGKEDLKSE 312

Query: 144  TGITSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDDKK 1
            T  T  KVLPPWMIKQGM LT EQRGEVKQ SKMD SS   +  DDKK
Sbjct: 313  TASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDDKK 360


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  514 bits (1323), Expect = e-143
 Identities = 263/350 (75%), Positives = 293/350 (83%), Gaps = 5/350 (1%)
 Frame = -2

Query: 1035 RAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKDLKLHAKQLRRTLR 856
            RAFYDDIT KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAK+LKLH+KQLRRTLR
Sbjct: 15   RAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLR 74

Query: 855  FFEEEKLVTRDHRKETAKGAKIFSAAVAATADGL--MKEGEDKLKLHTHSYCCLDYAQIY 682
            F EEEKL+TRDHR+ETAKGAKIFSAAVAATADG    KEG++K+K+HTHSYC LDYAQ+Y
Sbjct: 75   FLEEEKLITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKMHTHSYCSLDYAQVY 134

Query: 681  DVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPNDEYFHCENCDTV 502
            DVVRYRMHRMKKKLKDELE++NTVQEYICPNC+RRYTALDALRLIS  DEYFHCENC+  
Sbjct: 135  DVVRYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISFEDEYFHCENCNGE 194

Query: 501  LVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARIKDLPAPEFGSL 322
            LVA SDKLAA +  DGDDN R RR EKLKD+LQKM+ QLKPL+EQL+R+KDLP PEFG+L
Sbjct: 195  LVAESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQLSRVKDLPVPEFGTL 254

Query: 321  QAWE-XXXXXXXXANGDSSTNDPSKSSLGQGYGGTPMPYLGETKVEVALSGVKEE--DVK 151
             AWE          NGD + NDPSKSS  QGYGGTPMP++GETKVEVA SG +    D K
Sbjct: 255  LAWEARASAAARGINGDLNGNDPSKSS--QGYGGTPMPFVGETKVEVAFSGAEGTGVDAK 312

Query: 150  PDTGITSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDDKK 1
             ++  TS KVLPPWMIK+GM LT EQRGEVK ESK D+ S     SDDKK
Sbjct: 313  SESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDDKK 362


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  508 bits (1307), Expect = e-141
 Identities = 254/350 (72%), Positives = 297/350 (84%), Gaps = 5/350 (1%)
 Frame = -2

Query: 1035 RAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKDLKLHAKQLRRTLR 856
            RAFYDD T + + QPK+GRSDNRGMAVV+LDALTRRQWV+E+DLAKDLKLH+KQLRRTLR
Sbjct: 15   RAFYDDTTTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAKDLKLHSKQLRRTLR 74

Query: 855  FFEEEKLVTRDHRKETAKGAKIFSAAVAATADGLM--KEGEDKLKLHTHSYCCLDYAQIY 682
            FFEEE+L+TRDHR+ETAKGAK+F+AA+AATADG    KEGE+KLKLHTHSYCCLDYAQ Y
Sbjct: 75   FFEEERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKLHTHSYCCLDYAQTY 134

Query: 681  DVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPNDEYFHCENCDTV 502
            DVVRYR+HRMKK+LKDELE+RNT+QEYICPNCNRRY+ALDAL+LIS  ++ FHCENC++ 
Sbjct: 135  DVVRYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLISFTEDSFHCENCNSE 194

Query: 501  LVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARIKDLPAPEFGSL 322
            LVA SDKLAA+E GDG+DN R RR EKLK++L+KM+VQLKPLMEQL R+KDLP PEFGSL
Sbjct: 195  LVAESDKLAAEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQLTRVKDLPVPEFGSL 254

Query: 321  QAWE-XXXXXXXXANGDSSTNDPSKSSLGQGYGGTPMPYLGETKVEVALSG--VKEEDVK 151
              WE          +GD++ N+ SKSS GQG+GGTPMP+LGETKVEVALSG  VK ED K
Sbjct: 255  LQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGMEVKAEDSK 314

Query: 150  PDTGITSRKVLPPWMIKQGMLLTNEQRGEVKQESKMDSSSGPIDRSDDKK 1
             D  + S KVLPPWMI+QGM LTNEQRGEVKQE K D+ S  +  + +KK
Sbjct: 315  ED--VASLKVLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPAVEKK 362


>ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810405 [Glycine max]
          Length = 471

 Score =  481 bits (1237), Expect = e-133
 Identities = 251/351 (71%), Positives = 282/351 (80%), Gaps = 6/351 (1%)
 Frame = -2

Query: 1035 RAFYDDITMKGDTQPKTGRSDNRGMAVVILDALTRRQWVREEDLAKDLKLHAKQLRRTLR 856
            RAFYDD+T KGD QPKTGRSDNRG+AVV+LDALTRRQWVREEDLAKDLKLH KQLRRTLR
Sbjct: 14   RAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLR 73

Query: 855  FFEEEKLVTRDHRKETAKGAKIFSAAVAATADGLM--KEGEDKLKLHTHSYCCLDYAQIY 682
            FFEEEK++TRDHR+ETAKGAKI+SAAVAATADG    KEGE+K+KLHTHSYCCLDYAQIY
Sbjct: 74   FFEEEKIITRDHRRETAKGAKIYSAAVAATADGQQTAKEGEEKVKLHTHSYCCLDYAQIY 133

Query: 681  DVVRYRMHRMKKKLKDELENRNTVQEYICPNCNRRYTALDALRLISPNDEYFHCENCDTV 502
            DV+RYR+HRMK KLKDELEN+NT+QEYICPNC +RY ALDALRL+S  DE FHCE+C+  
Sbjct: 134  DVIRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSFEDEDFHCESCNGR 193

Query: 501  LVAASDKLAADEIGDGDDNARSRRLEKLKDILQKMDVQLKPLMEQLARIKDLPAPEFGSL 322
            L   SDK+AA E GDGDDNAR RR EKLKD+LQKM+VQLKPLM+QL+R+KDLP PEFGSL
Sbjct: 194  LEVESDKIAAQERGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSL 253

Query: 321  QAWE-XXXXXXXXANGDSSTNDPSKSSLGQGYGGTPMPYLGETKVEVALSGV-KEEDVKP 148
            QAWE         ANGD +  D   S    GY G  +PY G+TKV V  +   K E VK 
Sbjct: 254  QAWEARASAAVRAANGDINAGDSKISQ--PGYNG--VPYSGDTKVVVDFNTEGKGEGVKS 309

Query: 147  DTGITSRKVLPPWMIKQGMLLTNEQRGEVKQESKMD--SSSGPIDRSDDKK 1
            +T  TS KVLPPWMI  GM LT EQRGEVKQE+KMD  S+S     +DDKK
Sbjct: 310  ETDSTSLKVLPPWMITSGMNLTKEQRGEVKQETKMDGTSTSTAAQYTDDKK 360