BLASTX nr result

ID: Coptis24_contig00011176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00011176
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241...   150   2e-34
ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|2...   140   3e-31
ref|XP_003554167.1| PREDICTED: uncharacterized protein LOC100784...   133   3e-29
ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213...   130   3e-28
ref|XP_003625126.1| hypothetical protein MTR_7g091260 [Medicago ...   127   3e-27

>ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241601 [Vitis vinifera]
           gi|297742241|emb|CBI34390.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score =  150 bits (380), Expect = 2e-34
 Identities = 70/95 (73%), Positives = 77/95 (81%)
 Frame = +1

Query: 139 MGSQFGDWPSFNPHNFSQLRPSDPLIPSELTAATYHPTHDRTSAPPDQVIATEATNILLR 318
           MGS  GDWPSF+PHNFSQLRPSDP  PS++  ATYHPTHDRT  PPDQVI+TE  NILLR
Sbjct: 1   MGSTLGDWPSFDPHNFSQLRPSDPSNPSKMIPATYHPTHDRTLPPPDQVISTETKNILLR 60

Query: 319 KFYQHAEDKFRPKRSASENLTPGHGRKQPRGSPKD 423
            FYQ AE+K RPKR+ASE+LTP HG KQPR S  D
Sbjct: 61  HFYQRAEEKLRPKRAASEHLTPEHGCKQPRASASD 95


>ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|222845269|gb|EEE82816.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  140 bits (353), Expect = 3e-31
 Identities = 66/92 (71%), Positives = 73/92 (79%)
 Frame = +1

Query: 139 MGSQFGDWPSFNPHNFSQLRPSDPLIPSELTAATYHPTHDRTSAPPDQVIATEATNILLR 318
           MGS  GDWPSF+PHNFSQLRPSDP  PS++T ATYHPTH RT  PPDQVI TEA NILLR
Sbjct: 1   MGSLLGDWPSFDPHNFSQLRPSDPSNPSKMTPATYHPTHSRTLPPPDQVITTEAKNILLR 60

Query: 319 KFYQHAEDKFRPKRSASENLTPGHGRKQPRGS 414
            FY+ AE+K R KR+ASE+L P HG KQ R S
Sbjct: 61  NFYERAEEKLRQKRAASEHLMPEHGCKQARAS 92


>ref|XP_003554167.1| PREDICTED: uncharacterized protein LOC100784555 [Glycine max]
          Length = 93

 Score =  133 bits (335), Expect = 3e-29
 Identities = 62/92 (67%), Positives = 71/92 (77%)
 Frame = +1

Query: 139 MGSQFGDWPSFNPHNFSQLRPSDPLIPSELTAATYHPTHDRTSAPPDQVIATEATNILLR 318
           M S  G+WPSF+PHNFSQLRPSDP   S +T  TYHPTH RT   PDQVI+TEA NIL+R
Sbjct: 1   MDSLLGNWPSFDPHNFSQLRPSDPSSSSRMTLPTYHPTHSRTLPAPDQVISTEAKNILVR 60

Query: 319 KFYQHAEDKFRPKRSASENLTPGHGRKQPRGS 414
             YQHAE+K +PKR+AS+NL P HG KQPR S
Sbjct: 61  HIYQHAEEKLKPKRAASDNLLPDHGCKQPRVS 92


>ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213287 [Cucumis sativus]
           gi|449519112|ref|XP_004166579.1| PREDICTED:
           uncharacterized LOC101213287 [Cucumis sativus]
          Length = 98

 Score =  130 bits (327), Expect = 3e-28
 Identities = 61/92 (66%), Positives = 69/92 (75%)
 Frame = +1

Query: 139 MGSQFGDWPSFNPHNFSQLRPSDPLIPSELTAATYHPTHDRTSAPPDQVIATEATNILLR 318
           MGS  GD PS++PHNFSQLRPSDP  PS++  ATYHPTH RT  PPDQVI TEA NIL+R
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 319 KFYQHAEDKFRPKRSASENLTPGHGRKQPRGS 414
             YQH E+K R KR A+E+  P HG KQPR S
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRAS 92


>ref|XP_003625126.1| hypothetical protein MTR_7g091260 [Medicago truncatula]
           gi|355500141|gb|AES81344.1| hypothetical protein
           MTR_7g091260 [Medicago truncatula]
           gi|388504876|gb|AFK40504.1| unknown [Medicago
           truncatula]
          Length = 93

 Score =  127 bits (318), Expect = 3e-27
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = +1

Query: 139 MGSQFGDWPSFNPHNFSQLRPSDPLIPSELTAATYHPTHDRTSAPPDQVIATEATNILLR 318
           M S  G+ PS+NPHNFSQ+RPSDP   S++T  TYHPTHDRT  PPDQVI TEA NILLR
Sbjct: 1   MDSVLGNLPSYNPHNFSQIRPSDPSSSSKMTITTYHPTHDRTLPPPDQVINTEAKNILLR 60

Query: 319 KFYQHAEDKFRPKRSASENLTPGHGRKQPRGS 414
             YQ+A +K +PKR+A+ NL P HG KQPR S
Sbjct: 61  HIYQNAREKLKPKRAAAGNLLPEHGCKQPRVS 92


Top