BLASTX nr result

ID: Coptis24_contig00011179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011179
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530850.1| Synaptic glycoprotein SC2, putative [Ricinus...   553   e-155
emb|CAN83052.1| hypothetical protein VITISV_043115 [Vitis vinifera]   549   e-154
gb|ABV60089.1| trans-2-enoyl-CoA reductase [Gossypium hirsutum]       539   e-151
ref|XP_004142757.1| PREDICTED: very-long-chain enoyl-CoA reducta...   538   e-150
ref|XP_002311166.1| predicted protein [Populus trichocarpa] gi|1...   535   e-150

>ref|XP_002530850.1| Synaptic glycoprotein SC2, putative [Ricinus communis]
            gi|223529574|gb|EEF31524.1| Synaptic glycoprotein SC2,
            putative [Ricinus communis]
          Length = 310

 Score =  553 bits (1425), Expect = e-155
 Identities = 256/303 (84%), Positives = 282/303 (93%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1194 MKVSVVSRSGREVIKGGVELNDSANVSDLQEAIYRKTKKYYPSRQRLTLPLRPGSKEKAV 1015
            MKV+VVSRSGREVIKGG++LNDSA V+DLQEAI+++TKK+YPSRQRLTLPL PGSK++  
Sbjct: 1    MKVTVVSRSGREVIKGGLDLNDSATVADLQEAIHKRTKKFYPSRQRLTLPLPPGSKDRPT 60

Query: 1014 VLNAKKSLQDYCDGSGDNLTVVFKDLGTQVSYKTLFFFEYLGPLIIYPIFYHLPVYRFFG 835
            VLN KKSL+DYCDG+ DN+TVVFKDLG QVSY+TLFFFEYLGPLI+YP+FY  PVY++FG
Sbjct: 61   VLNYKKSLKDYCDGNSDNITVVFKDLGPQVSYRTLFFFEYLGPLILYPVFYFFPVYKYFG 120

Query: 834  YKGERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCVYYWTFGAYVA 655
            YK ERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNC YYWTFG+Y+A
Sbjct: 121  YKEERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGSYIA 180

Query: 654  YYVNHPLYTPVNDLQVKIGLGFGLISQVLNFYCHLLLRNLRS-DGKGGYQIPRGFLFNIV 478
            YYVNHPLYTPV DLQ+KIG GFGLI Q+ NFYCH+LL+NLRS DG GGYQIP GFLFNIV
Sbjct: 181  YYVNHPLYTPVGDLQMKIGFGFGLICQIANFYCHILLKNLRSPDGSGGYQIPHGFLFNIV 240

Query: 477  TCANYTTEIYQWLGFNIATQTVAGYVFLVVAASIMTNWALAKHRRLVKLFDGKEGRAKYP 298
            TCANYTTEIYQWLGFNIATQTVAGY+FLVVAASIMTNWALAKHRRL KLFDGK+GR KYP
Sbjct: 241  TCANYTTEIYQWLGFNIATQTVAGYIFLVVAASIMTNWALAKHRRLRKLFDGKDGRPKYP 300

Query: 297  WRW 289
             RW
Sbjct: 301  RRW 303


>emb|CAN83052.1| hypothetical protein VITISV_043115 [Vitis vinifera]
          Length = 310

 Score =  549 bits (1414), Expect = e-154
 Identities = 254/303 (83%), Positives = 283/303 (93%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1194 MKVSVVSRSGREVIKGGVELNDSANVSDLQEAIYRKTKKYYPSRQRLTLPLRPGSKEKAV 1015
            MKV+VV+RSGRE+IKGG+EL++SA V DLQEAI+R+TKKYYPSRQRLTLPL+PGSKE+ V
Sbjct: 1    MKVTVVTRSGRELIKGGLELDESATVVDLQEAIHRRTKKYYPSRQRLTLPLQPGSKERPV 60

Query: 1014 VLNAKKSLQDYCDGSGDNLTVVFKDLGTQVSYKTLFFFEYLGPLIIYPIFYHLPVYRFFG 835
             LN KKS++DYCDG+  NLTVVFKDLG Q+SY+TLFF+EYLGPL+IYPIFY  PVY++FG
Sbjct: 61   ALNYKKSVKDYCDGNSSNLTVVFKDLGPQISYRTLFFWEYLGPLLIYPIFYFFPVYQYFG 120

Query: 834  YKGERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCVYYWTFGAYVA 655
            YKGER+IHPVQTYA+YYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNC YYWTFG+Y+A
Sbjct: 121  YKGERLIHPVQTYALYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGSYIA 180

Query: 654  YYVNHPLYTPVNDLQVKIGLGFGLISQVLNFYCHLLLRNLRS-DGKGGYQIPRGFLFNIV 478
            YYVNHPLYTPV+DLQ+KIG GFGL+ QV NFYCH+LLRNLRS DG GGYQIP GFLFNIV
Sbjct: 181  YYVNHPLYTPVSDLQMKIGFGFGLVCQVTNFYCHILLRNLRSPDGNGGYQIPHGFLFNIV 240

Query: 477  TCANYTTEIYQWLGFNIATQTVAGYVFLVVAASIMTNWALAKHRRLVKLFDGKEGRAKYP 298
            TCANYTTEIYQW+GFNIATQTVAGYVFLVVAA+IMTNWALAKHRRL KLFDGKEGR KYP
Sbjct: 241  TCANYTTEIYQWVGFNIATQTVAGYVFLVVAAAIMTNWALAKHRRLRKLFDGKEGRPKYP 300

Query: 297  WRW 289
             RW
Sbjct: 301  RRW 303


>gb|ABV60089.1| trans-2-enoyl-CoA reductase [Gossypium hirsutum]
          Length = 310

 Score =  539 bits (1388), Expect = e-151
 Identities = 245/303 (80%), Positives = 282/303 (93%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1194 MKVSVVSRSGREVIKGGVELNDSANVSDLQEAIYRKTKKYYPSRQRLTLPLRPGSKEKAV 1015
            MKV++VSRSGRE IKGG+ELNDSA V+DLQEAI+++TKK+YPSRQRLTLP+  GS+E+ V
Sbjct: 1    MKVTLVSRSGREFIKGGLELNDSATVADLQEAIHKRTKKFYPSRQRLTLPVPSGSRERPV 60

Query: 1014 VLNAKKSLQDYCDGSGDNLTVVFKDLGTQVSYKTLFFFEYLGPLIIYPIFYHLPVYRFFG 835
            +LN KKSL+DYCDG+ + LT+VFKDLG QVSY+TLFFFEYLGPLI+YP+FY+ PVY++FG
Sbjct: 61   ILNYKKSLKDYCDGNENTLTIVFKDLGPQVSYRTLFFFEYLGPLILYPVFYYFPVYKYFG 120

Query: 834  YKGERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCVYYWTFGAYVA 655
            Y+ +RVIHPVQTYA+YYWCFHYFKRIMETFF+HRFSHATSPLSNVFRNC YYWTFG+Y+A
Sbjct: 121  YEEKRVIHPVQTYALYYWCFHYFKRIMETFFIHRFSHATSPLSNVFRNCAYYWTFGSYIA 180

Query: 654  YYVNHPLYTPVNDLQVKIGLGFGLISQVLNFYCHLLLRNLRS-DGKGGYQIPRGFLFNIV 478
            YYVNHPLYTPV+DLQ+KIG GFG++ Q+ NFYCH++L+NLRS DG GGYQIPRGFLFNIV
Sbjct: 181  YYVNHPLYTPVSDLQMKIGFGFGIVCQLANFYCHIILKNLRSPDGSGGYQIPRGFLFNIV 240

Query: 477  TCANYTTEIYQWLGFNIATQTVAGYVFLVVAASIMTNWALAKHRRLVKLFDGKEGRAKYP 298
            TCANYTTEIYQWLGFNIATQTVAGYVFLVVA SIMTNWALAKHRRL KLFDGK+GR KYP
Sbjct: 241  TCANYTTEIYQWLGFNIATQTVAGYVFLVVATSIMTNWALAKHRRLKKLFDGKDGRPKYP 300

Query: 297  WRW 289
             RW
Sbjct: 301  RRW 303


>ref|XP_004142757.1| PREDICTED: very-long-chain enoyl-CoA reductase-like [Cucumis sativus]
            gi|449483843|ref|XP_004156709.1| PREDICTED:
            very-long-chain enoyl-CoA reductase-like [Cucumis
            sativus]
          Length = 310

 Score =  538 bits (1385), Expect = e-150
 Identities = 247/303 (81%), Positives = 281/303 (92%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1194 MKVSVVSRSGREVIKGGVELNDSANVSDLQEAIYRKTKKYYPSRQRLTLPLRPGSKEKAV 1015
            MKVSVVSRSGREV+KGG++L+DSA+V+DLQ+AI+++TKK+YP+RQRLTLP++PGSKE+  
Sbjct: 1    MKVSVVSRSGREVVKGGIQLSDSASVADLQDAIHKRTKKFYPARQRLTLPVQPGSKERPT 60

Query: 1014 VLNAKKSLQDYCDGSGDNLTVVFKDLGTQVSYKTLFFFEYLGPLIIYPIFYHLPVYRFFG 835
            VLN+KKSL++YC  + D++TVVFKDLG QVSY+TLFFFEYLGPLI+YPIFY+ PVY+FFG
Sbjct: 61   VLNSKKSLREYCSDNSDSITVVFKDLGPQVSYRTLFFFEYLGPLILYPIFYYFPVYQFFG 120

Query: 834  YKGERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCVYYWTFGAYVA 655
            YK ERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNC YYW+FG+Y+A
Sbjct: 121  YKAERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWSFGSYIA 180

Query: 654  YYVNHPLYTPVNDLQVKIGLGFGLISQVLNFYCHLLLRNLRS-DGKGGYQIPRGFLFNIV 478
            YYVNHPLYTPV DLQ+KIG  FGL+ QV NFYCH+LLR LRS +G GGYQIP+GFLFNIV
Sbjct: 181  YYVNHPLYTPVGDLQMKIGFAFGLLCQVSNFYCHILLRKLRSPEGNGGYQIPKGFLFNIV 240

Query: 477  TCANYTTEIYQWLGFNIATQTVAGYVFLVVAASIMTNWALAKHRRLVKLFDGKEGRAKYP 298
            TCANYTTEIYQW+GFNIATQT AGYVFLVVAA IMTNWALAKHRRL KLFDGKEGR KYP
Sbjct: 241  TCANYTTEIYQWVGFNIATQTFAGYVFLVVAALIMTNWALAKHRRLKKLFDGKEGRPKYP 300

Query: 297  WRW 289
             RW
Sbjct: 301  RRW 303


>ref|XP_002311166.1| predicted protein [Populus trichocarpa] gi|118485224|gb|ABK94472.1|
            unknown [Populus trichocarpa] gi|118487624|gb|ABK95637.1|
            unknown [Populus trichocarpa] gi|222850986|gb|EEE88533.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  535 bits (1379), Expect = e-150
 Identities = 246/303 (81%), Positives = 279/303 (92%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1194 MKVSVVSRSGREVIKGGVELNDSANVSDLQEAIYRKTKKYYPSRQRLTLPLRPGSKEKAV 1015
            MKV+VVSRSGREVIKGG+EL+DSA V+DLQEAI+++TKK+YP+RQRLTLPL PGSKE+  
Sbjct: 1    MKVTVVSRSGREVIKGGLELSDSATVADLQEAIHKRTKKFYPARQRLTLPLPPGSKERPT 60

Query: 1014 VLNAKKSLQDYCDGSGDNLTVVFKDLGTQVSYKTLFFFEYLGPLIIYPIFYHLPVYRFFG 835
            VLN KK+L++Y DG+ D+LT++FKDLG QVSY+TLFFFEYLGPL++YP FY+ PVY+F G
Sbjct: 61   VLNYKKNLKEYQDGNLDSLTILFKDLGPQVSYRTLFFFEYLGPLVLYPFFYYFPVYQFLG 120

Query: 834  YKGERVIHPVQTYAMYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCVYYWTFGAYVA 655
            YKGE ++HPVQTYA+YYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNC YYWTFG+Y+A
Sbjct: 121  YKGEHIMHPVQTYALYYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGSYIA 180

Query: 654  YYVNHPLYTPVNDLQVKIGLGFGLISQVLNFYCHLLLRNL-RSDGKGGYQIPRGFLFNIV 478
            YYVNHPLYTPV DLQ+KIG GFGL+ Q+ NFYCH+LLRNL R DG GGYQIP GFLFNIV
Sbjct: 181  YYVNHPLYTPVGDLQMKIGFGFGLVCQLANFYCHILLRNLRRPDGNGGYQIPSGFLFNIV 240

Query: 477  TCANYTTEIYQWLGFNIATQTVAGYVFLVVAASIMTNWALAKHRRLVKLFDGKEGRAKYP 298
            TCANYTTEIYQWLGFNIATQTVAGY+FLVVAASIMTNWALAKHRRL KLFDGK+GR KYP
Sbjct: 241  TCANYTTEIYQWLGFNIATQTVAGYIFLVVAASIMTNWALAKHRRLKKLFDGKDGRPKYP 300

Query: 297  WRW 289
             RW
Sbjct: 301  RRW 303


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