BLASTX nr result

ID: Coptis24_contig00011181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011181
         (1928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133912.1| PREDICTED: transducin beta-like protein 2-li...   630   e-178
ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [V...   614   e-173
ref|XP_002511720.1| nucleotide binding protein, putative [Ricinu...   608   e-171
ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|2...   607   e-171
ref|XP_003552339.1| PREDICTED: uncharacterized protein LOC100306...   594   e-167

>ref|XP_004133912.1| PREDICTED: transducin beta-like protein 2-like [Cucumis sativus]
            gi|449528295|ref|XP_004171140.1| PREDICTED: transducin
            beta-like protein 2-like [Cucumis sativus]
          Length = 434

 Score =  630 bits (1625), Expect = e-178
 Identities = 306/409 (74%), Positives = 350/409 (85%), Gaps = 1/409 (0%)
 Frame = +1

Query: 85   FSDYFRKKKSIVKPDTGNEAVQKSKKGSQ-FNSKKTHFKPHSHGSDKDQVKRHHPLDVNT 261
            F  YFRK++S V+  +  E     KK  +   +KK+H KPHSH S+KDQ K+HHPLD+NT
Sbjct: 23   FGSYFRKRRSEVQTISHPELPSDPKKHQKPSQTKKSHSKPHSHSSEKDQNKKHHPLDLNT 82

Query: 262  LKGHGDSVTALSFSSDACNLATACADGVVRVFKLDDASSKSFKFLRINLPAGSHPTAISF 441
            LKGHGDSVT L FSSD  NLATACADGV+RVFKLDDASSKSFKFLRINLPAG HPTA+ F
Sbjct: 83   LKGHGDSVTGLCFSSDGSNLATACADGVIRVFKLDDASSKSFKFLRINLPAGGHPTAVMF 142

Query: 442  SDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQTKLPLPEIKWEQHKVHDKRAILNL 621
             D+ TS++V++ GLSGSSLYMYGE  AK   E K+Q KLPLPEIKWEQHKVHDK++++ L
Sbjct: 143  GDDATSIIVSSQGLSGSSLYMYGEEKAKPSGETKQQAKLPLPEIKWEQHKVHDKKSVITL 202

Query: 622  VGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQLKNHMATVSRNGRFLAA 801
            VG TASYG+ADGSTI+ASCSEGTDI L H K+GK++G+VDTNQLKN MAT+S NGRF+AA
Sbjct: 203  VGATASYGSADGSTIVASCSEGTDIRLWHAKTGKLVGDVDTNQLKNTMATLSPNGRFIAA 262

Query: 802  AAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTPSSEQIITASKDGSIRIW 981
            AAFTADVKVWE+VYSKDGSVKEV + MQLKGHKSAVTWLCFTP+SEQIITASKDGS+RIW
Sbjct: 263  AAFTADVKVWEVVYSKDGSVKEVLRVMQLKGHKSAVTWLCFTPNSEQIITASKDGSMRIW 322

Query: 982  NINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKVLAATHGSTLQWLCAETG 1161
            NINVRY LDEDPKTLKVFPIPL DSKG+ +HYD L+ISPDGK+LAATHGSTLQWLC ETG
Sbjct: 323  NINVRYHLDEDPKTLKVFPIPLHDSKGATVHYDHLNISPDGKILAATHGSTLQWLCVETG 382

Query: 1162 KVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKVKLWVAP 1308
            KVLDTA+KAH+G+IT I+WA + IP G    MVLAT+SVDKKVKLW AP
Sbjct: 383  KVLDTAEKAHDGDITWISWAPKPIPSGVKKVMVLATASVDKKVKLWAAP 431


>ref|XP_002279016.1| PREDICTED: transducin beta-like protein 2 [Vitis vinifera]
          Length = 439

 Score =  614 bits (1583), Expect = e-173
 Identities = 306/410 (74%), Positives = 345/410 (84%), Gaps = 4/410 (0%)
 Frame = +1

Query: 91   DYFRKKKS----IVKPDTGNEAVQKSKKGSQFNSKKTHFKPHSHGSDKDQVKRHHPLDVN 258
            +YF K++S    I KP+  ++   K  K  Q  SKK+ FK HSH +DKDQ KRHHPLD+N
Sbjct: 25   NYFLKRRSEVESIFKPELQSDKNPKPAKPPQSFSKKSQFKHHSHAADKDQNKRHHPLDIN 84

Query: 259  TLKGHGDSVTALSFSSDACNLATACADGVVRVFKLDDASSKSFKFLRINLPAGSHPTAIS 438
            TLKGHGDSV  L FS D  NLATACADGVVRV+KLDDASSKSFKFLRIN+P G HPTA++
Sbjct: 85   TLKGHGDSVNGLCFSPDGRNLATACADGVVRVYKLDDASSKSFKFLRINVPLGGHPTAVT 144

Query: 439  FSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQTKLPLPEIKWEQHKVHDKRAILN 618
            F D+ +S+VVA+  LSG SL+M+G+  AKT NE K+  K P+PEIKWE+ KVHDKRAIL 
Sbjct: 145  FGDDSSSVVVASQTLSGCSLFMFGDERAKTANETKQPAKPPVPEIKWERLKVHDKRAILT 204

Query: 619  LVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQLKNHMATVSRNGRFLA 798
            L GTTASYG+ADGSTII SCSEGTDI+L HGK+GK LG+VDTNQLKN+MA VS NGRF+A
Sbjct: 205  LFGTTASYGSADGSTIIVSCSEGTDIMLWHGKTGKNLGHVDTNQLKNNMAAVSPNGRFIA 264

Query: 799  AAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTPSSEQIITASKDGSIRI 978
            AAAFTADVKVWEIVYSKDGSVKEV+  MQLKGHKSAVTWLCFTP+SEQIITASKDGSIR 
Sbjct: 265  AAAFTADVKVWEIVYSKDGSVKEVSNVMQLKGHKSAVTWLCFTPNSEQIITASKDGSIRT 324

Query: 979  WNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKVLAATHGSTLQWLCAET 1158
            WNINVRY LDEDPKTLKVFPIPL DS GS + YDRLSISPDGK+LAATHGSTLQWLC ET
Sbjct: 325  WNINVRYHLDEDPKTLKVFPIPLHDSSGSTLLYDRLSISPDGKILAATHGSTLQWLCTET 384

Query: 1159 GKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKVKLWVAP 1308
            GKVLDTADKAH+G+IT IAWA   +P+G   ++VLATSSVDKKVKLWVAP
Sbjct: 385  GKVLDTADKAHDGDITCIAWAPEHLPIGDQKSLVLATSSVDKKVKLWVAP 434


>ref|XP_002511720.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223548900|gb|EEF50389.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 438

 Score =  608 bits (1569), Expect = e-171
 Identities = 299/413 (72%), Positives = 347/413 (84%), Gaps = 3/413 (0%)
 Frame = +1

Query: 85   FSDYFRKKKSIVK---PDTGNEAVQKSKKGSQFNSKKTHFKPHSHGSDKDQVKRHHPLDV 255
            F  YF K+KS +K   P       +K  K SQ  +KK+H KPHSH +DK+Q +RHHPLD+
Sbjct: 23   FKSYFLKRKSEIKSIAPPELRSDPKKPTKHSQPVTKKSHSKPHSHAADKEQNRRHHPLDL 82

Query: 256  NTLKGHGDSVTALSFSSDACNLATACADGVVRVFKLDDASSKSFKFLRINLPAGSHPTAI 435
            NTLKGHGD+VT L FS+D  +LATACADGVVRVFKLDDASS+SFKFLRINLPAG  P A+
Sbjct: 83   NTLKGHGDAVTGLCFSNDGRSLATACADGVVRVFKLDDASSRSFKFLRINLPAGGIPVAV 142

Query: 436  SFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQTKLPLPEIKWEQHKVHDKRAIL 615
            +FSD+ +S+VVA+  LSG+SLY+YGE N K  N+ K+Q KLPLPEIKWE  K+H+ +A++
Sbjct: 143  TFSDDASSVVVASQTLSGASLYLYGEENPKPSNDSKQQPKLPLPEIKWEHRKIHENKAVI 202

Query: 616  NLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQLKNHMATVSRNGRFL 795
             LVGT A+YG+ADGS+I+ASCSEGTDI L HGK+G ILGNVDTNQLKN MA +S NGRF+
Sbjct: 203  TLVGTVATYGSADGSSIVASCSEGTDIKLWHGKTGNILGNVDTNQLKNTMAAISPNGRFV 262

Query: 796  AAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTPSSEQIITASKDGSIR 975
            AAAAFTADVKVWEI+YSKDGSVKEV K MQLKGHKSAVTWLCFT +SEQIITASKDGSIR
Sbjct: 263  AAAAFTADVKVWEIIYSKDGSVKEVPKVMQLKGHKSAVTWLCFTSNSEQIITASKDGSIR 322

Query: 976  IWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKVLAATHGSTLQWLCAE 1155
            IWNINVRY LDEDPKTLKVFPIPL DS  + +HYDRLS+SPDGK+LAAT+GSTLQWLC E
Sbjct: 323  IWNINVRYHLDEDPKTLKVFPIPLHDSHDATLHYDRLSLSPDGKILAATNGSTLQWLCVE 382

Query: 1156 TGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKVKLWVAPVI 1314
            TGKVLDTADKAH+G+IT IAWA ++IP G   AMVLAT+SVDKKVKLW AP +
Sbjct: 383  TGKVLDTADKAHDGQITWIAWAPKTIPNGDGQAMVLATASVDKKVKLWAAPSV 435


>ref|XP_002301292.1| predicted protein [Populus trichocarpa] gi|222843018|gb|EEE80565.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  607 bits (1564), Expect = e-171
 Identities = 299/413 (72%), Positives = 345/413 (83%), Gaps = 5/413 (1%)
 Frame = +1

Query: 85   FSDYFRKKKS----IVKPDTGNEAVQKSKKGSQFNSKKTHFKPHSHGS-DKDQVKRHHPL 249
            F +YF K+KS    I +P    +  +K  K +   S+K H KPHSH S DKD  K+HHPL
Sbjct: 23   FKNYFLKRKSEIGSISEPGLHPDLHKKPPKPTH-QSRKPHSKPHSHASSDKDHNKKHHPL 81

Query: 250  DVNTLKGHGDSVTALSFSSDACNLATACADGVVRVFKLDDASSKSFKFLRINLPAGSHPT 429
            D+NTLKGHGDSV+ L FS D  +LATACADGVVRVFKLDDASSKSFKFLRIN+PAG HP 
Sbjct: 82   DLNTLKGHGDSVSGLCFSYDGRSLATACADGVVRVFKLDDASSKSFKFLRINVPAGGHPV 141

Query: 430  AISFSDEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQTKLPLPEIKWEQHKVHDKRA 609
            A++FSD+ +S+VVA+  LSGSSLYM+GE   K  ++ K+Q KLPLP+IKWE HK+H+KRA
Sbjct: 142  AVAFSDDASSVVVASQTLSGSSLYMWGEEKVKATDDSKQQPKLPLPDIKWEHHKIHEKRA 201

Query: 610  ILNLVGTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQLKNHMATVSRNGR 789
            +L LVGT ++YG+ DGSTI+ASCSEGTDI + HGK+GK+LGNVDTNQLKN+MAT+S NGR
Sbjct: 202  VLTLVGTASTYGSGDGSTIVASCSEGTDIKIWHGKTGKVLGNVDTNQLKNNMATISPNGR 261

Query: 790  FLAAAAFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTPSSEQIITASKDGS 969
            F+AAAAFTADVKVWEIVYSKDGSVKEV KAMQLKGHKSAVTWLCFTP SEQIITASKDGS
Sbjct: 262  FIAAAAFTADVKVWEIVYSKDGSVKEVPKAMQLKGHKSAVTWLCFTPDSEQIITASKDGS 321

Query: 970  IRIWNINVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKVLAATHGSTLQWLC 1149
            IRIWNINVRY LDEDPKTLKVFPIPL DS G+ +HYDRLS+SPDG++LAATHGS LQWLC
Sbjct: 322  IRIWNINVRYHLDEDPKTLKVFPIPLHDSNGATLHYDRLSLSPDGRILAATHGSMLQWLC 381

Query: 1150 AETGKVLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKVKLWVAP 1308
             ETGKVLDTAD AH G+IT IAWA + +P G   + VLAT+SVDKKVKLW AP
Sbjct: 382  VETGKVLDTADNAHNGDITWIAWAPKPMPAGDGRSFVLATASVDKKVKLWAAP 434


>ref|XP_003552339.1| PREDICTED: uncharacterized protein LOC100306508 [Glycine max]
          Length = 429

 Score =  594 bits (1532), Expect = e-167
 Identities = 295/413 (71%), Positives = 343/413 (83%)
 Frame = +1

Query: 85   FSDYFRKKKSIVKPDTGNEAVQKSKKGSQFNSKKTHFKPHSHGSDKDQVKRHHPLDVNTL 264
            FS Y+RK++S ++          S K      KK   KPHS  SDKDQ KRHHPLD+NTL
Sbjct: 23   FSTYYRKRQSEIQSIADPNPKPLSSKAPP---KKPLSKPHS--SDKDQNKRHHPLDLNTL 77

Query: 265  KGHGDSVTALSFSSDACNLATACADGVVRVFKLDDASSKSFKFLRINLPAGSHPTAISFS 444
            KGHGD+VT + FS D  NLATACADGVVRVFKLDDASSKSFKFLRINLPAG HPTA++FS
Sbjct: 78   KGHGDAVTGICFSPDGRNLATACADGVVRVFKLDDASSKSFKFLRINLPAGGHPTAVAFS 137

Query: 445  DEKTSLVVAAHGLSGSSLYMYGEGNAKTDNEPKEQTKLPLPEIKWEQHKVHDKRAILNLV 624
            D+ +S+VVA++ LSG SLYMYGE   KT +E K QTKLPLPEIKWE HKVHDK++I+ + 
Sbjct: 138  DDASSIVVASYTLSGCSLYMYGEEKPKT-SEDKPQTKLPLPEIKWEHHKVHDKKSIITMF 196

Query: 625  GTTASYGTADGSTIIASCSEGTDIILLHGKSGKILGNVDTNQLKNHMATVSRNGRFLAAA 804
            G +A+YGTADGSTI+ASCSEGTDIIL HGK+GK +G+VDTNQLKN+MAT+S NGRF+AAA
Sbjct: 197  GASATYGTADGSTIVASCSEGTDIILWHGKTGKSVGHVDTNQLKNNMATISPNGRFIAAA 256

Query: 805  AFTADVKVWEIVYSKDGSVKEVTKAMQLKGHKSAVTWLCFTPSSEQIITASKDGSIRIWN 984
            AFTADVK+WEIVY+KDGSVKEV   MQLKGHKSAVTWLCF P+SEQIITASKDGS+R+WN
Sbjct: 257  AFTADVKIWEIVYAKDGSVKEVLNVMQLKGHKSAVTWLCFMPNSEQIITASKDGSMRLWN 316

Query: 985  INVRYQLDEDPKTLKVFPIPLCDSKGSPMHYDRLSISPDGKVLAATHGSTLQWLCAETGK 1164
            INVRY LDEDPKTLKVF IPL DS G+ +HYDRLS+SPDGK+LAATHGSTLQWLC ETGK
Sbjct: 317  INVRYHLDEDPKTLKVFLIPLHDSSGTTLHYDRLSVSPDGKILAATHGSTLQWLCVETGK 376

Query: 1165 VLDTADKAHEGEITGIAWASRSIPLGGALAMVLATSSVDKKVKLWVAPVIHPS 1323
            VLDTA+KAH+ +I+ I+WA + IP+G    +VLAT+S DKKVKLW +P I  S
Sbjct: 377  VLDTAEKAHDSDISCISWAPKPIPMGNEQVLVLATASADKKVKLWASPSIPSS 429


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